XLOC_011689 (gene) - C. hemisphaerica

Overview
NameXLOC_011689
Unique NameXLOC_011689
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000371:25190..28661-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011689 ID=XLOC_011689|Name=XLOC_011689|organism=Clytia hemisphaerica|type=gene|length=3472bp|location=Sequence derived from alignment at sc0000371:25190..28661- (Clytia hemisphaerica)
TTGAAACTCAAACATAACAGAATTGACAAAGTAACAGACACATCTTCGTC
TCAAAAAATTTGTAAAGCTAAACTTAAAAAAAATCTTGCACATTTTTTTA
CAAATTGTGTTTAAGCCTTTTTGAGCTGTTGGAACAAAAAGAAGCTTTTT
ATCAAAAGGACGACACTTTCTTTAGATAACGGTATGAGCTATTATGATAT
TAAAGAAATATTTTTTCTTAACAACTGTTTAACCATAAGAATCAGTAAGC
TAAGAACGTGTTATAGTTGTTTTAACCAACCTCGTTGATACTAAGAGTTG
TATTCGAAAAGGATATATGAAGTTGGTGCAAAGTGTTGGTTCTAACAGGA
AATCAGTACGCTAACCTAATGCCTAAAATTGGTAATAACCTTTCAAAGAC
GTTGTAAAGGAAATCCTAGGGAAGACAAATATCGAATTTTAAATTTTTTT
ATAAGAATTTTAACTATGGTACAATGAGTAATCTGCCTTGCTTAATGTAA
GTTTTTGAAGAGCTGTGGTTTACTTTTAAAAGGAATTTTAGTTTTTATTG
TCTATTTTGTCTTAAAACTTACGATTAAGAGTTTTACTATCAACCCATTT
TTCAACCCTGTTTTTTCTCGCTCTTTTCTCAGTCACTCAATCAAACACAA
TAAAAATTGTCAATATTCGAATAGACAAATAAAGGACCGTTGCTTATTAG
TTTTTTTATAAGCACATTTTGAACAATCTTTGGAGGGGTTTAAGAAATTC
TTACGAGACTTTCACTTGAGATTTCGTTTCAACATATTTAGATCCTTTCG
CGTTTATTTAACTTTTGTGACCTAGTGTCTTCAGTAAAGCATAAACTTAA
CTCCCTTGTCTCATTTTTGTGAGCTAGTATCTTCAGTAAAGATAAAATTA
CTTCCTTTTCTCAAACTCCCTTTTTGGGAGTTACATAACGTGCGACTTGA
TATTTTGGNTTTTCTCAAACTCCCTTTTTGGGAGTTACTTAACGTGCGAC
TTGATATTTTGTAGAATAAGATGAACAAATGGCTGAATATTTGTCTTTTG
ATCTAAGGCCTTAAAAAGGAATATCGTATCCAGCTGGCCAAAAACATGTT
CACTTATTTGCTCGGATCTAATCGCTCACTTGCCTGAAAGGATTACCTGG
AGTCGAATCATTATTAGCGATATTATATTTATTTAGCCATCTTCTCTTAA
GTCTAACTTCTTATAAAATTAGTTAATCTTATAACTAAAGGATAGAGCGA
TTAACATAACGACGTCTGTTATTTAGCTTTTGATTATAAAAGAATGACAC
AAAGGTAATTTGATGACGGTGACGATGAAATGACATATTTTCTATCTCTT
TAAAAACAATGAACTGCTTTCAACCACTCCTCACCTCTGTACTGCGCATG
TCCTTAAAAGACCGTTTTTTCTTACTTCACCTTATTAGGTGATTTTTTAT
AAATAAACAAATGGGCTTGTCATTCGTATGTTGTCAGAATAAAAAGCAGT
GATTTTTGAAGGGTTGAATTATTCCTCTTGGATATCTTCGAACTATCAAG
ACATAAGTCGAAACATTTCTGTCTTTTCTTAGACATCTAACACAAATTCA
TATACAAAATGGCTGAAGATGATGTTGCCGCTCTCGTCGTAGACAATGGA
TCTGGTATGTGCAAAGCTGGATTTGCTGGAGATGATGCTCCAAGAGCTGT
CTTCCCCTCCATTGTTGGACGTCCCCGTCATCAAGGTGTCATGGTTGGTA
TGGGACAAAAAGACTCGTATGTCGGTGATGAAGCTCAATCCAAGAGAGGT
ATCCTCACCTTGAAATACCCCATCGAACACGGAATCGTCACCAACTGGGA
TGATATGGAAAAAGTGAGTTTTGTTTGTTTGCAAGAAACTTTAAACCTAG
AGTCCTTTAACCTGTTTGTTCTGTTTTGAAAGGCTGTGCTTCTTGAGGGG
AACTTCTTAACATTTGGGACAAAATTCTCTTCAAAAGTCTCAAGTGAGTA
AGGCCTGGAAAAATTTGTTACTTTGTACATGGGCGTGGTGCTATTTGTTC
TACTGAATTGCATTTTCTTGAAACAGCAAAAAAAGTTTATTAAGTGAAAC
TGAAACAAAGATTGCTTCTTTTTGCGTATTATGCTTTTCTTGTTGAAAGA
AAACAAACCTTGAGGTTGAGGGTTGATGAAAACCTTAAAACTTAGACCTT
TTTGCGTGGGTGTAACACTTTGAAAATTATTAAGCTAAATCTTTTAAGTA
ACTTGTTTGGGCGTTGGTTAAATAATTTAATTCTGATTTGTTTCATTTTT
TTAATGAGCTTTCATACCTTTACTTCAAACTGAAAACATTTAACTAGTTA
ACACTTTTGATGGAATATCTTCCTTGTATTACATATGGTTCTTGACTTAA
CTTATTCTAAACATAATAATATTGTTTCCATAGATCTGGCATCACACATT
CTATAATGAACTCCGTGTCGCACCAGAAGAGCACCCTGTCCTCCTTACCG
AAGCTCCATTGAACCCAAAAGCTAACAGAGAAAAGATGACCCAAATCATG
TTCGAGACCTTCAACTCCCCAGCTATGTACGTCGCCATCCAAGCTGTCTT
ATCATTGTACGCCTCTGGACGTACCACCGGTATTGTCTTGGATTCTGGAG
ATGGTGTCTCTCACACTGTCCCAATCTACGAAGGTTATGCTCTTCCCCAC
GCCATCATCCGTCTCGATTTGGCTGGACGTGATTTGACCGACTACTTGAT
GAAAATCTTGACCGAACGTGGATACTCCTTCACCACCACTGCTGAACGTG
AAATTGTCCGTGACATCAAAGAAAAATTGTGCTATGTTGCCTTGGACTTC
GAACAAGAAATGCAAACTGCTGCCTCAAGCTCCAGCTTGGAGAAATCCTA
TGAATTACCTGATGGACAAGTCATCACCATTGGAAATGAACGATTCCGAT
GCCCAGAAACCCTCTTCCAACCTGCCTTCATTGGTATGGAATCTGCTGGT
ATCCACGAAACCACCTACAACTCCATCATGAAATGCGATGTTGACATCCG
TAAGGATTTGTATGCCAACACTGTCTTGTCTGGAGGTACGACTATGTTCC
CAGGTATTGCTGACCGTATGCAAAAGGAAATCTCCGCCCTCGCTCCACCA
ACCATGAAAATCAAGATCATCGCTCCACCAGAAAGAAAATACTCCGTCTG
GATCGGAGGATCCATCTTGGCTTCACTCTCCACCTTCCAACAGATGTGGA
TCTCCAAACAAGAATACGACGAATCTGGTCCATCCATCGTCCACAGAAAA
TGCTTCTAAATTATTTATTTATTTTCTTCCAATTTTATTTTCGACTTATG
TCTTCTTATGGTTCGAATTATGCAATTCTTTGTAAAAATTCCGTTATGTA
CATAAATACAATTTAACATACCAAAATATTCAACTTGGGTTATTCATTTC
CCTGTGTTATTCAAACCTTCGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020846TCONS_00020846Clytia hemisphaericatranscript
TCONS_00020845TCONS_00020845Clytia hemisphaericatranscript
TCONS_00020844TCONS_00020844Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020844-proteinTCONS_00020844-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000371supercontigsc0000371:25190..28661 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
ACTBactin, cytoplasmic 1 Homo Sapiens
ACTG1actin, cytoplasmic 2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2641.34	2533.06	3012.19	2950.77	502.42	425.63	1769.66	1914.03	1850.64	2404.03	1547.59	1198.3	4257.33	4518.49	1755.04	2027.47	2978.57	3625.79	5562.17	3756.93	1836.58	1955.63	1984.2	1897.73	2106	2129.21	2868.49	3332.92	3624.12	3807.21