XLOC_010898 (gene) - C. hemisphaerica

Overview
NameXLOC_010898
Unique NameXLOC_010898
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000326:334569..341551+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010898 ID=XLOC_010898|Name=XLOC_010898|organism=Clytia hemisphaerica|type=gene|length=6983bp|location=Sequence derived from alignment at sc0000326:334569..341551+ (Clytia hemisphaerica)
NAATAAATACAAGAAGTTTAAAGTGACTGATCAGAACATACAAAATTCGT TAAGGAAGTATCATTCTATAGATATTGGACAAGCAATGCAAGAACTGGAA AAGGATAATAAATCTTCAGTCGATAGAAAATTCGAAGAATTGAATGCATC TACACCGAAAGAATCGAATAAATCGGATAAATCGAGTCTTTTCCCTGCTA CTCCTTTAATAGATGAAAAACAATTCGATCGATTAATTTCATCGACTCCA AACGATTCAAGTGTATTAGATAAATCGAGTTTATCACCTGCTACGCCTTT AATGGTTGATCGTCGCTTCGAAGAACTTACGAAAGCAATGAATCTGAGTA ACGCCTCAACGCCAACCGACCAGATATGTGAACTACATTCTCATTTATCG CCACAGTCCTTCGCACCGAGTTTCGCATCGACACCGACAACTACCGACAA TTTATACGATCGTTTATCGGATATTGATTCTCACCGACGAAGTCCGATGA GTTTCACTTCCGAAGACCGACGAGCAATATCAGAACCATTTTCGTTTTTA AATCTAGAAGAACCTCCAGCTGGACCTCCGACGCCACCAGTAAGGACGAA CACTGGGAGCCGGTTGAAACACGATCTGAAAAACAAAGACcaaaataaca attttgaaGAATTACGTAAAGTTGAGCGACAAAAATCAAGCGTGTCACAA CACTCGCTTCGCCCGGAAAGATCCGATTCGGGAAAATCAAAAACCCGAAA ATCCGATCAAGTTGAACGCGGACCTTCTTTCAAAAGATCAATTTCACCGA TGCTACAAAACTTACGGTATAAAGACATGGGTGATGACACTCCAGAAGAA ATATACCAACCATCAACATTCTTAGCACAATCCAATAAAAATTCATCATT CGGCAAATTAGACCGTGTCCGAAGTTTCTCAGCTGATCATTTAGTTTCGG ACGATGAAGTTTTTAAACCTTTTACTGATTACCTTGATGAAAAAGGACTG GATCAAGTTGATTTTAAGGTCCCATCTATATCAAGTGataatagcaagac actgttcACACGAAAAAAGAAGGTACGTACCTAGTCTAAATCTAGActac taatttaaaactttatacTAAAATGCTACTAAGATTATTTCAAACTAAAA AGAGAGATGCGCTCCAGAGAGAGAGGAAAAATTATTGTATTATAAAAAGT CAATCGCTCGCGGTTTTTTTATAGCAGACTTACTCCTTTTCGGCTTTGTG GCAGAGCTACCCTTATATAATGGTCTGGAAATCGAGACTAGTACGTTCCT GTTTCCGGGCTTAAACAATGTTCATAGATTGTTCTTTATATCCAAGCTTG CATACAACATTATTTTGACGTTTAACTTATGTCacaacgtctatataacg ttagatgaacgttgaatcAAAGTTGTGGTCCTTGATTCGATTATTCCATT CTGTATGTTAACCGTTACTGTTATCTAAGGCTGGGAATTTCTTTTCTTAA ATGTTAGCTAGAATTGAgtcttattgttcttataaaaaagctctCATATG TCTTGCCTATTCTCGAATACCGTCATTTCTCTAATTAGTTGGGAAGAAGT CCTTTAATTTATTTCCTCTAAATATCAAGTTTTTTGTGTCACCTTAGagc ctctctctaattcgaatgctCACAACTTATGTCTTTTTCAGTAGATTTGG GACATGGACAtggacggacgaaaaatgtctTTTGAGATTTGTAGAATTTT GTATGAATGTttgagttttctttttttgtgtATATAGAGATTACCAGCGC TTCTTCGTGGCGTCACGTCGTTCATCAGCTCCGTGCGCTCAAAGAAAGAA GACCCGTACGAGGTAAGCTTGTATTTCTAAAACAATTCTTACCATTCCAA AACATGAAAtaaaaaccttcaaaaatattaagaatgaTTTTATTCCCAAT CTTATTCGAAAAAAGCGCAAAGGTAGAGCATTCAGCTGCGGTATACATGA AACCAACCACCTGTTCTGTATCAAAGAAAAATATGGTACTGACGCCTCCC TTTGCTCAAAAACTAAAGAGAAGGGCTAAAAAGTAAATAGCGGAATCTAG GCACAGAAAATGATACCCTGCACTACTTTTAGGTAGACAGCTGAGGAAGA GGGTGCCTTCGGGTCGCCCACAAAAGcgttcaaaaaacttttttattcac tgattctttttcatttcagatcTACTTTAGCTCATCTTCGACAAACCTCC CACCTTTTGATATAAATAACATACCAAAACAGCAACGTAAAACTCTACTC AATAACGTTACATTACCAAGAGCGTCCCGTAAAGGTTAgaaatcgttttc tttactaAACATAAGAATTACTTGTATTAATAAGTAAAAGTCGAAGACTA GAGTCGAATTTCCTATTAAGACTTTGATTTGCACAGCCCGAGTAGTTCTT GAACAAACGGTAGAGGAAGTAACATTTACCACTagggaatttgaaaaatt tcaaaacgcgaaaaacaaagaaatttctCTAGATTCAATCTTTTATATGA AATGTAGCGCAAATTTTAAGGCCTCGTTTTTTCTTGCtcgagaaaggttg aagattcgcCTCTCTAGCCTCCGACTTGCAACTAAATGGCTTGCACCACC CAGAGCAACACGAATGATTCTAAACTTTCTTTTTGTGTCTTGTCTTGTGT GGGTCTGTTTTCGTTAGATTACTTCACGTTAGTCTTTTCGCATCGAAGAG TTAGGTACAAGCTAACTAAAGTCAGAGCTCCCGTAATGTAATGTGATGCA AAAAGACATTTTATAACTTTGGAAAAGAATTTGCCGAAAGATTTAGATAG GGCGCCTGTTTTAGGTTTTCCTGTGATGCAATGATGTGTCTACGTCTACG TTTCTTGGGAGAAAATGGGAAAGAATAAACCTTGCTATATCGTTTATAAA TAGATTTAGGAATTACCTATGTATGTTAGTTAAAATAAGGACCACTAAAC TGTAAAGCCTTCTTTGGGGATTGTACGCTTTTGTAAGCCTTCAAGAAGTC TTTCTTCTTGATAagctttattcatgatattcatgacgcaATGTTTTNTG TTTTCGTTAGATTACTTCACGTTAGTCTTTTCGCATCGAAGAGTTAGGTA CAAGCTAACTAAAGTCAGAGCTCCCGTAATGTAATGTGATGCAAAAAGAC ATTTTATAACTTTGGAAAAGAATTTGCCGAAAGATTTAGATAGGGCGCCT GTTTTAGGTTTTCCTGTGATGCAATGATGTGTCTACGTCTACGTTTCTTG GGAGAAAATGGGAAAGAATAAACCTTGCTATATCGTTTAGAAATAGATTT AGGAATTACCTAATGTATGTTAGTTAAAATAAGGACCACTAAACTGTAAA GCCTTCTTTGGAGATTATACGCTTATGTAAGCCTTCGAGAAGTATTTCTT CTTGATAagctttattcatgatattcatgacgcaatgttttctacggaaa gaccccggtttttgccagtagtggtgaattttatacaacttttatctagt ttaaatttgccactactggctaaaacgggggtttttccgtagaaaacatt acgtcatgaatatcatgaatctgTAACTTAATAACTGATTTAAATTACTC ATGATTAAGCTGTAatattaataattaaaataatgaTTAAAAGTCAAAAG CTAGAGTCGAATCTTCTAGATATTTTAGATTTGAAGAGCTCcgacctcgt ccccgtgtatcccaggctttatttatgttactgattgacgccatagaata ttatctagcgttatcagtaagcataaaaaagctgataatacgcagggaac gaggttggaaGAGCTCTActtataattcatgatattcattatgtaatctt ttctacggaaataaccaatagtggcaaattttagctaaagaaacattacg tcatgaatatcatggaTAGACATGATTTGTGCGGCGCGTGTGGTTTTCAT ATAATCACCCGATAGGAAGCAACATTTCACCAGGGATTTTTAAATATGTA AAATGCGAAACAAACAAAGTACTAGATTCAATCTGTGATTTAAAATACGA AATTAATGTTAAAGTTTCACTTTTGCTTGTTTGGGAAAGTTTGAAGACTC GCCTCTAGCCTTCGTCTTAAAACACCTTAAATTAAAACCCTTTAAAACTC TAAAcataaatataaattttaaactttaaaaggATTCGATATGGACGAGC TATTCGAAAGCAAGCCGATCGACGGAGTATACAGGACACACAGCATTGAG CGCCATCATGGTACACCCACACCGAGTCCACCTCAATCGgggtacaaaaa caaaaacaacgtCAAACATAATCCAGCTAATATCGAATTCAACCGAATGG ACCAATCATTGAGAGGGACTAGTCAATACGTTaaagaaatcgaaaaacaa CAGGCTAAAGACTATTTACCAGTACACGATGGGCGGGAGGACGCCCTTCC TTTGGCGGGCCGAATGCGGACAAATTCAAACTCGCGTAAAGAACGTGTTA ACGCTATCATATGGTaggagatgccttggagtttttacaagatacttcac tgattggtcatttaaagtgatagagatgacgcgttctttagataaagtaa caaaattattttattacatcttaacgaccaaccaaatcaaataagagctt gtaaaaactccagcttgtccctatGGTAGAGATAAAAAGCATTTTCACAT AtatgatgtttttaatgaattttaggTCTACGANGTTAACGCTATCATAT GGTAGAGATAAAAAGCATTTTCACATATAtgatttaaaaatgaaatttag gtCTACGAAAAATAACATGGCGATATCTAAATTAAAATATTAATTATAAC TAAAAGTATTTTAAATtgttaaaatatataaaaactcCTGATAGAAAGGT AGTAAGATTACTAAACTGTATAATTCTTTTAATGAAGGACCTGTTCGTCC CTCATCAATTCACCAAATGATGATGATTCCCATGACGAGTTACTTTTTTC CGTTCTTTGAGCAGTTTCAGAATAAAACCATTAACCCCCTGTGGATGACA CTgtcttttggagtttttttttacGGATGACAAAATGGAAAGAGAACTCT TTCGCTCTCAGTCCATTCATATTCTTGAAAATTTACGATTGTCACTCCGC CGCCTACTTAGAAAAACGTTTTACACGGGACCTCAGGCCTTTTAAGAAAA ATGTTAATGTGATAAAGTTTAAAGGGTGGTTCTATACCCTCATATTTTCC TAATTATTTGGTCATCCGTATCGATAAATCCgtaaaatttgatttatttt cttgcTAAATATGTATCGGAAAatccaagattttttcttaaaaactcaTG AATCTTACGGAaatcctgaagtttttcaaaagttaattGTTACGGAAATC CATGTCGTCCACAGAGGGGTAATGGACTATAACTGGAACCACCTTTCTAT TCTGAAATATATTCTAAGTCTTGATCATACAATAGTTTTAAATGCGATTT ATTGATTTCCATTTAAACAAAAGAGCGTACATTcgcccatttttctaaaa ttggaACCGCACAGATATCATATATAAAATACACTTGATAGAGCTGCTTT ATGCCacggcaggtgaagcaaaataattgtGACATCACTCTTTTGAAGCT AGCAAATAATTTTGCTTCAGTTAGGGACAGAAAAGACTATTTAGTATTTT ATATACGATATCTTTGGTTGCAACTAGTAATTGTTTTGTATCATGTTTGC AGTAGCAATTTAAGTTTTAAAACACCAGTTGTTGCTTAAAATGTCTTGAC TCTCAGGGTCAGTTATGATAACGTCTTGTTcgtcactttttttttgatgt ttcgaTCTTTGATCAGATTTTGACTCCATATTACACCCCATTCTCACAGA CCACTGgaaaaatcgaccaaaataccgtccccgggggggggggggNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNGGGGGGGGGGGTAGTTTCAGtgttcccactgaaaataatcca ATAAACCAGTCCTCACTGCAATATTTTATaccatttttcccatccccact gaaatccccagccataaaaaatatagaggaatatcaatccccatcgagtt tcagtccattatttttatcctccactggctgaaaaaatcctatcgggtct gtgagaagcgGGTGTTATATTCTATATAAATCTGCAATATGATCAAAAAA ACTCTCAAAAGGAGAGTAACATCTAATCACAAAGTCACATTCATCATCAT TCATTACCAGATTTTGCcagatttttggatgatttctgGATGATTTTCtt cacacaacgttgtttcaacgttcatatcACTTCAATTGATATTATGGATG TCATATGTACGCTGGATGAGCATTCAATGTTGCCGACATTCTCTCATTTC TTCTCGTCGGCGTACCGATTATAAACAACATTGCTGCTATTGTTCGAATC TGTATGATGAATCCTATTGGTCGATCCATTTCGAACGCTCATCCTATTGG TGGAAAGACCTTGTgaattgatttgattggtcgaaccGCCGTAAGAATTA AGATGATTGGTCGAGCCGCTGTGTTGATCTTTCGATGAAGAGGAGAAAGA GAAGGTTTGAACGGATAAAGCTCTTGCCAATGTTTTGTTACGGCCAAATA GTAAGATGAGctgaaaagaagaaacaatTCTTAAAAAGTTGTGTAATTGT TTTTcctaaaggaagaaattatggcgggaatttaatttggtaatataaat tttaaaatatgatAATACCTTACTtatataccttaagtggataaattttg gtgtGGATTTAAACCAAGAAACGATtcttggcg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00019394TCONS_00019394Clytia hemisphaericatranscript
TCONS_00019395TCONS_00019395Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00019394-proteinTCONS_00019394-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000326supercontigsc0000326:334569..341551 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.21 1.15 0.48 0.15 0.61 0.61 1.02 1.74 1.32 1.06 1.5 1.22 18.27 20.46 15.26 10.34 2.49 2.9 11.47 10.68 3.26 3.32 2.3 2.44 3.8 3.54 2.52 1.48 0.83 0.96