TCONS_00019394 (transcript) - C. hemisphaerica

Overview
NameTCONS_00019394
Unique NameTCONS_00019394
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3017

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00019394 ID=TCONS_00019394|Name=TCONS_00019394|organism=Clytia hemisphaerica|type=transcript|length=3017bp
NAATAAATACAAGAAGTTTAAAGTGACTGATCAGAACATACAAAATTCGT
TAAGGAAGTATCATTCTATAGATATTGGACAAGCAATGCAAGAACTGGAA
AAGGATAATAAATCTTCAGTCGATAGAAAATTCGAAGAATTGAATGCATC
TACACCGAAAGAATCGAATAAATCGGATAAATCGAGTCTTTTCCCTGCTA
CTCCTTTAATAGATGAAAAACAATTCGATCGATTAATTTCATCGACTCCA
AACGATTCAAGTGTATTAGATAAATCGAGTTTATCACCTGCTACGCCTTT
AATGGTTGATCGTCGCTTCGAAGAACTTACGAAAGCAATGAATCTGAGTA
ACGCCTCAACGCCAACCGACCAGATATGTGAACTACATTCTCATTTATCG
CCACAGTCCTTCGCACCGAGTTTCGCATCGACACCGACAACTACCGACAA
TTTATACGATCGTTTATCGGATATTGATTCTCACCGACGAAGTCCGATGA
GTTTCACTTCCGAAGACCGACGAGCAATATCAGAACCATTTTCGTTTTTA
AATCTAGAAGAACCTCCAGCTGGACCTCCGACGCCACCAGTAAGGACGAA
CACTGGGAGCCGGTTGAAACACGATCTGAAAAACAAAGACcaaaataaca
attttgaaGAATTACGTAAAGTTGAGCGACAAAAATCAAGCGTGTCACAA
CACTCGCTTCGCCCGGAAAGATCCGATTCGGGAAAATCAAAAACCCGAAA
ATCCGATCAAGTTGAACGCGGACCTTCTTTCAAAAGATCAATTTCACCGA
TGCTACAAAACTTACGGTATAAAGACATGGGTGATGACACTCCAGAAGAA
ATATACCAACCATCAACATTCTTAGCACAATCCAATAAAAATTCATCATT
CGGCAAATTAGACCGTGTCCGAAGTTTCTCAGCTGATCATTTAGTTTCGG
ACGATGAAGTTTTTAAACCTTTTACTGATTACCTTGATGAAAAAGGACTG
GATCAAGTTGATTTTAAGGTCCCATCTATATCAAGTGataatagcaagac
actgttcACACGAAAAAAGAAGAGATTACCAGCGCTTCTTCGTGGCGTCA
CGTCGTTCATCAGCTCCGTGCGCTCAAAGAAAGAAGACCCGTACGAGatc
TACTTTAGCTCATCTTCGACAAACCTCCCACCTTTTGATATAAATAACAT
ACCAAAACAGCAACGTAAAACTCTACTCAATAACGTTACATTACCAAGAG
CGTCCCGTAAAGgATTCGATATGGACGAGCTATTCGAAAGCAAGCCGATC
GACGGAGTATACAGGACACACAGCATTGAGCGCCATCATGGTACACCCAC
ACCGAGTCCACCTCAATCGgggtacaaaaacaaaaacaacgtCAAACATA
ATCCAGCTAATATCGAATTCAACCGAATGGACCAATCATTGAGAGGGACT
AGTCAATACGTTaaagaaatcgaaaaacaaCAGGCTAAAGACTATTTACC
AGTACACGATGGGCGGGAGGACGCCCTTCCTTTGGCGGGCCGAATGCGGA
CAAATTCAAACTCGCGTAAAGAACGTGTTAACGCTATCATATGGTaggag
atgccttggagtttttacaagatacttcactgattggtcatttaaagtga
tagagatgacgcgttctttagataaagtaacaaaattattttattacatc
ttaacgaccaaccaaatcaaataagagcttgtaaaaactccagcttgtcc
ctatGGTAGAGATAAAAAGCATTTTCACATAtatgatgtttttaatgaat
tttaggTCTACGANGTTAACGCTATCATATGGTAGAGATAAAAAGCATTT
TCACATATAtgatttaaaaatgaaatttaggtCTACGAAAAATAACATGG
CGATATCTAAATTAAAATATTAATTATAACTAAAAGTATTTTAAATtgtt
aaaatatataaaaactcCTGATAGAAAGGTAGTAAGATTACTAAACTGTA
TAATTCTTTTAATGAAGGACCTGTTCGTCCCTCATCAATTCACCAAATGA
TGATGATTCCCATGACGAGTTACTTTTTTCCGTTCTTTGAGCAGTTTCAG
AATAAAACCATTAACCCCCTGTGGATGACACTgtcttttggagttttttt
ttacGGATGACAAAATGGAAAGAGAACTCTTTCGCTCTCAGTCCATTCAT
ATTCTTGAAAATTTACGATTGTCACTCCGCCGCCTACTTAGAAAAACGTT
TTACACGGGACCTCAGGCCTTTTAAGAAAAATGTTAATGTGATAAAGTTT
AAAGGGTGGTTCTATACCCTCATATTTTCCTAATTATTTGGTCATCCGTA
TCGATAAATCCgtaaaatttgatttattttcttgcTAAATATGTATCGGA
AAatccaagattttttcttaaaaactcaTGAATCTTACGGAaatcctgaa
gtttttcaaaagttaattGTTACGGAAATCCATGTCGTCCACAGAGGGGT
AATGGACTATAACTGGAACCACCTTTCTATTCTGAAATATATTCTAAGTC
TTGATCATACAATAGTTTTAAATGCGATTTATTGATTTCCATTTAAACAA
AAGAGCGTACATTcgcccatttttctaaaattggaACCGCACAGATATCA
TATATAAAATACACTTGATAGAGCTGCTTTATGCCacggcaggtgaagca
aaataattgtGACATCACTCTTTTGAAGCTAGCAAATAATTTTGCTTCAG
TTAGGGACAGAAAAGACTATTTAGTATTTTATATACGATATCTTTGGTTG
CAACTAGTAATTGTTTTGTATCATGTTTGCAGTAGCAATTTAAGTTTTAA
AACACCAGTTGTTGCTTAAAATGTCTTGACTCTCAGGGTCAGTTATGATA
ACGTCTTGTTcgtcactttttttttgatgtttcgaTCTTTGATCAGATTT
TGACTCCATATTACACCCCATTCTCACAGACCACTGgaaaaatcgaccaa
aataccgtccccggggg
Run BLAST on NCBI

protein sequence of TCONS_00019394-protein

>TCONS_00019394-protein ID=TCONS_00019394-protein|Name=TCONS_00019394-protein|organism=Clytia hemisphaerica|type=polypeptide|length=531bp
NKYKKFKVTDQNIQNSLRKYHSIDIGQAMQELEKDNKSSVDRKFEELNAS
TPKESNKSDKSSLFPATPLIDEKQFDRLISSTPNDSSVLDKSSLSPATPL
MVDRRFEELTKAMNLSNASTPTDQICELHSHLSPQSFAPSFASTPTTTDN
LYDRLSDIDSHRRSPMSFTSEDRRAISEPFSFLNLEEPPAGPPTPPVRTN
TGSRLKHDLKNKDQNNNFEELRKVERQKSSVSQHSLRPERSDSGKSKTRK
SDQVERGPSFKRSISPMLQNLRYKDMGDDTPEEIYQPSTFLAQSNKNSSF
GKLDRVRSFSADHLVSDDEVFKPFTDYLDEKGLDQVDFKVPSISSDNSKT
LFTRKKKRLPALLRGVTSFISSVRSKKEDPYEIYFSSSSTNLPPFDINNI
PKQQRKTLLNNVTLPRASRKGFDMDELFESKPIDGVYRTHSIERHHGTPT
PSPPQSGYKNKNNVKHNPANIEFNRMDQSLRGTSQYVKEIEKQQAKDYLP
VHDGREDALPLAGRMRTNSNSRKERVNAIIW
Run BLAST on NCBI

transcript from alignment at sc0000326:334569..340555+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00019394 ID=TCONS_00019394|Name=TCONS_00019394|organism=Clytia hemisphaerica|type=transcript|length=5987bp|location=Sequence derived from alignment at sc0000326:334569..340555+ (Clytia hemisphaerica)
NAATAAATACAAGAAGTTTAAAGTGACTGATCAGAACATACAAAATTCGT TAAGGAAGTATCATTCTATAGATATTGGACAAGCAATGCAAGAACTGGAA AAGGATAATAAATCTTCAGTCGATAGAAAATTCGAAGAATTGAATGCATC TACACCGAAAGAATCGAATAAATCGGATAAATCGAGTCTTTTCCCTGCTA CTCCTTTAATAGATGAAAAACAATTCGATCGATTAATTTCATCGACTCCA AACGATTCAAGTGTATTAGATAAATCGAGTTTATCACCTGCTACGCCTTT AATGGTTGATCGTCGCTTCGAAGAACTTACGAAAGCAATGAATCTGAGTA ACGCCTCAACGCCAACCGACCAGATATGTGAACTACATTCTCATTTATCG CCACAGTCCTTCGCACCGAGTTTCGCATCGACACCGACAACTACCGACAA TTTATACGATCGTTTATCGGATATTGATTCTCACCGACGAAGTCCGATGA GTTTCACTTCCGAAGACCGACGAGCAATATCAGAACCATTTTCGTTTTTA AATCTAGAAGAACCTCCAGCTGGACCTCCGACGCCACCAGTAAGGACGAA CACTGGGAGCCGGTTGAAACACGATCTGAAAAACAAAGACcaaaataaca attttgaaGAATTACGTAAAGTTGAGCGACAAAAATCAAGCGTGTCACAA CACTCGCTTCGCCCGGAAAGATCCGATTCGGGAAAATCAAAAACCCGAAA ATCCGATCAAGTTGAACGCGGACCTTCTTTCAAAAGATCAATTTCACCGA TGCTACAAAACTTACGGTATAAAGACATGGGTGATGACACTCCAGAAGAA ATATACCAACCATCAACATTCTTAGCACAATCCAATAAAAATTCATCATT CGGCAAATTAGACCGTGTCCGAAGTTTCTCAGCTGATCATTTAGTTTCGG ACGATGAAGTTTTTAAACCTTTTACTGATTACCTTGATGAAAAAGGACTG GATCAAGTTGATTTTAAGGTCCCATCTATATCAAGTGataatagcaagac actgttcACACGAAAAAAGAAGGTACGTACCTAGTCTAAATCTAGActac taatttaaaactttatacTAAAATGCTACTAAGATTATTTCAAACTAAAA AGAGAGATGCGCTCCAGAGAGAGAGGAAAAATTATTGTATTATAAAAAGT CAATCGCTCGCGGTTTTTTTATAGCAGACTTACTCCTTTTCGGCTTTGTG GCAGAGCTACCCTTATATAATGGTCTGGAAATCGAGACTAGTACGTTCCT GTTTCCGGGCTTAAACAATGTTCATAGATTGTTCTTTATATCCAAGCTTG CATACAACATTATTTTGACGTTTAACTTATGTCacaacgtctatataacg ttagatgaacgttgaatcAAAGTTGTGGTCCTTGATTCGATTATTCCATT CTGTATGTTAACCGTTACTGTTATCTAAGGCTGGGAATTTCTTTTCTTAA ATGTTAGCTAGAATTGAgtcttattgttcttataaaaaagctctCATATG TCTTGCCTATTCTCGAATACCGTCATTTCTCTAATTAGTTGGGAAGAAGT CCTTTAATTTATTTCCTCTAAATATCAAGTTTTTTGTGTCACCTTAGagc ctctctctaattcgaatgctCACAACTTATGTCTTTTTCAGTAGATTTGG GACATGGACAtggacggacgaaaaatgtctTTTGAGATTTGTAGAATTTT GTATGAATGTttgagttttctttttttgtgtATATAGAGATTACCAGCGC TTCTTCGTGGCGTCACGTCGTTCATCAGCTCCGTGCGCTCAAAGAAAGAA GACCCGTACGAGGTAAGCTTGTATTTCTAAAACAATTCTTACCATTCCAA AACATGAAAtaaaaaccttcaaaaatattaagaatgaTTTTATTCCCAAT CTTATTCGAAAAAAGCGCAAAGGTAGAGCATTCAGCTGCGGTATACATGA AACCAACCACCTGTTCTGTATCAAAGAAAAATATGGTACTGACGCCTCCC TTTGCTCAAAAACTAAAGAGAAGGGCTAAAAAGTAAATAGCGGAATCTAG GCACAGAAAATGATACCCTGCACTACTTTTAGGTAGACAGCTGAGGAAGA GGGTGCCTTCGGGTCGCCCACAAAAGcgttcaaaaaacttttttattcac tgattctttttcatttcagatcTACTTTAGCTCATCTTCGACAAACCTCC CACCTTTTGATATAAATAACATACCAAAACAGCAACGTAAAACTCTACTC AATAACGTTACATTACCAAGAGCGTCCCGTAAAGGTTAgaaatcgttttc tttactaAACATAAGAATTACTTGTATTAATAAGTAAAAGTCGAAGACTA GAGTCGAATTTCCTATTAAGACTTTGATTTGCACAGCCCGAGTAGTTCTT GAACAAACGGTAGAGGAAGTAACATTTACCACTagggaatttgaaaaatt tcaaaacgcgaaaaacaaagaaatttctCTAGATTCAATCTTTTATATGA AATGTAGCGCAAATTTTAAGGCCTCGTTTTTTCTTGCtcgagaaaggttg aagattcgcCTCTCTAGCCTCCGACTTGCAACTAAATGGCTTGCACCACC CAGAGCAACACGAATGATTCTAAACTTTCTTTTTGTGTCTTGTCTTGTGT GGGTCTGTTTTCGTTAGATTACTTCACGTTAGTCTTTTCGCATCGAAGAG TTAGGTACAAGCTAACTAAAGTCAGAGCTCCCGTAATGTAATGTGATGCA AAAAGACATTTTATAACTTTGGAAAAGAATTTGCCGAAAGATTTAGATAG GGCGCCTGTTTTAGGTTTTCCTGTGATGCAATGATGTGTCTACGTCTACG TTTCTTGGGAGAAAATGGGAAAGAATAAACCTTGCTATATCGTTTATAAA TAGATTTAGGAATTACCTATGTATGTTAGTTAAAATAAGGACCACTAAAC TGTAAAGCCTTCTTTGGGGATTGTACGCTTTTGTAAGCCTTCAAGAAGTC TTTCTTCTTGATAagctttattcatgatattcatgacgcaATGTTTTNTG TTTTCGTTAGATTACTTCACGTTAGTCTTTTCGCATCGAAGAGTTAGGTA CAAGCTAACTAAAGTCAGAGCTCCCGTAATGTAATGTGATGCAAAAAGAC ATTTTATAACTTTGGAAAAGAATTTGCCGAAAGATTTAGATAGGGCGCCT GTTTTAGGTTTTCCTGTGATGCAATGATGTGTCTACGTCTACGTTTCTTG GGAGAAAATGGGAAAGAATAAACCTTGCTATATCGTTTAGAAATAGATTT AGGAATTACCTAATGTATGTTAGTTAAAATAAGGACCACTAAACTGTAAA GCCTTCTTTGGAGATTATACGCTTATGTAAGCCTTCGAGAAGTATTTCTT CTTGATAagctttattcatgatattcatgacgcaatgttttctacggaaa gaccccggtttttgccagtagtggtgaattttatacaacttttatctagt ttaaatttgccactactggctaaaacgggggtttttccgtagaaaacatt acgtcatgaatatcatgaatctgTAACTTAATAACTGATTTAAATTACTC ATGATTAAGCTGTAatattaataattaaaataatgaTTAAAAGTCAAAAG CTAGAGTCGAATCTTCTAGATATTTTAGATTTGAAGAGCTCcgacctcgt ccccgtgtatcccaggctttatttatgttactgattgacgccatagaata ttatctagcgttatcagtaagcataaaaaagctgataatacgcagggaac gaggttggaaGAGCTCTActtataattcatgatattcattatgtaatctt ttctacggaaataaccaatagtggcaaattttagctaaagaaacattacg tcatgaatatcatggaTAGACATGATTTGTGCGGCGCGTGTGGTTTTCAT ATAATCACCCGATAGGAAGCAACATTTCACCAGGGATTTTTAAATATGTA AAATGCGAAACAAACAAAGTACTAGATTCAATCTGTGATTTAAAATACGA AATTAATGTTAAAGTTTCACTTTTGCTTGTTTGGGAAAGTTTGAAGACTC GCCTCTAGCCTTCGTCTTAAAACACCTTAAATTAAAACCCTTTAAAACTC TAAAcataaatataaattttaaactttaaaaggATTCGATATGGACGAGC TATTCGAAAGCAAGCCGATCGACGGAGTATACAGGACACACAGCATTGAG CGCCATCATGGTACACCCACACCGAGTCCACCTCAATCGgggtacaaaaa caaaaacaacgtCAAACATAATCCAGCTAATATCGAATTCAACCGAATGG ACCAATCATTGAGAGGGACTAGTCAATACGTTaaagaaatcgaaaaacaa CAGGCTAAAGACTATTTACCAGTACACGATGGGCGGGAGGACGCCCTTCC TTTGGCGGGCCGAATGCGGACAAATTCAAACTCGCGTAAAGAACGTGTTA ACGCTATCATATGGTaggagatgccttggagtttttacaagatacttcac tgattggtcatttaaagtgatagagatgacgcgttctttagataaagtaa caaaattattttattacatcttaacgaccaaccaaatcaaataagagctt gtaaaaactccagcttgtccctatGGTAGAGATAAAAAGCATTTTCACAT AtatgatgtttttaatgaattttaggTCTACGANGTTAACGCTATCATAT GGTAGAGATAAAAAGCATTTTCACATATAtgatttaaaaatgaaatttag gtCTACGAAAAATAACATGGCGATATCTAAATTAAAATATTAATTATAAC TAAAAGTATTTTAAATtgttaaaatatataaaaactcCTGATAGAAAGGT AGTAAGATTACTAAACTGTATAATTCTTTTAATGAAGGACCTGTTCGTCC CTCATCAATTCACCAAATGATGATGATTCCCATGACGAGTTACTTTTTTC CGTTCTTTGAGCAGTTTCAGAATAAAACCATTAACCCCCTGTGGATGACA CTgtcttttggagtttttttttacGGATGACAAAATGGAAAGAGAACTCT TTCGCTCTCAGTCCATTCATATTCTTGAAAATTTACGATTGTCACTCCGC CGCCTACTTAGAAAAACGTTTTACACGGGACCTCAGGCCTTTTAAGAAAA ATGTTAATGTGATAAAGTTTAAAGGGTGGTTCTATACCCTCATATTTTCC TAATTATTTGGTCATCCGTATCGATAAATCCgtaaaatttgatttatttt cttgcTAAATATGTATCGGAAAatccaagattttttcttaaaaactcaTG AATCTTACGGAaatcctgaagtttttcaaaagttaattGTTACGGAAATC CATGTCGTCCACAGAGGGGTAATGGACTATAACTGGAACCACCTTTCTAT TCTGAAATATATTCTAAGTCTTGATCATACAATAGTTTTAAATGCGATTT ATTGATTTCCATTTAAACAAAAGAGCGTACATTcgcccatttttctaaaa ttggaACCGCACAGATATCATATATAAAATACACTTGATAGAGCTGCTTT ATGCCacggcaggtgaagcaaaataattgtGACATCACTCTTTTGAAGCT AGCAAATAATTTTGCTTCAGTTAGGGACAGAAAAGACTATTTAGTATTTT ATATACGATATCTTTGGTTGCAACTAGTAATTGTTTTGTATCATGTTTGC AGTAGCAATTTAAGTTTTAAAACACCAGTTGTTGCTTAAAATGTCTTGAC TCTCAGGGTCAGTTATGATAACGTCTTGTTcgtcactttttttttgatgt ttcgaTCTTTGATCAGATTTTGACTCCATATTACACCCCATTCTCACAGA CCACTGgaaaaatcgaccaaaataccgtccccggggg

Coding sequence (CDS) from alignment at sc0000326:334569..340555+

>TCONS_00019394 ID=TCONS_00019394|Name=TCONS_00019394|organism=Clytia hemisphaerica|type=CDS|length=6384bp|location=Sequence derived from alignment at sc0000326:334569..340555+ (Clytia hemisphaerica)
AATAAATACAAGAAGTTTAAAGTGACTGATCAGAACATACAAAATTCGTT
AAGGAAGTATCATTCTATAGATATTGGACAAGCAATGCAAGAACTGGAAA
AGGATAATAAATCTTCAGTCGATAGAAAATTCGAAGAATTGAATGCATCT
ACACCGAAAGAATCGAATAAATCGGATAAATCGAGTCTTTTCCCTGCTAC
TCCTTTAATAGATGAAAAACAATTCGATCGATTAATTTCATCGACTCCAA
ACGATTCAAGTGTATTAGATAAATCGAGTTTATCACCTGCTACGCCTTTA
ATGGTTGATCGTCGCTTCGAAGAACTTACGAAAGCAATGAATCTGAGTAA
CGCCTCAACGCCAACCGACCAGATATGTGAACTACATTCTCATTTATCGC
CACAGTCCTTCGCACCGAGTTTCGCATCGACACCGACAACTACCGACAAT
TTATACGATCGTTTATCGGATATTGATTCTCACCGACGAAGTCCGATGAG
TTTCACTTCCGAAGACCGACGAGCAATATCAGAACCATTTTCGTTTTTAA
ATCTAGAAGAACCTCCAGCTGGACCTCCGACGCCACCAGTAAGGACGAAC
ACTGGGAGCCGGTTGAAACACGATCTGAAAAACAAAGACcaaaataacaa
ttttgaaGAATTACGTAAAGTTGAGCGACAAAAATCAAGCGTGTCACAAC
ACTCGCTTCGCCCGGAAAGATCCGATTCGGGAAAATCAAAAACCCGAAAA
TCCGATCAAGTTGAACGCGGACCTTCTTTCAAAAGATCAATTTCACCGAT
GCTACAAAACTTACGGTATAAAGACATGGGTGATGACACTCCAGAAGAAA
TATACCAACCATCAACATTCTTAGCACAATCCAATAAAAATTCATCATTC
GGCAAATTAGACCGTGTCCGAAGTTTCTCAGCTGATCATTTAGTTTCGGA
CGATGAAGTTTTTAAACCTTTTACTGATTACCTTGATGAAAAAGGACTGG
ATCAAGTTGATTTTAAGGTCCCATCTATATCAAGTGataatagcaagaca
ctgttcACACGAAAAAAGAAGAGATTACCAGCGCTTCTTCGTGGCGTCAC
GTCGTTCATCAGCTCCGTGCGCTCAAAGAAAGAAGACCCGTACGAGatcT
ACTTTAGCTCATCTTCGACAAACCTCCCACCTTTTGATATAAATAACATA
CCAAAACAGCAACGTAAAACTCTACTCAATAACGTTACATTACCAAGAGC
GTCCCGTAAAGgATTCGATATGGACGAGCTATTCGAAAGCAAGCCGATCG
ACGGAGTATACAGGACACACAGCATTGAGCGCCATCATGGTACACCCACA
CCGAGTCCACCTCAATCGgggtacaaaaacaaaaacaacgtCAAACATAA
TCCAGCTAATATCGAATTCAACCGAATGGACCAATCATTGAGAGGGACTA
GTCAATACGTTaaagaaatcgaaaaacaaCAGGCTAAAGACTATTTACCA
GTACACGATGGGCGGGAGGACGCCCTTCCTTTGGCGGGCCGAATGCGGAC
AAATTCAAACTCGCGTAAAGAACGTGTTAACGCTATCATATGGTagAATA
AATACAAGAAGTTTAAAGTGACTGATCAGAACATACAAAATTCGTTAAGG
AAGTATCATTCTATAGATATTGGACAAGCAATGCAAGAACTGGAAAAGGA
TAATAAATCTTCAGTCGATAGAAAATTCGAAGAATTGAATGCATCTACAC
CGAAAGAATCGAATAAATCGGATAAATCGAGTCTTTTCCCTGCTACTCCT
TTAATAGATGAAAAACAATTCGATCGATTAATTTCATCGACTCCAAACGA
TTCAAGTGTATTAGATAAATCGAGTTTATCACCTGCTACGCCTTTAATGG
TTGATCGTCGCTTCGAAGAACTTACGAAAGCAATGAATCTGAGTAACGCC
TCAACGCCAACCGACCAGATATGTGAACTACATTCTCATTTATCGCCACA
GTCCTTCGCACCGAGTTTCGCATCGACACCGACAACTACCGACAATTTAT
ACGATCGTTTATCGGATATTGATTCTCACCGACGAAGTCCGATGAGTTTC
ACTTCCGAAGACCGACGAGCAATATCAGAACCATTTTCGTTTTTAAATCT
AGAAGAACCTCCAGCTGGACCTCCGACGCCACCAGTAAGGACGAACACTG
GGAGCCGGTTGAAACACGATCTGAAAAACAAAGACcaaaataacaatttt
gaaGAATTACGTAAAGTTGAGCGACAAAAATCAAGCGTGTCACAACACTC
GCTTCGCCCGGAAAGATCCGATTCGGGAAAATCAAAAACCCGAAAATCCG
ATCAAGTTGAACGCGGACCTTCTTTCAAAAGATCAATTTCACCGATGCTA
CAAAACTTACGGTATAAAGACATGGGTGATGACACTCCAGAAGAAATATA
CCAACCATCAACATTCTTAGCACAATCCAATAAAAATTCATCATTCGGCA
AATTAGACCGTGTCCGAAGTTTCTCAGCTGATCATTTAGTTTCGGACGAT
GAAGTTTTTAAACCTTTTACTGATTACCTTGATGAAAAAGGACTGGATCA
AGTTGATTTTAAGGTCCCATCTATATCAAGTGataatagcaagacactgt
tcACACGAAAAAAGAAGAGATTACCAGCGCTTCTTCGTGGCGTCACGTCG
TTCATCAGCTCCGTGCGCTCAAAGAAAGAAGACCCGTACGAGatcTACTT
TAGCTCATCTTCGACAAACCTCCCACCTTTTGATATAAATAACATACCAA
AACAGCAACGTAAAACTCTACTCAATAACGTTACATTACCAAGAGCGTCC
CGTAAAGgATTCGATATGGACGAGCTATTCGAAAGCAAGCCGATCGACGG
AGTATACAGGACACACAGCATTGAGCGCCATCATGGTACACCCACACCGA
GTCCACCTCAATCGgggtacaaaaacaaaaacaacgtCAAACATAATCCA
GCTAATATCGAATTCAACCGAATGGACCAATCATTGAGAGGGACTAGTCA
ATACGTTaaagaaatcgaaaaacaaCAGGCTAAAGACTATTTACCAGTAC
ACGATGGGCGGGAGGACGCCCTTCCTTTGGCGGGCCGAATGCGGACAAAT
TCAAACTCGCGTAAAGAACGTGTTAACGCTATCATATGGTagAATAAATA
CAAGAAGTTTAAAGTGACTGATCAGAACATACAAAATTCGTTAAGGAAGT
ATCATTCTATAGATATTGGACAAGCAATGCAAGAACTGGAAAAGGATAAT
AAATCTTCAGTCGATAGAAAATTCGAAGAATTGAATGCATCTACACCGAA
AGAATCGAATAAATCGGATAAATCGAGTCTTTTCCCTGCTACTCCTTTAA
TAGATGAAAAACAATTCGATCGATTAATTTCATCGACTCCAAACGATTCA
AGTGTATTAGATAAATCGAGTTTATCACCTGCTACGCCTTTAATGGTTGA
TCGTCGCTTCGAAGAACTTACGAAAGCAATGAATCTGAGTAACGCCTCAA
CGCCAACCGACCAGATATGTGAACTACATTCTCATTTATCGCCACAGTCC
TTCGCACCGAGTTTCGCATCGACACCGACAACTACCGACAATTTATACGA
TCGTTTATCGGATATTGATTCTCACCGACGAAGTCCGATGAGTTTCACTT
CCGAAGACCGACGAGCAATATCAGAACCATTTTCGTTTTTAAATCTAGAA
GAACCTCCAGCTGGACCTCCGACGCCACCAGTAAGGACGAACACTGGGAG
CCGGTTGAAACACGATCTGAAAAACAAAGACcaaaataacaattttgaaG
AATTACGTAAAGTTGAGCGACAAAAATCAAGCGTGTCACAACACTCGCTT
CGCCCGGAAAGATCCGATTCGGGAAAATCAAAAACCCGAAAATCCGATCA
AGTTGAACGCGGACCTTCTTTCAAAAGATCAATTTCACCGATGCTACAAA
ACTTACGGTATAAAGACATGGGTGATGACACTCCAGAAGAAATATACCAA
CCATCAACATTCTTAGCACAATCCAATAAAAATTCATCATTCGGCAAATT
AGACCGTGTCCGAAGTTTCTCAGCTGATCATTTAGTTTCGGACGATGAAG
TTTTTAAACCTTTTACTGATTACCTTGATGAAAAAGGACTGGATCAAGTT
GATTTTAAGGTCCCATCTATATCAAGTGataatagcaagacactgttcAC
ACGAAAAAAGAAGAGATTACCAGCGCTTCTTCGTGGCGTCACGTCGTTCA
TCAGCTCCGTGCGCTCAAAGAAAGAAGACCCGTACGAGatcTACTTTAGC
TCATCTTCGACAAACCTCCCACCTTTTGATATAAATAACATACCAAAACA
GCAACGTAAAACTCTACTCAATAACGTTACATTACCAAGAGCGTCCCGTA
AAGgATTCGATATGGACGAGCTATTCGAAAGCAAGCCGATCGACGGAGTA
TACAGGACACACAGCATTGAGCGCCATCATGGTACACCCACACCGAGTCC
ACCTCAATCGgggtacaaaaacaaaaacaacgtCAAACATAATCCAGCTA
ATATCGAATTCAACCGAATGGACCAATCATTGAGAGGGACTAGTCAATAC
GTTaaagaaatcgaaaaacaaCAGGCTAAAGACTATTTACCAGTACACGA
TGGGCGGGAGGACGCCCTTCCTTTGGCGGGCCGAATGCGGACAAATTCAA
ACTCGCGTAAAGAACGTGTTAACGCTATCATATGGTagAATAAATACAAG
AAGTTTAAAGTGACTGATCAGAACATACAAAATTCGTTAAGGAAGTATCA
TTCTATAGATATTGGACAAGCAATGCAAGAACTGGAAAAGGATAATAAAT
CTTCAGTCGATAGAAAATTCGAAGAATTGAATGCATCTACACCGAAAGAA
TCGAATAAATCGGATAAATCGAGTCTTTTCCCTGCTACTCCTTTAATAGA
TGAAAAACAATTCGATCGATTAATTTCATCGACTCCAAACGATTCAAGTG
TATTAGATAAATCGAGTTTATCACCTGCTACGCCTTTAATGGTTGATCGT
CGCTTCGAAGAACTTACGAAAGCAATGAATCTGAGTAACGCCTCAACGCC
AACCGACCAGATATGTGAACTACATTCTCATTTATCGCCACAGTCCTTCG
CACCGAGTTTCGCATCGACACCGACAACTACCGACAATTTATACGATCGT
TTATCGGATATTGATTCTCACCGACGAAGTCCGATGAGTTTCACTTCCGA
AGACCGACGAGCAATATCAGAACCATTTTCGTTTTTAAATCTAGAAGAAC
CTCCAGCTGGACCTCCGACGCCACCAGTAAGGACGAACACTGGGAGCCGG
TTGAAACACGATCTGAAAAACAAAGACcaaaataacaattttgaaGAATT
ACGTAAAGTTGAGCGACAAAAATCAAGCGTGTCACAACACTCGCTTCGCC
CGGAAAGATCCGATTCGGGAAAATCAAAAACCCGAAAATCCGATCAAGTT
GAACGCGGACCTTCTTTCAAAAGATCAATTTCACCGATGCTACAAAACTT
ACGGTATAAAGACATGGGTGATGACACTCCAGAAGAAATATACCAACCAT
CAACATTCTTAGCACAATCCAATAAAAATTCATCATTCGGCAAATTAGAC
CGTGTCCGAAGTTTCTCAGCTGATCATTTAGTTTCGGACGATGAAGTTTT
TAAACCTTTTACTGATTACCTTGATGAAAAAGGACTGGATCAAGTTGATT
TTAAGGTCCCATCTATATCAAGTGataatagcaagacactgttcACACGA
AAAAAGAAGAGATTACCAGCGCTTCTTCGTGGCGTCACGTCGTTCATCAG
CTCCGTGCGCTCAAAGAAAGAAGACCCGTACGAGatcTACTTTAGCTCAT
CTTCGACAAACCTCCCACCTTTTGATATAAATAACATACCAAAACAGCAA
CGTAAAACTCTACTCAATAACGTTACATTACCAAGAGCGTCCCGTAAAGg
ATTCGATATGGACGAGCTATTCGAAAGCAAGCCGATCGACGGAGTATACA
GGACACACAGCATTGAGCGCCATCATGGTACACCCACACCGAGTCCACCT
CAATCGgggtacaaaaacaaaaacaacgtCAAACATAATCCAGCTAATAT
CGAATTCAACCGAATGGACCAATCATTGAGAGGGACTAGTCAATACGTTa
aagaaatcgaaaaacaaCAGGCTAAAGACTATTTACCAGTACACGATGGG
CGGGAGGACGCCCTTCCTTTGGCGGGCCGAATGCGGACAAATTCAAACTC
GCGTAAAGAACGTGTTAACGCTATCATATGGTag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010898XLOC_010898Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019394-exon-sc0000326-1491911889:334569..335640TCONS_00019394-exon-sc0000326-1491911889:334569..335640Clytia hemisphaericaexon
TCONS_00019394-exon-sc0000326-1510915933:334569..335640TCONS_00019394-exon-sc0000326-1510915933:334569..335640Clytia hemisphaericaexon
TCONS_00019394-exon-sc0000326-1575043694:334569..335640TCONS_00019394-exon-sc0000326-1575043694:334569..335640Clytia hemisphaericaexon
TCONS_00019394-exon-sc0000326-1491911889:336356..336430TCONS_00019394-exon-sc0000326-1491911889:336356..336430Clytia hemisphaericaexon
TCONS_00019394-exon-sc0000326-1510915933:336356..336430TCONS_00019394-exon-sc0000326-1510915933:336356..336430Clytia hemisphaericaexon
TCONS_00019394-exon-sc0000326-1575043694:336356..336430TCONS_00019394-exon-sc0000326-1575043694:336356..336430Clytia hemisphaericaexon
TCONS_00019394-exon-sc0000326-1491911889:336788..336902TCONS_00019394-exon-sc0000326-1491911889:336788..336902Clytia hemisphaericaexon
TCONS_00019394-exon-sc0000326-1510915933:336788..336902TCONS_00019394-exon-sc0000326-1510915933:336788..336902Clytia hemisphaericaexon
TCONS_00019394-exon-sc0000326-1575043694:336788..336902TCONS_00019394-exon-sc0000326-1575043694:336788..336902Clytia hemisphaericaexon
TCONS_00019394-exon-sc0000326-1491911889:338801..340555TCONS_00019394-exon-sc0000326-1491911889:338801..340555Clytia hemisphaericaexon
TCONS_00019394-exon-sc0000326-1510915933:338801..340555TCONS_00019394-exon-sc0000326-1510915933:338801..340555Clytia hemisphaericaexon
TCONS_00019394-exon-sc0000326-1575043694:338801..340555TCONS_00019394-exon-sc0000326-1575043694:338801..340555Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00019394-proteinTCONS_00019394-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000326supercontigsc0000326:334569..340555 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0629513 0.0846405 0.0826085 0.154165 0.318775 0.231507 0.388222 0.576399 0.155535 0.254991 0.244994 0.319251 12.8991 11.8541 6.8444 4.03831 1.08668 2.90009 6.73133 5.1644 0.981014 0.941498 0.385578 0.448433 1.34338 1.16874 0.459253 0.379708 0.110172 0.0596798
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00019394 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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