XLOC_010754 (gene) - C. hemisphaerica

Overview
NameXLOC_010754
Unique NameXLOC_010754
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000320:161287..165787+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010754 ID=XLOC_010754|Name=XLOC_010754|organism=Clytia hemisphaerica|type=gene|length=4501bp|location=Sequence derived from alignment at sc0000320:161287..165787+ (Clytia hemisphaerica)
TATAAAATCAAACGTAATTAGCGTAAGGGCTTTTCTATCTTACAATggat ttcttttatttatttattcgaTGTTGAAATATATACATGGTATATacaaa gttgaaaaaaacaatCTATTTATCAGCAGATATAAAGTAAGCTAGCATTA CACTTACACAAACAGTGTTCACAAGTCTTTTATAGAAGGCATATAACTTA GTTTACTTTGAATGATCGgcaaacaaactaatttcttttGTGAGGATTTA TTCAGAAACTATTTCTAACTTAAATAGACTTGAAGAGCCCTAACGAGGCT TCAGTTGACTCGGAGTCTAACATAGCGACGACTGGCTTGTAAGAAAGCAT ACTTTTTTGATCATTATTATTGAACAGACTTCTTGGCAAATATGAGTGGA TTTTTGATCGAGAATTTACTGAAAGACGATGGAAGGAGGTTTCAGGAGAA AACGGATTACACATTGCGTGAAGGTTCAGAATCAATAGACGAACACAGAC ACAGTCCACCGTTTGACTTGACGCCGTCACCCGTACGCGAAACGCCGTGC AAATCACGACACGTTTACCAAGAAGAAGATTTCGTGCATCTTTTACATCA ACATCATCGTAACGACCATGTGTCCATACGGGGCGCCAAAATGTCCAATA TCTGTGAAAAGGACCTTTCATGCAAATGTGAGATTtgtgtgtgcatgttg tgttaTGAATGGCATTCGACCTGGAAAAGATCCAACCtttcacgatttca aaaacattcattGAGCATCAAAAATATCCACCCAAAGCATTGCTCTAGAG GTAATaatgaattgatttttttgaaggaTTGAGAGAGCGACAGAGTCAGG CACGTGATTTAGAAGAAGTGAAGTGGCTTACAGATAGCACACAACAGTAA GGTGAATAAAATTATAATTNTGCAGATATAAAGTAAGCTAGCATTACACT TACACAAACAGTGTTCACAAGTCTTTTATAGAAGGCATATAACTTAGTTT ACTTTGAATGATCGgcaaacaaactaatttcttttGTGAGGATTTATTCA GAAACTATTTCTAACTTAAATAGACTTGAAGAGCCCTAACGAGGCTTCAG TTGACTCGGAGTCTAACATAGCGACGACTGGCTTGTAAGAAAGCATACTT TTTTGATCATTATTATTGAACAGACTTCTTGGCAAATATGAGTGGATTTT TGATCGAGAATTTACTGAAAGACGATGGAAGGAGGTTTCAGGAGAAAACG GATTACACATTGCGTGAAGGTTCAGAATCAATAGACGAACACAGACACAG TCCACCGTTTGACTTGACGCCGTCACCCGTACGCGAAACGCCGTGCAAAT CACGACACGTTTACCAAGAAGAAGATTTCGTGCATCTTTTACATCAACAT CATCGTAACGACCATGTGTCCATACGGGGCGCCAAAATGTCCAATATCTG TGAAAAGGACCTTTCATGCAAATGTGAGATTtgtgtgtgcatgttgtgtt aTGAATGGCATTCGACCTGGAAAAGATCCAACCtttcacgatttcaaaaa cattcattGAGCATCAAAAATATCCACCCAAAGCATTGCTCTAGAGGTAA TaatgaattgatttttttgaaggaTTGAGAGAGCGACAGAGTCAGGCACG TGATTTAGAAGAAGTGAAGTGGCTTACAGATAGCACACAACAGTAAGGTG AATAAAAttataattcattttttttctagatTACGGCAAACTACCCTCAC TAACTTTCATCGGGTACGCACGAAAATACGGCGGTCATTCTCCACACGGG AAGTTGCCGTATCCTACTTCGACACCGGGTAGCAACAATAACGGAAACAA CCCTTCAAGTAACGGATTCCGCCGACGACACCGGACCATCTTTTCTGACG AACAATTGGAGTTGATGGAGAGAATGTTCGATCGGACACATTATCCAGAT GTGATGGTGAGAGAAGAAATCGCAAGAATGATCAACTTGACCGAAGAAAA AGTTGAGGTAAGAACCTAACACTCTCTTGCGAAAAAAATTACGTCTATCC ATGCCTGAAACGAACTCAATAGAAAATAATcttacaaattcaaaaaaagt taacaaaGTGCTAGTCTGTAGACGAAAACAGTTTCATATTATGGCTCAGc taaaatgtctttaaaaagtTAGCTGTTTGGAAGGCACTGGCTAACGAAGT CCTTATTCTTTCCATAGGAATATTTCGCTTTTGCGCAAATTTATCATATT AACGAAAAAGGATGATCTGAGTAAAGCGCAAATGCAAAAACCTCGATCGA TCTAGTCCGCTTATTAGTCTCAACATGTGCTTGTCATAAATCAAATAATT AGAAAAGTAAAAGAGATCTATCAAGCGCAAATTTGAAATAGGATCAACCC ATAAAACAGTGTCGGAATTTTGAGAGGCTTTTAATTTCATAAACAGGGGA AGCTTGAAGAATTATCCCTTCTTTTAAAAATGCTCTTATTATCACCATCT TGTTGTTTTAGCTTAATCAATATAACCCGACAAAACAAACTAACACTTCC CGCAAAACCCTTCTTCTTTTGAGGACCAAAATGGgaccaaaaccaaaaaa taattGAAGGCATTTTGTATGAaaagaattcttttcaaaagaagctCGTG CCGTAAATTatcaaaagaatcaaaaagctaaaattgaaaaggttacaatt atcaaaaagaataaaagaagaGGAAACTTTGAGGCTTAAgccttattttt cttttgagctTTCCCATTTCTAATCTAATCAAGGGTATTCTACACTCGAG AAAAAAGGGTGATTCTCATTGAGGCAAAATTCAATAGATAAAAAGATCTA AAAGGTTTAAATACTTAaaagcaacaacaacaaaaaataaatagaatgaA CCTGTATAAAAGATTGGGTCCAGCTTTTTATCCTGAAATGGGGCGGTGCA GGAAAAGAAAAGGGTTAAAACAAAACCGCACCTATGCTATAtcattttac aaaaatgaaattcaaaatacATGACGAACATCAAAGCCCTGACCAAGCCC TGACCGTTACACTCCTAATGCAAAATCatttaataacttttttcccaaaa taGCACTGCTCATGCTAAAAGGTTCATCACTGTGTGGTATAATCAAGGCC TTAACTTACGCAGATTCAATAAATAGGCTATTCTTCTTTGACTTCACAGG TTTGGTTCAAAAATCGTAGAGCAAGAtggagaaaacaaaagaaagatacG CACAATTCATCACCGAAAGGACTTCGAGGAGGGATTAGCTCTGCGTTAAA CCACGGAAAGTTGACGATGAATAGTAGCTACGTCATTGATAGTGAAGGTT CAATATCTCCTTGTTCACCCATACGAGAAATCGAAAAGGCCTTAAGCAAG ACTCCTCATTGATTGACAAGCGAAAAGAAGCTTTGAGGATGCGGAGATTT TGAGGAGGAAGAATGGTGATCGGCGACAGGTCAGGTCAGACCAATTATGA CTTTCTTCCGATTGAATAATGGGACCAATGTCTTTGCTGGATTCGCCTGG TACAAAGGACGAAAAGCGAAAACCAAAAGCCGAGAAGGCGGCTCCTAACG ATCACACTCATTTGCAAACAGTCGTGCAAAATGGTGGCCTGAGACACCCA TACGGGGAGGATgctcaaaaatcttttgaaaacaatgaaTATTCGGAAGC AAATTAATGAGAAGATTCCAGCAGTGACAACAAGAAGAATCCCAAAAGGA AACAGAcaagtcaaaatcaaatttgagtGGGGAttaatctatttttttta aatggtgtATTCTTTCAATGATAAGAATTATAATTTCTCATTattttaaa ctagacaaaaagTCTCCCTCGTCGATTAGACCCATGTTGAGTTATATTTT GGAAATTCTCTTCTCTATTATGTGTTCTTGGAGTAGGAAGCTTTTGCAAA AGTAGCTCCAAAGTTATCTTGGAAAAGAATCTCTTTCAGATTACAATAAT ATGTGATTAGTTTTGAGCTGTGTTTGCACAGTATGATTCCACTCAGTGTT TTAAAGTCCCAGCGAGATTTTACTTTCCATTAGGAAATCTTTACTAAAGA ACTTAAAGACATTTCGCTAATCCAATTTCATCGTCGGCAGCTACACAGCG AGATTTTTAAAAGGGTCTAGGAATATTGGAGtagataattatttttaaaa atttgtaaatatttttgagaaaacaaaattattgaTGGATGATAACGAGT TTAAAGAATAATATATAATTTAACTCCTCTGGTAGGAGACATATTTTAGG CTTTTCCAAGTTATGAAAGGCTgtaatgaaaattgtaaaaagttcttaaa ttgaaaagacaaaaacaaaatattaaatCCTTCGTATTCGGACAAGCAAg ctctttttttatcaaaatcttaATTCGGAAACAGGCCATGCTACGGAAAT TCAAATCTAATACAATAGCCTGTAAGGTCGTTCCAGTTTAGTACTCTCCA T
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00019164TCONS_00019164Clytia hemisphaericatranscript
TCONS_00019165TCONS_00019165Clytia hemisphaericatranscript
TCONS_00019166TCONS_00019166Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
Gsc Goosecoid proteinTCONS_00019164-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000320supercontigsc0000320:161287..165787 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.11 0.09 0.06 0.04 9.57 5.9 11.88 10.79 11.16 13.96 5.4 32.68 5.92 5.05 4.2 3.15 2.29 1.97 10.99 8.91 0.85 0.97 0.44 0.57 1.19 0.74 0.19 0.08 0.06 0.04