XLOC_010610 (gene) - C. hemisphaerica

Overview
NameXLOC_010610
Unique NameXLOC_010610
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000313:344267..353032+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010610 ID=XLOC_010610|Name=XLOC_010610|organism=Clytia hemisphaerica|type=gene|length=8766bp|location=Sequence derived from alignment at sc0000313:344267..353032+ (Clytia hemisphaerica)
AAGAAGTTCATAATGTAATATTTTACACAGGGAAGGAGAGGTAAGAAGCC TGAAAATTCTCAAGTTGTTTTTTAAAAGGTCGTAGTATGTTAAAGTGATT GATGTCGTAGTATGCTAAGAGTTAATTTTTAGGTACTGTCTCTGAATCAC AGTTGGTGCAAGTACTATGATTTTGGATGCaggacaaaacaaaacaaaat ttgtttaggGGCATTTTTCGATTGTTTAGAGACCCCTTAAAAGGTTTAAA TGGATGTGTAAATTTTATAATAATGTTATAACATTGTTATGGCTTTATGC TAATATATACACCTTAAATTTAGGCGCGATACCATTTTGACTCCAGTAAT GAAGGCATCAATTTTCACAAGATAAATTTCAACAATTGATTAGGCTATTA ATAGGCTATTTGACTTTTTAACCTTATGTTTATATGTTTACTATGTTCAC TTTTAAACAAAGTGTGCCAGACACTCAGTTGTTAGTTATACAAAAGACAG TAGATAAAATTAAATGCGTGTAAATTGATCTACTACGAGGCTATTGTATA ATGGAGTAAGATAAAATAGAGTCAGACGCAATGTTTTCACAGCTGGAGTC AAAATGATTTCACGCCAAGCAAAAGGTATACATAGTATTGTCTCaatgag aaataaaaatatatgtgACTGATTGGAATCCCCAACAATAGTTAGTCACA CTTTTGTCCTCATAAAATGTGTATCAAATTGCTTTATCATTTACATGACT AATTGCAAGCAAAGAATGTGCAGCAAAAATTGgatttaagaagaaaaaaa aacctggCTCTTTCTGATGAAATTTACattttgaaagatgaaaagaTTTG ATCCATGTAAACCTTGAAAATTAGTTTGTGGAACAAGAAAGAAGCAAGAA GTAATCTATAGGTGAAAAGACACCCACCTATAGCAATGGGCATTGCCATC AATATTAAATTGAATTTTCTGTGCTTTTAAATTAAGAAAACATAGCAGCG GAATTATAGCCAAAGTTAACGATAGAAATAAAAACATCGTTTAAACCTGG ACCAGCCGGCTGCACAAgaacaaatttttaaattatgacATTCCAAACCT ATGCATTAGTTTGCTTACTTTCATTCAGCTTATTGCAGCTCAGCTTATAT ATATAATTCACAGAATTCCCCAGGGAATTTCCCTTCTGTCCACTTCTTCT TTCAGTCTGCACCACAATTAGTTTTATGGCGTGAGATGCTAGGCAATTCG ATCTGCctagccagggtgcagtatgcagtgctgacgagtcctaataagga cgaaatgcatatgcttctctgccacccaaatctcctgaaagaagatagtt ggacagaaattctttgaatttcttcacatatgaGCATGAATCTGGTAATG TGGCCCACTTTTCGATTTATTAATTTTCCTACTTTGAGGCTTTGGTGAAA TCTCTATAGGTATATAGTCATACCAAATCTTGTTGTTTCTGGTCAATCTT GATATGGGCAAGCTTAAACAGTAATTTTTTCTGATATAACAGGTACTCAA ATTTTCCTATAGGGGGCTTTCCTTCAAAATGTGAacagaaaataaggttt ttaaaaaaatgatcaaCATCATTGTTTAATAATTCATCAACAACATGCTT TTTCCGCATGGTTTTTGTTGTTCTCACAGCCAGaggatatgaaaaatgaa aaacacagtAAGAACcggcaaaaaaagtttttttggcatataaaatcaaa atgttgcggacataactttttctgttcacaaagttatgtccgcacagatt tgacacagaaaaaaattgaaaagcttTAGCTCACTGGTTTTTACATTTTN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNGTCAacgcgaaaaattattttgaagtgaA CAGTGTCTTGTTTCCGTTCACATCTTCGAGTTATGTCCGCACACTATTTA atcctttaaatttttcaaggaGTTATTCTTACTCAGCTGAATCATTTTTC TATGTCAAGGGTTACATTTGGGgtcattttatacaaatttggCTATTTGT TGGGAGACAGTGAAACAAATCAGTTTCTCCAAAAATCAGTTATGTCCgca aaaaaaagttatgtccgcaacaaatcATGAAGTTTTCTCAACCTCCAAAC ACCAATCTTAGGTTTCTTTGACAATTATTGCATCTAAGGTCATTNTCAGT TTCTCCAAAAAtcagttatgtccgcaacaaaaagttatgtccgcaacaaa tcATGAAGTTTTCTCAACCTCCAAACACCAATCTTAGGTTTCTTTGACAA TTATTGCATCTAAGGTCATTTTAAAGTTGGTTACAACcagaaaaaagttt cataatTTTCCATAGGCAAGATTTCCAGTTTATTTACTTCTTTCATATGT ATttcatgttgcggacataactattttGTCTAAAATGTTGTTGATAAAGT GTATTTGCAAGCTGGtatgatgttttattatatggaagtaatgcttaggc tattagaaatagaaaacaaatactCTGATGTCAAGTTAAggtccaaaatg aaaattttaacagaaaaNcaatgaaaattttaacagaaaaataaattttt tgtttctttgaaaatgatggttCTGAACCTGTGAGCTTGAATAAAGAATA AATCATGTATTAATTTGCATATTAAATTCATTGTGTAGTGTTCACACAAC ATAATCTACTACACATTCACTTACAGACTAGTTAGAATTGCTCCAATAGT NTATTAATTTGCATATCAAATTCATTGTGTAGTGTTCACACAACATAATC TACTACACATTCACTTACAGACTAGTTAGAATTGCTCCAATAGTTCAAAA CAGAGTCATATATTCTGTAGAAAAttgtatgttgcggacataactattta aagtatttatcagatttttaacCCTCTTAAGCAGTTATGCTAACACCTTG ACAATACTAAAGAGTTACATTTGTAAGTACCATGCAtttatttgcttttt tcaattttttgtgtcctctaGGGTTGTTCTTCtattaaaaatattagaaa gttttaatatcattgtcgagtcttcttttgttcttttcatgaagaaaaac atgtatctgaaatcaaaccaaaccaaatcttttggttttatattgattta gtctcaaatattccttaaattttggaaacagaaaaagacactccaaaatt ttaaatagaTGATGTAAAATGTTCTATGGTTCTACCctggaagaaaaaaa gttatgtccgcaacatagcATTATTATTACCCATTTAaccctttctattg aaaaggcttttcaaggaaaaatcatatttactGATTATGAAGATGTACAA CAGTTAATgtcaagctcaaaatttaacttttaaaattagatTATGACAAA AAATGATATGTGATTGGATTATATTTTACagataaatcttcaattttcag gaaatcatagttacaaagacctttcaagacaacaaatttcaatgattaag tTTTGGTTCAAGTACAGCAAAGTATTTAAAGCCAAATAATTACTCAGTTT AATGtttattgctgattttgaagtaaatttgacaaaaagttatgtccgca accaacaaggtttcattttctaattttttattgatcaactgaaatatagc aaacttttggtttttttgaaagcttataatgagtccttcaaatctagaat gaaGTTACCTGATCATTgccagttttcttttcatgaagtcaaactttatg ggattattttttagtattttagattttcgtcTGGAAAtagtgaatttgaa aaatataacataCTGGAcggtaaaaattgtttttcaatgcggcttaatat attagccatggactgaaatctaagacaagtattagattagcatattttat ctcaaatgaagtgtaaacaacaaagagttttttgccaaatttgtctgATT ATAACTACTCTAGGTCAAATTTCTGGACCAAGCCAGTTTGATTAAGCCCT GGTatttatgttttctgaaaattgaagtcattaataaaatccaggaataa aagtgaaattcaaaacttcattttttccaaatttgttcACCTATTTGGGT GACATTACCAGATTCATGCTCATATATTTAAAGGCATCTTATAAAAATGA ACGTTTGAGCAGATGTCACTTCAGAAATTGGACATCAATCCAAAGTACAT TTCAATTCTTAAATCAGGTATTCTATTTGAGTATTTTACTCTGATTTTGT ATCCATTTTGCTTTGGATGAGCTATTTTCTGAATAGAATTATAGATTTTC CAGGATTACTTTTTCTAAGATGCTCATTTACCGAGTGTGGCAGTGCCTGA TTATAAAAAGTTGACTCATTCAGCTTCTCcatttaatttattcaaaaaag gtaaattttgagTGAATGCTAAAATAGTGATCTggagttttctttctttt tagttGGGATCTTTACAGTTGATAAAGTACTTGTTTATTCAAATTTGGAA TTGCAAAAGAAAACTAATTTGACCGAGTCAAAAATTAAAGAAGTGTTACA TGCTGCAGCAAACTATGTTGTCACACAAAGAGTCAAGCAAGCATCAGTTT TAGATGTTTACACCAAGTCTTCAAGTGCTATTGATTTTcaggttattatt tttttatggctATTAATAAACAATTAACCCAAATGATTCTGTTCCTCATT AAAGCAATGATGGCTGTCTCACTCAAGCAAAATTAGTTCCTTGCAAATTT GTTGGTCTAAAAAAGTTAGAGACAGCATGTCGGgaaccaaaaatttttgt tttatttgtgaTAGAACCTAaataattaaaggttttgtttttacttaagt gtttccatttcatatcagacacttgtttcatatcaggacagtgtctacct attgttatattgtgccatgatataagtaaaaaaatatttttattttcctc tttctgaccaatcttgcgccacatccgtgtcaattcaatatcaaaaagct agtaaatcaaaattgatgagtaagcaaacgatatcgctcctatttaaaaa caaaatctttaagcCATGAAAATGAAACTTCTATCATTTATTATTTTTGC CCTGTCGTGAAAAggaacaaaagattttttcactaTTACAATAATCCAAA ATAAcctaaaataagtaaaaaatagaagaatgtttttctgttttcatttt tagttgcATATGGGGACAGAGACAGGGTAACATTTATTGCAGATTATTAA CCTGTAGGTAGTTTTTTGAAGTGGTACCCTAacggtagcactactcaata gtaGTGAgggtagcactactcaatagtaGTGTAAATTCATTGAGAGAGCT TTATCGACTTCTCCTTAAATACCTGTAATGATTAGTGCCTTTTgatgtta atttttaacactgcaatggcttctttgcgggtaccactttaAAGAAATTC TGATCAAATACGGCAGATACAGCTTGATACAGTGTTTCTACAATGCTTTT TTTAAAATACACTCatctttataatttttattttattttcaaaggttGAT AAACTGAAAACAGGATGTGATGATATTGACTCCATCCTTTCTGGTGGATT ACTTATACCAGGTGTCACTGAAGTTTCAGGTGAAAGTTCAAGTGGGAAAA CACAATTTTGTTTGCAAACATGCATTCTGACAAGTAGAGCATACAACGAT TGTAGTAAGTGTGGGATTTCAATTCAAATGATAAGAAATAGCATTGCATC CTTGCTTTGTTTCAACTTACTTTACACATCTTTGTGATTAATTAAAAACG CAAATCCACCTTATTAAGTGGATCAATTCACATGATGATCGTATTTTGCG AGCTCCAGGATTTATAAATTCTCCAGATTGAGAGTATACTTTTTTGTTAG AAACCTGGTAGAGGATTTTGGAATAAAGGGGATTGTTTATTTAGGGGAGA TTAGTGAACCCAGTGATCCCAGCTGTGCTAATTTTATTCATTTGCATTTC AGAGTGTCTCTACATTTGTACTGAAGATGCATTTCCAAACAAACGTCTGA TACAGATGACAACATCACATTCTATGTCAAAAACTGAATCTCAAAGCATC ACTGATCGTATCTTTGTAGAGCACGTTGAAGATTTAGTAATTTTTTTTTA TCTTTACGCCATGATAAAATACGTTGTCGAAAGTGGTTTTGATATTAAAC AAAACATTCGAAAAGTATCAAAAATTCTCCTGGGTTTATCCTATAATCAA TATACTTTGAGATGTCAGCCTATTAGTATTACACAATATTGCTAATATTG TTTATTTGAGTTGAATGATAACCTTGTAAAGTTAAGAGTTGTTTGAGTAA TTATTGTTCTTAAATTCATTATTAGGAAACGTTGATTTCATTTCTGGAAA CAAGGATCATTAACCTTCTTTCCAATCATAAATTGAAGTTGATCATAATT GATTCCATCACTGCTTTGTTTCGTGTTGAATTTGAAAATTGGGAATTAGC AGCAAGAGCCAAAACATTAGCTACCGTAGGAAAGCTGTTACATAAACTCA GTCATCAATACAAGATATGCGTCATTTGTGTCAACCAGGTGAGAGAGTAT CATTTTGTTTATTATTCCTTAAATAAATGCAACTTGAAAATACCACCCAT TTTAACTCCAAGGCATCTGGAACTAATAAGTAAAGTATTATCAACTTTCA GAATGACATTTGAAAGCCTTTATTAGAGGAAATACGATATTCAAGCAATT ACTCCAATCATCAGTCTCTGACAAAGGAAAAAGGCTCCCAGGAATTCCTA CTCATTTTTCCAATTGTGCTAAAAAGACTATTGATCTCATAAAGTGAAAT GAAGACTAaagaaatgaaagtgaaaaactcttgaaagggaaaactttctc aaaacatcATTTCTTTTACACAACTTGTTGTTTTCTGTGTGCTTTCATTT TAAGCATTAATTGTTTaatttatttcaagttaatTCCCTTTCTGTTTATT TGATAGGTATCTGCTGTGTTTGAGCCAGAATCATCTCTTAGTAAAAGGTA TCTTTTTAGTCAAGAACTCTTGGAATAATCAGTAATAATGGGGTAGTATT GTTTGGAAATTAAAAACTGAAGGCATGTTGAAAATTCAAGGtttatttga agtttttgaggGTCATGCACCAAATCAGTGCTAAAACTGCCAAGTAAGAT GAAATCAAAGAATTAATTATAAGCTCAAACAAATTGATAATTCTCAACTT CAGTTGAGCTAGAATCTAAGAATGTCTATCTGTGTGTCTGTGTGTGTGTC TGTCACAAAAACTTTGGGGCAGGCTGGAGACTTCAAAAATGGTCCGATTT GGCTGAAATGTAGCACACTTGATCCTTGGGTGAATCCCTGGGGTGATTTT TATCATTTTCTGAAAATTTTCATTTTTAAGGGCGTGGTCACGAGTTTTAG TCCCAAAACGaggctaaaactttggggcaggctggaaaCGTCAAACATGG TCGGATTTGatttgttccttgggtgaatatctgggggtacatgtttcatt ttaaaaaaaattttcttgttggggcctggggactagtttttagcctaaac gcGGCTAAACCCTATTTAAGAAAtgctaaaatttttcttaagccattaag tttacaattgggcctaggaatgatttcaaagatactgaagttgagccagt gcggttagcacgttcgacNTGGGCCTaggaatgatttcaaagatactgaa gttgagccagtgcggttagcacgttcgataGTTTGTTACGCTACCACCAT GATTTCAGAGCGTCTTTAATGAAGAACTTTAAAGAACGTTTAACCGTCAT GGAAAATTAAACTATGCATACATGTTTCATTCTTCTGTGCTAAAGTAAAA ACGCTCagaatgtatgtatgtatgctACACTAATGGACCTCTGTTACTGT TATTGCTATGGTTACTCTGAACTTCTAATCGCCCAACTTCAGTTGAGcaa caatctgacaatgtctgtgtgtgtgtctgtctgtctgtcacaaaaacttt agggcagcctggagactttaaaaatgcttggatttggctgaaatctgTCA Cacttccttgggtgaatatctgggggtgtttttttcattttttgaaaatt ttgatttttggggcctggggacgagtttttcgccaaaacgagNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatatct gggggtgtttttttcattttttgaaaattttgatttttggggcctgggga cgagtttttcgccaaaacgaggctaaaactttagggcagcctggtgactt caaaaatggtcggatttggctgaaatttggcacacttgtcccttgggtaa atatctggggtctacgattgggcctatgaataatttgaagccactgaagt tgagcccagtgcgttgcgcacgttcgattATACAACACAACTGATACAAA AAAGACCATATTACTGCCGTCTTCTACGTTTGTCTTATTATGCTTTCATA TTTCCAACACATTACTCAAGAAAACTAGTATTCGTTTAGGGAAGAAAAAT TCGTGCCAGCCCTTGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00018930TCONS_00018930Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00018930-proteinTCONS_00018930-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000313supercontigsc0000313:344267..353032 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
XRCC3PREDICTED: DNA repair protein XRCC3 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
33.7 30.46 39.76 43.13 8.61 7.3 10.43 12.41 12.13 8.79 7.74 12.62 7.17 11.35 10.34 12.72 8.45 12.2 4.28 3.96 8.25 6.88 15.72 13.04 20.51 26.42 4.52 3.45 5.75 6.98