XLOC_010336 (gene) - C. hemisphaerica

Overview
NameXLOC_010336
Unique NameXLOC_010336
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000300:231800..238359+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010336 ID=XLOC_010336|Name=XLOC_010336|organism=Clytia hemisphaerica|type=gene|length=6560bp|location=Sequence derived from alignment at sc0000300:231800..238359+ (Clytia hemisphaerica)
CGATGTATTCTAGGCCATAAACCCTACTTTTATTGCTGATTCTGAAACTT GCTTAAAATTCAGCCTTTTCAGGTTCAAGTTTATTCTTCATTTATCGCGT AATCGAGTctcgtttttcttataagattgTCCTGATCATTAAGACAAATT GTCCATAGAGAAATGGATATCGTCATGCTCCTTCGTGACATAAGTCTTCG TAACATCTCGATTTCTCAATAATCCTTCTACTTGCTTGCGTTGCTAAGAA CATGAATTGAAATTCGATACGAGTTTTATTTGTTTGAGGAAactttataa atcaaaaatgtaTGTGGCTAATAACTTTATTTTGCGGGTTGACTTATCAA TGTCAAAACACACATCAGATAAAGTTTGTCATTCTGTTTATcagaggaaa atatttttctgtctGGTAGAGTTGCATAGGAGTGGTTTATCGGTGGAATG AAGCAGTAAATGGTTTTAGGATTTACACACCTTCTCCACTCTGAATTATT CTCTATTTCTCATTCTTATTCTGGAGTTCTGATATAGAACAGTGTCAGTG GATTTCTCTTCCTTTCAATTCATAGAAAAGTGTTGGTGAGGTTCGGGAAG GAATTCTCAACGATGTAGACGTTTGAGTAGAATTTACTGAATGATTTTAA AGGGGAATGACCACAGGAACTTGTTGAATTTGGAGGCTTGCTTTTATCCT TTTAAACTTGAAATTATAACGATCCTATCATTTGGCCCCATTTTGGTATT TCTATACGTCGTTGCTAAGTCATTGCTAATTCAATATTTCATCAGCAGCT TAAAAAAGATAAGGGTCCATTTGTTTCCATATAAGGCCTTATGTATTGGT AACGAAACCTTGAACGGTTTTACCTCTCCTCTCTTCGGACATTTCTTACA ATATGTTATAATGTTATGATTCATAACTTGTGACGTAATATCATATGACT TATAACTGAGTTCTattagaaaaagtttttgtGAAAGAGTTTTATTCGTA AATGATATGTGACGTCTTGGTTTGTCTTGCTATGTGCATTGAAGAAATTC TTTTAACTAAATGACGGGTCTGAATTATAGTTAATTGGCTTGTAAGTCAG ATGATCATGAGATTCCAATTAAGCATGCTTTCCAATTTCAAATGCTTCTC ATTATAGTGCGTGTGTTGCTGTTTATTATGAATGtcgtggttgaaaacga aagtatgtTTAGATGTCCACAGTGTGGTTGGATGCAAACTTATATTTATG AATTGAGTTGTTTGTGTATTGAATCTATTTACTCCTACTTGGAAAACTGT ATTCGACATTCACTTCAAAACATGGTCCTATAATGCAGTAAAAATGTAGA AAATCAACTGGATATTCTGTTGGCATAAGATTTTACACTTTTTAGACGGA CCTCAATAGTATTTAACACTGAGTTTGCAATAACTTCCTTGGCAGATGTA CATAATGCCCAAGGAACTCAAAATCAATTGGTGAGTGGTGCAAAGTCTTT TTCTGTTCTAATCTTTTTCCTCTTTCTTCTAACTACAAGGTTCAATGAAA AGTAAATAAGCACCATCACCATGGCCAATGCTGAGGATGTGACCAACTGG TTAGAAGCTATCGAATCTTTCGAACAGAATCAACATGAGGATGCCATCTT GAAATTTCAGAGTTTGACACCTACTGCTAAAGTCATGTTCAACATTGGTT GTTGCTTCTTGAGTTCAAATGATTGTACAAGGGCACTGCAagtaagtaca cgtttttttataagaacaaactatataagaacataaggcttcgatggcga aaatgttaagaaaaagttaagaaaattttaaggctttgtggactctgaaa cacccaatttcttaggaaaatggacaaaaatactcaaaaaatggcgaaaa taagaacatgttaagaacatttttaggcttaaaaactcaaaaagttaaga acatctgaaggcttcaaagattttggatgttctttttaaaaaaaactacg TGTATTTACTGTATTTGTAGTTTTGATGCTTGTTGAGTAGATTTGCTTGA CTTTTTTAGCTGATTTTATCCCTGTCTCAATATGCCAGAATTACCCCAAT TGAACACCAAGACAAAAATCATCATTTGAACATAAGGTTGTTATCCATAG TGGTTTTGCCAAGAAGCTACTGGTGATGTTTTTGCCCAGTTTCTGATTAC ATAGTAGTCAGATAGAGAAATACAACCAAATTAACTCAAAAATAACTGag agaaaattttactttagaaatTAAACCATGCATTGACAATGGACAATCAC ATGGCCATCGCATATTTCTTACAAGGAGAACTCAACTTCGAAGAGAAAAA GTAAGAAGACGttattttaaaagatatttaaaGGATTCTGTTTCCTTCAA AAAGGGAAAAtgattcagaattccagagtgTTTAGGCTACCAACATCCTT TAACGAATTCGCACTCCTTCTTACTTCTTACTTCTTCCTTATATTTCCTA TATTTACATTTTTGTAGAGGTCTTCGATTCACACTAAGGTAGTGTCAGCT GCAATTACTTGCCTCTTTACTGCCTCTTTACTGTCTCTCACTACCTTTTC gatcaaaagttttcaaatattgCAACCTTTCTTTTCTCCCTTTAGATATG CGGCTTCATATAAAAGTTATGACAACGCACACCAGGCGATGAGAGGGAAA ACGTTCATCGATTATCGACCACTGGGTTTGCAACATATCATGCACGAGTA CCAGGTACAATCTGCGTCTAAATATTATGAGAATTCTCGTTATTTTCGGG CGAGGAAGTCGCTTTTTGGGCGAATATCTCAATTTGAGAGGGGTTCATAG AATAAAACAATACCTATATCGACCCTAAACACAAAAGGATTCAATGTAAG CTGTGGGGTTTGAAGGGGCTGAAAAACTACTTACTCGGATTGAGATCAGA ATGTTTGAAATGACTCAAATCATGTCTGACAACACGTTAATCTTTTCTAC AGTGTCATATTGACTTTGTTAATACTATTCCCACTCACAGGTGATAGGTA ATATGTTGATACTGGCAAGAAAGTACGGGATTGGAGATGGGATCGTTCAT ATGAATGAGCAACTTCAAAACAATGAACATATTCAACATACTATGAATTC TATCAGGGTTTGTActttcaatttctttaatttctttcgTATTAAGACTT TTTCTCATCGCAagaagcgaccgtagtgcagtagtagagcatccggctac ggtgcgcaaggtcgtGAGTTCAATcctcagccgggtcataccaaagattt ccaataTGGTACTTGaagcctctctgcttgatgctcagcaattaagagaa ggatcaagggtgaGTTGAGCAACCAAAGGGAGAAAGAGAGGctccctccc ctaccttcgggtagatagctttCGAAATAGGAATAAtcttcgggtcgcct ccaacTGCGGTAACAGACTTAAACATCTCAAAAGAGTACAACGGCTGTGG AATGAATTTTTTGCAAGCACGAAGAAGACTTTAGTCACAGATATTTCCAG TTTCTAATATAGCGTGTATACCCAGGGATACTAGCTTGGTGGAACGACAG GCGTAACACACCCTTGTATTCCATTTGCCTAGGTGCCCACTCCCCCGGGC GTGTGTATATAACAACTTCGCATATttcaacatatttttcaaacttttga tgTTTTTCAGTCTGGTGCATCAGTCAGTATCGTCAAATTTCTACCAATCA CCTTGTTCAAACCAAACAAAGCAAGCATTCAGAATGTCAACAAAAAGAAC TATCTTGGACAAGCTAAGGTATTGTTCAACATTTAGCTTTTGTATAATTT CTTCCAAAGTTAGATGACGAGAGAAGATTAACTATAAAGAATCTGTACTC GGCTAAAGTCTCAAAAGTGTGGACATTTtggtttttttaccttttctatG CACCCGTTCATGGTATGTTAGAAAGTTTTACAACGTgggaaagataaaag attgaaaaacgaagaagaaaaatgaagttggaaaaatgaagattttttgt attgttttaaaaatcagGATGTGAAAGTTTTTAGATTATTTGAACCTTGC TGATTTCCAATCTGTGTTCAGATTTTGCGTATCTTTCTTAGATAAAAAGT TATAGTCCTTTGAAGTAGGCCTTAAGCggccaaaattgaccgaaaatagc aaaaattaccaacttcacagttaatttccttggaaatatctttccaacgg tgtacaACTTTCTAACATAGCATCAATGGTTGCTGAAAAAGGGCTCCAAA ACTAAAGTATCCACATatttttgagacagactttaactaTTTATAGAGCT TAATGACCTATTAAGTATTATTTTATATCTTTTTGAACAGGTTGTATCGA CTGAAAACACCGAAGAAATATATTCTACATTCTCTGGGAAAAAGGTTTGA TTTATTTACATCTATCCGTGATAACCCACAATGATGACCACGCTTAAAGT TTTATTCCTCTAAACTAAATCCAACAACTGTATTGGTTTGTTTTAATCTT TTAGGGGTTAGCACCTATTCAGTCAATAAATAACTGATAAGGTAAGATAA TAAGCTCATTAGTGAAGTAGAAATTGACAAATGACAAATGGATATTGACA AATGGATATTTTTCTGTAAACTTTAGGTTTTTGTTAACGATGTTTCTGTA TTTTCTCCTTTAGATGCTAGAGAAGGGACCATCAACTCCACCCATTGCAG CTCGACGCCCTACACAAGCCGCCCCTGATCGCCGCCCTACTCAAACAGCA CCCAATCGAACGCCATCACCACGCCCTAGACGCATCTCAAAGCATCCTGA TTCATTTAATTCTATAAAAGGCTCTCCACCAAATCCTTCATTTAGGCCTT CCTTTTCTCAAACACCACCTTTAACAAAGAAGGCCTTCCCGATACGACCA GCCAAATCGATGGAGAATCTGGATCAAAAACCAGCGCCAAAAACACCTCC TATGAGACCTGTTAAACCATCAGATCGTAAAACATCCAGATCTGTCGAAG CTGATCTTCCAAACAGAATCTCAATGATTGGTAGTCCTCCAAAGAAACCT CTACAACCTACTTTCTCAACGCCTGCAAAACCACCCAGACCTTCCATTCC AAAACAAGACGACATCTCATCACCGAGGTTACCAAGAAATCCACCGCCTC CTAAACCAATCAACAAAGCCCAAAGCTTAGACACCACAAATGATAATTCA AAAGCGAACATGTTAGAACGTAATTTTTCgatcaaagaaaaacagttgaT GAGAGTTCTAATGGGCGGTATGGGCGGTGGCTCGATGATGGGTGGTATGG GCAGTGGTCCGACGAGGAAAACATCTTGTGAGGATACTTACCTTGCACCA CTGgaaaaagaaacaccaaaaGCTCCCCCAGCTAAACCAAGACCGATCAG TATGCACCCTTCGTCTCTCTCTAACAACAAGCCAACAACAAATATACAAA TGTCGTTGTCAGGGAAACCAACCAAAGTGCCACCAGGGCCACCAGGGAAG CCTTCTCCACCGACGCaaacaaaaccaaaaccacCTGTACTCAATAAATT CAATACCAACAACGAAAACAATAACACCCCATCATCACCGCCAAAGCCTA CCAAGAAACCTATAAACAACAATCAACCGAAACCTTTCAATCCAAAGCTT CAAAACAACGACAATAAACCTAACTCATTCAACGCTATCCTTGATCAACT TAACCAGAATTCAACTCAACCAAAACCGTTCAACAGACCATCTACAAACA GCAACAAGTCTTCGTCATCTCCACCAAAAGTTTTCCGACAAGCAATCAAC AATAACCAACCACAATCACCAAAACCGTTCAAACTACCCAACAATAAGCC AAGCGAGACTAAACCACCAATTAGACCACCAGTACCTCAAAAACATTCTC CAGAGGCTGAAGAACTATACGCCACTATAGATGAAAATCCAACAAATTCT TACAATGATAACAACAATAATACCGCTAAAAAGGCGCCGCCTAAACCGCT TCCAGTCAGCATTGAGCAGCCAAGCGTTACTGAAGATGCAATTTATGGTA ATCTTTTCATGCCGGTGTCTCAAAACAAACGCACTGCTCCTCCAAAGAAG CCCTTACCTAAATTGACCTTGTGAAAAGTTCTTTACCATGGAAATTAAAA AGCTATGAAATcttcaaatagaccttttcataaattacgtcacgaacatc acttgcctcgttttgaaattattgccaaggtgattaactcccagcggatt tcaTTAGAACTACtttcttttcatgaaaaaatgatttaatgtctcaaggg acataatcaccatggtaattgttttaAAACGAGGCAATGATGTTCAttac gtaatttatgaaaaggtctattcgaaCGAACACATTTGCCTCCTCAGCTT GATAGTCGtataaaatctttttctaattcgaatttttctctaatttgaag aatgtttttagtctcttaaagttcgaattagagaaaatcAACAGTAATTT TAGATAGCCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00018423TCONS_00018423Clytia hemisphaericatranscript
TCONS_00018424TCONS_00018424Clytia hemisphaericatranscript
TCONS_00018425TCONS_00018425Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00018424-proteinTCONS_00018424-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000300supercontigsc0000300:231800..238359 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.53 0.5 0.39 0.25 0.33 0.41 2.61 3.23 1.55 3.49 1.98 1.1 6.21 6.12 5.86 6.21 4.63 7.14 7.06 7.57 2.85 2.78 2.12 3.78 9.71 11.94 16.33 18.87 60.02 56.11