XLOC_010310 (gene) - C. hemisphaerica

Overview
NameXLOC_010310
Unique NameXLOC_010310
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000297:103853..108968-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010310 ID=XLOC_010310|Name=XLOC_010310|organism=Clytia hemisphaerica|type=gene|length=5116bp|location=Sequence derived from alignment at sc0000297:103853..108968- (Clytia hemisphaerica)
AGACTAAACATAACAAAAAGCAAAATAATGTAGTAAGAGAGAAATATTGA CAAAAAATGGGGCCGAAGAAGAAAGGAGGTGGCAAAAAAGGCAAGAAAGG AAAATCAAGTGCAAAGAAAGATCCAGCTAATGTTTTGACTTTCAATGAAG CTGTTCTCATGCACCAGTAAGTTCAAATCTTTTCACAAAAACAAAACTTT TGGTAGAAAGATTCTATGAAAATTAGAAATGGAAAGTTGCTGCTTAAAAA AATAGCCAATTTTTATGATATTTCACCTAAATTAAGTTTCACCTTATTAC ACTTATATAACTACTCAAGAATTGGCTACCCTTGCGTTAATTACAACCGT TTAATAAAATTTGAGCCAAGGTAATTTTCAAAAACCCTGTCTTTGGCGTT AATTGATTTTTGTTTGCACTCATTTTTCCTGCGTTAAATACTTGATTAGT TATATAAGATATTAATAAACTGGCTCCTTGCCCTATACGAAGTTGCTCTA TTCTTAATCATCTGAAGACATTATTATTCACTTTGCAACACAGATTGTGA TATTTCCTTTTCAAATATAGATTGGAGCTGAAGCTTGCACAGGTCAATGA TTTGAAGGAGGACATTGATGATTTGAAGTTTCGAAATGACCGTCAACGAC AGAAGAATGACTTCTTGACACAAGAGCAAGACCGACAAGTGAAGAATGTC TTAGAACAAGCGCATAACATTGCTAAGATTGAGGACAGCAAAGAGAAGGT CCCTTACCAATTTGTGGAGAATGCTCTTCATCTGAAGTTGACCAGTATCA GAGTGGAAGAACAACTGGTCGATGGTTAGTCGCTCTAATATTTTCCTTAT CAAGGCCTTGTACAGGCTGAAGAAATGTTTCAGCCAACCTTTTCTGGCAA ACTTCAAATAAGATCCCCTTGTTTTGATTGCCAGCCATAACTTTGATTTT CCTTTGTTATTTTGGGGAAAAACCAAAAGCCCAATTAAGCAATCAATTAA AAGATACATACTCAGGAGATCTTTTTTATCATTGGCTGTCCCTTAACCCT ATTCAACCTAGGCTTAAGGGGCGGTTCATAACTAGGGGGGGCTTTTCCTG TACCACCCCTTAACTTTTGATCTAGTGGGTCTTTTTGAATGAAATTTGGC ACACAAGATTCTTGTCACATAAGGTAACTTTGGACAAAAAAATTTTTTGA TGACGTCACTCATCATGCCCAAAGTGAGCAAAAACCGCAAATTTCCTTTG TTCTGATAAATAGCTATTGTACTCTAACAAAGACTTTAGAAAAAAGTTGA CTGAGTTTAAAATGCTTATTTTATCCTAAATATTAAATAAGTTACAGATT AAACGATATATGACATATAAAAAATAAATTTGTATTGGAAAAGTGTCAAT TTTTGTGACACCTTACTGTCAGAAATGTCATCATGCTCAAGGTGTGAAAA TTTTTAGGTGTCAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCC CTAGGCCGAATAGGGTTAATTGAGTAAGTCTTTTTTTCTCGAGCACACTA TATCAAAAAGAAAATTAGTTGTATCCTGATAGAATACACGTTTTTTATAA AAACATCTAAAATTTTTGAAGCCTTTGGATGTTCTTAACTTGAGTGTGAG TTATAAGCCTAAAAAATTTCTTAACCTGTTCTTTTCACCACTTTGTGAGC TTTGGCCACTTTCCTAAGAAACCGGGTATTTTAGAGCCTACAAAGCCTTA AAATGTTCTTGACTTGTTCTTAATGTTTTGGCCATTATGTTCTTATATAG TTTGTTATTATAGAAAAGACGTGTATCGAAGTCGCTAAGTGAGGTGTTAT TTCCTGATTTGATACAAAATGCTAACCATTTTATTTTTCATTTCTTCTCA TAGAATTGAATAAAAGGATTTCTTCTTTGGAAGACGAAATTCAAACGCAC AGCAAATCTTTAGAAGAAGTCAAACATTATCAGGTAAAAAAGTCTAAGAA CAAACAAAATGTTATCAAAATTCGCTTACAACATCTTTAATGCAAGTTTT TTATTAAAAGAATACAAAAAAAGGAGAGACAAAGAATGGGAATTCCCTTA AAATATAAGTTAGCAAATTATTTGTTAGTGTTTAAGTGAAGTGCTTTCTT TTTCTGGTCAAGATTGTTTTTTCTCTGTATCTTGTACATTTTGTTGTTTT TTAATGTTGTTTTGGAATTGTAGGCAATCGAAACATGAGGTCAGGAAACT GGTCACTTTTATTCTGATATGGGTGTATTGAATCATTCAAATGTGACAAA AACAAGCCTAAGTCAAGCTTTTCTCTTTTTTTAGGAACATGGTCAGNCCA AAAACAAAGACTGAAGTCAAGCTTTCCCCTTTTTAGGAACATGGTCAGAA TGTTGATAGCACCCACATTGAGCTTTTAAACAAAGAAATGAAAGACATGG AGCGATCTTACGCCGAAATGACCGAATTCTTTGACAAGAGTTTGACCACC GCTAAACATGATATCGTGAAGAAAAATGCTGATGGCATCAACCAGCAAAA GAAGTTAGTTTCCGAGGTGAGAATTAAAAACCGTAACTTTTAAAGATTTA TTAGCTGCCTCTCATTTTGGAAAAGAATAGGAAGACAGAGATTTTCAGGA ATTTTCAGGAATTTTTGGCAGACAATTGTACCCATCTGAGATGACCTGAA CCATAATCCTTCCCTTTCCACTCATCGTTGAAATTCTGCAATTGGATCGC TAAGCGTGTGAAGAAAAACAATTGTTTTATTGAACGAATCATGGCATTTT GTGTTTCAGCTTGCCATACAGAATCTGGACAGCAGCACAGAAACGGAGTT TCTCGATAATAAATGGCTTCATAAAGAGGTACTTCCTTTCTTGGAGAAAT GTCTTTTCGATCACTTTCAATTTCCGCCGTATTATTTGAACTTGGGATTT GTTACAAAAACGTCGAGTAAAGCTCTGATTGACTGAGACATACTAAGATT GCCTTATACCTCGGACATTTTGAAAAAAATATGTTTAAGTGTGCAATTTT TAGCCAATCAGAGCTTTAATCGACGTTTTTTCGTGACTATTTTACATGAA TCTTCTATAAGGAAATTCATGTATTCCAGGGTGCTTAAGACCTCCTAATT CAGACGGTTCCTCGTTGAGAAACTCTCCTATTTACTATTCATTTATATGC GTAACAGCCAGAAACAATCGGGAACAACTTGTACCGTAAGTTGGTCTAAT GTCGACATCCCTCTTCTAATTCCGACACCTGTCTTTAGAGATAGGAATAG TTGGAAGGTTTGAAGCACTGATGGACAAAAGATTTTTTCCTCTCGGACTG CTAAGCAAAGGAATTTATTTTCCACTAGCGATTCCGATCTTCTTAGTTTC CAATCTCTAAAAATGGTGTCGGAATTAGATGAGTGATGTCGACATTAGAC CATCTCACTGTATGTTTTTGAACCGTCATCATCGTTCTATCCGTTTCTTC TCAGGTTGATCTGCATCGAAGCCACATCAAAGTTGTGGAGAAAGAAGTCG AAATTCTGGAACAACACAATATCGGCATCATGGCTGACCTCTTTGATAAA CAAATGACTGAAGTCGTTCAAACTAAGTAAGAAATGTCTGAGAACTTTTG AGTCTTTTCTTTTAAAGTCAAAAAAAATTGTGACTTGAAGCTACACCAAG TGAGGCCAACTATGGATTTTCCTCCTTTGGACTTTTAAGTTCTTTCTCCT GCCAAGAAGAAATAACCAGGGCCATTTTTTTTAAATTGTGAATCTTTGAT ATCATTGTGCTAAAGTAGGTTTAGATTCTGCATTTCATGATTCAGCGACA TTAGTGTCTAAACTGCAATAAAAAACAGTAATTGAATTGGACGAGAAAAA CATTCGGGAAAAGTCGGAAAACTAGTTAATAACTAATATTTGTTTCTTCG GCAGACGATTCTTCTTGGCTTGTAAAGAAGCACAACAAAAAGATGATCTC ATGGACGAAGATGAGCCGACAAATACGCATGCGCTTGTTTCGTACAATCA CGAAGATGACGGAGGTGAGTACGAAGAAGTCATTGCAGAGCATTCTGATG ACGTCATCGATAACAATAATGAAAAGGAAGCTTTGATGTTGATGGATGAT TATTTGACGGAATTCGATGATCTCCCAAAAGAGGTTCGTTGTTTACTTTT TTCTGTGAATCATTTAAATATATTTGTGCTCGTGAAATCTGCCAGCTTTA CCCCTCTATTGCAGTCGACTGGCTTTTTTGGGTTCTGGTCAGAAAGTTTC ATTTTTCCCTTTTATTGTGTTTGAATGTTTTTCATATTTTTTCAGGGTGA CTACAAACTTGGTCCAATGGAGATCAAATTGTTATGCGTTTACGGCCAAA AGATGAACTTGCAACCTCAAGATGCGCTACATGAAAACGAACGGACCGAC GGAGTGAAGACATTCACCAAGTTCACTGCAGAAGTAAACGAACTCACCAT GGCAACACAAAAAGTGATTTGGAATGATGATTAAACCAATGTGTATCGAA TGCTGGGAGGACTTTTATACTAGGCTTCAATGTCAATAGTTCTAAACACA AAATATCGCCGTTAGGATCCCTTTTCCTACCCGCCACTGCGAACGATAAA AACCAAAGACCATAATGAAACGAAAATTCAAAGGTCACTTATTTGTTTGT ATTTCACAGTGAAATGGTTAACTTGTACAAATGTTTTTAGTTTTTTAAGT TTAGAGCATATAATTTGTTAAGTTTTTAAATTATATTTGGATGTAATAAA TTATTTTTTTAACAATTTGTAAATTTTGACGGAAATTCAAAGAAGAATGA TGATGTATAACTCGTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00018384TCONS_00018384Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00018384-proteinTCONS_00018384-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000297supercontigsc0000297:103853..108968 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
38.24 36.61 126.74 148.38 95.72 74.92 30.33 33.45 38.13 29.92 33.55 33.63 9.59 9.51 6.56 8.82 13 14.5 16.27 18.06 11.56 9.63 20.05 19.98 54.2 45.53 15.26 13.6 13.14 13.21