TCONS_00018384 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018384
Unique NameTCONS_00018384
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1621

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018384 ID=TCONS_00018384|Name=TCONS_00018384|organism=Clytia hemisphaerica|type=transcript|length=1621bp
agACTAAACATAACAAAAAGCAAAATAATGTAGTAAGAGagaaatattga
caaaaaatgggGCCGAAGAAGAAAGGAGGTGGCAAAAAAGGCAAGAAAGG
AAAATCAAGTGCAAAGAAAGATCCAGCTAATGTTTTGACTTTCAATGAAG
CTGTTCTCATGCACCAATTGGAGCTGAAGCTTGCACAGGTCAATGATTTG
AAGGAGGACATTGATGATTTGAAGTTTCGAAATGACCGTCAACGACAGAA
GAATGACTTCTTGACACAAGAGCAAGACCGACAAGTGAAGAATGTCTTAG
AACAAGCGCATAACATTGCTAAGATTGAGGACAgcaaagagaaggtccct
tacCAATTTGTGGAGAATGCTCTTCATCTGAAGTTGACCAGTATCAGAGT
GGAAGAACAACTGGTCGATGAATTGAATAAAAGGATTTCTTCTTTGGAAG
ACGAAATTCAAACGCACAGCAAATCTTTAGAAGAAGTCAAACATTATCAG
GAACATGGTCAGAATGTTGATAGCACCCACATTGAGCTTTTAAACAAAGA
AATGAAAGACATGGAGCGATCTTACGCCGAAATGACCGAATTCTTTGACA
AGAGTTTGACCACCGCTAAACATGATATCGTGAAGAAAAATGCTGATGGC
ATCAACCAGCAAAAGAAGTTAGTTTCCGAGCTTGCCATACAGAATCTGGA
CAGCAGCACAGAAACGGAGTTTCTCGATAATAAATGGCTTCATAAAGAGG
TTGATCTGCATCGAAGCCACATCAAAGTTGTGGAGAAAGAAGTCGAAATT
CTGGAACAACACAATATCGGCATCATGGCTGACCTCTTTgataaacaaat
gactgaagTCGTTCAAACTAAACGATTCTTCTTGGCTTGTAAAGAAGCAC
AACAAAAAGATGATCTCATGGACGAAGATGAGCCGACAAATACGCATGCG
CTTGTTTCGTACAATCACGAAGATGACGGAGGTGAGTACGAAGAAGTCAT
TGCAGAGcattctgatgacgtcatcgataaCAATAATGAAAAGGAAGCTT
TGATGTTGATGGATGATTATTTGACGGAATTCGATGATCTCCCAAAAGAG
gGTGACTACAAACTTGGTCCAATGGAGATCAAATTGTTATGCGTTTACGG
CCAAAAGATGAACTTGCAACCTCAAGATGCGCTACATGAAAACGAACGGA
CCGACGGAGTGAAGACATTCACCAAGTTCACTGCAGAAGTAAACGAACTC
ACCATGGCAACACAAAAAGTGATTTGGAATGATGATTAAACCAATGTGTA
TCGAATGCTGGGAGGACTTTTATACTAGGCTTCAATGTCAATAGTTCTAA
ACACAAAATATCGCCGTTAGGATCCCTTTTCCTACCCGCCACTGCGAACG
ATAAAAACCAAAGACCATAATGAAACGAAAATTCAAAGGTCACTTATTTG
TTTGTATTTCACAGTGAAATGGTTAACTTGTACAaatgtttttagttttt
taagttTAGAGCATATAATTTGTTAAGTTTTTAAATTATATTTGGAtgta
ataaattatttttttaacaatttgtaaattttgacgGAAATTCAAAGAAG
AATGATGATGTATAACTCGTT
Run BLAST on NCBI

protein sequence of TCONS_00018384-protein

>TCONS_00018384-protein ID=TCONS_00018384-protein|Name=TCONS_00018384-protein|organism=Clytia hemisphaerica|type=polypeptide|length=410bp
MGPKKKGGGKKGKKGKSSAKKDPANVLTFNEAVLMHQLELKLAQVNDLKE
DIDDLKFRNDRQRQKNDFLTQEQDRQVKNVLEQAHNIAKIEDSKEKVPYQ
FVENALHLKLTSIRVEEQLVDELNKRISSLEDEIQTHSKSLEEVKHYQEH
GQNVDSTHIELLNKEMKDMERSYAEMTEFFDKSLTTAKHDIVKKNADGIN
QQKKLVSELAIQNLDSSTETEFLDNKWLHKEVDLHRSHIKVVEKEVEILE
QHNIGIMADLFDKQMTEVVQTKRFFLACKEAQQKDDLMDEDEPTNTHALV
SYNHEDDGGEYEEVIAEHSDDVIDNNNEKEALMLMDDYLTEFDDLPKEGD
YKLGPMEIKLLCVYGQKMNLQPQDALHENERTDGVKTFTKFTAEVNELTM
ATQKVIWNDD
Run BLAST on NCBI

transcript from alignment at sc0000297:103853..108968-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018384 ID=TCONS_00018384|Name=TCONS_00018384|organism=Clytia hemisphaerica|type=transcript|length=5116bp|location=Sequence derived from alignment at sc0000297:103853..108968- (Clytia hemisphaerica)
AGACTAAACATAACAAAAAGCAAAATAATGTAGTAAGAGAGAAATATTGA
CAAAAAATGGGGCCGAAGAAGAAAGGAGGTGGCAAAAAAGGCAAGAAAGG
AAAATCAAGTGCAAAGAAAGATCCAGCTAATGTTTTGACTTTCAATGAAG
CTGTTCTCATGCACCAGTAAGTTCAAATCTTTTCACAAAAACAAAACTTT
TGGTAGAAAGATTCTATGAAAATTAGAAATGGAAAGTTGCTGCTTAAAAA
AATAGCCAATTTTTATGATATTTCACCTAAATTAAGTTTCACCTTATTAC
ACTTATATAACTACTCAAGAATTGGCTACCCTTGCGTTAATTACAACCGT
TTAATAAAATTTGAGCCAAGGTAATTTTCAAAAACCCTGTCTTTGGCGTT
AATTGATTTTTGTTTGCACTCATTTTTCCTGCGTTAAATACTTGATTAGT
TATATAAGATATTAATAAACTGGCTCCTTGCCCTATACGAAGTTGCTCTA
TTCTTAATCATCTGAAGACATTATTATTCACTTTGCAACACAGATTGTGA
TATTTCCTTTTCAAATATAGATTGGAGCTGAAGCTTGCACAGGTCAATGA
TTTGAAGGAGGACATTGATGATTTGAAGTTTCGAAATGACCGTCAACGAC
AGAAGAATGACTTCTTGACACAAGAGCAAGACCGACAAGTGAAGAATGTC
TTAGAACAAGCGCATAACATTGCTAAGATTGAGGACAGCAAAGAGAAGGT
CCCTTACCAATTTGTGGAGAATGCTCTTCATCTGAAGTTGACCAGTATCA
GAGTGGAAGAACAACTGGTCGATGGTTAGTCGCTCTAATATTTTCCTTAT
CAAGGCCTTGTACAGGCTGAAGAAATGTTTCAGCCAACCTTTTCTGGCAA
ACTTCAAATAAGATCCCCTTGTTTTGATTGCCAGCCATAACTTTGATTTT
CCTTTGTTATTTTGGGGAAAAACCAAAAGCCCAATTAAGCAATCAATTAA
AAGATACATACTCAGGAGATCTTTTTTATCATTGGCTGTCCCTTAACCCT
ATTCAACCTAGGCTTAAGGGGCGGTTCATAACTAGGGGGGGCTTTTCCTG
TACCACCCCTTAACTTTTGATCTAGTGGGTCTTTTTGAATGAAATTTGGC
ACACAAGATTCTTGTCACATAAGGTAACTTTGGACAAAAAAATTTTTTGA
TGACGTCACTCATCATGCCCAAAGTGAGCAAAAACCGCAAATTTCCTTTG
TTCTGATAAATAGCTATTGTACTCTAACAAAGACTTTAGAAAAAAGTTGA
CTGAGTTTAAAATGCTTATTTTATCCTAAATATTAAATAAGTTACAGATT
AAACGATATATGACATATAAAAAATAAATTTGTATTGGAAAAGTGTCAAT
TTTTGTGACACCTTACTGTCAGAAATGTCATCATGCTCAAGGTGTGAAAA
TTTTTAGGTGTCAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCC
CTAGGCCGAATAGGGTTAATTGAGTAAGTCTTTTTTTCTCGAGCACACTA
TATCAAAAAGAAAATTAGTTGTATCCTGATAGAATACACGTTTTTTATAA
AAACATCTAAAATTTTTGAAGCCTTTGGATGTTCTTAACTTGAGTGTGAG
TTATAAGCCTAAAAAATTTCTTAACCTGTTCTTTTCACCACTTTGTGAGC
TTTGGCCACTTTCCTAAGAAACCGGGTATTTTAGAGCCTACAAAGCCTTA
AAATGTTCTTGACTTGTTCTTAATGTTTTGGCCATTATGTTCTTATATAG
TTTGTTATTATAGAAAAGACGTGTATCGAAGTCGCTAAGTGAGGTGTTAT
TTCCTGATTTGATACAAAATGCTAACCATTTTATTTTTCATTTCTTCTCA
TAGAATTGAATAAAAGGATTTCTTCTTTGGAAGACGAAATTCAAACGCAC
AGCAAATCTTTAGAAGAAGTCAAACATTATCAGGTAAAAAAGTCTAAGAA
CAAACAAAATGTTATCAAAATTCGCTTACAACATCTTTAATGCAAGTTTT
TTATTAAAAGAATACAAAAAAAGGAGAGACAAAGAATGGGAATTCCCTTA
AAATATAAGTTAGCAAATTATTTGTTAGTGTTTAAGTGAAGTGCTTTCTT
TTTCTGGTCAAGATTGTTTTTTCTCTGTATCTTGTACATTTTGTTGTTTT
TTAATGTTGTTTTGGAATTGTAGGCAATCGAAACATGAGGTCAGGAAACT
GGTCACTTTTATTCTGATATGGGTGTATTGAATCATTCAAATGTGACAAA
AACAAGCCTAAGTCAAGCTTTTCTCTTTTTTTAGGAACATGGTCAGNCCA
AAAACAAAGACTGAAGTCAAGCTTTCCCCTTTTTAGGAACATGGTCAGAA
TGTTGATAGCACCCACATTGAGCTTTTAAACAAAGAAATGAAAGACATGG
AGCGATCTTACGCCGAAATGACCGAATTCTTTGACAAGAGTTTGACCACC
GCTAAACATGATATCGTGAAGAAAAATGCTGATGGCATCAACCAGCAAAA
GAAGTTAGTTTCCGAGGTGAGAATTAAAAACCGTAACTTTTAAAGATTTA
TTAGCTGCCTCTCATTTTGGAAAAGAATAGGAAGACAGAGATTTTCAGGA
ATTTTCAGGAATTTTTGGCAGACAATTGTACCCATCTGAGATGACCTGAA
CCATAATCCTTCCCTTTCCACTCATCGTTGAAATTCTGCAATTGGATCGC
TAAGCGTGTGAAGAAAAACAATTGTTTTATTGAACGAATCATGGCATTTT
GTGTTTCAGCTTGCCATACAGAATCTGGACAGCAGCACAGAAACGGAGTT
TCTCGATAATAAATGGCTTCATAAAGAGGTACTTCCTTTCTTGGAGAAAT
GTCTTTTCGATCACTTTCAATTTCCGCCGTATTATTTGAACTTGGGATTT
GTTACAAAAACGTCGAGTAAAGCTCTGATTGACTGAGACATACTAAGATT
GCCTTATACCTCGGACATTTTGAAAAAAATATGTTTAAGTGTGCAATTTT
TAGCCAATCAGAGCTTTAATCGACGTTTTTTCGTGACTATTTTACATGAA
TCTTCTATAAGGAAATTCATGTATTCCAGGGTGCTTAAGACCTCCTAATT
CAGACGGTTCCTCGTTGAGAAACTCTCCTATTTACTATTCATTTATATGC
GTAACAGCCAGAAACAATCGGGAACAACTTGTACCGTAAGTTGGTCTAAT
GTCGACATCCCTCTTCTAATTCCGACACCTGTCTTTAGAGATAGGAATAG
TTGGAAGGTTTGAAGCACTGATGGACAAAAGATTTTTTCCTCTCGGACTG
CTAAGCAAAGGAATTTATTTTCCACTAGCGATTCCGATCTTCTTAGTTTC
CAATCTCTAAAAATGGTGTCGGAATTAGATGAGTGATGTCGACATTAGAC
CATCTCACTGTATGTTTTTGAACCGTCATCATCGTTCTATCCGTTTCTTC
TCAGGTTGATCTGCATCGAAGCCACATCAAAGTTGTGGAGAAAGAAGTCG
AAATTCTGGAACAACACAATATCGGCATCATGGCTGACCTCTTTGATAAA
CAAATGACTGAAGTCGTTCAAACTAAGTAAGAAATGTCTGAGAACTTTTG
AGTCTTTTCTTTTAAAGTCAAAAAAAATTGTGACTTGAAGCTACACCAAG
TGAGGCCAACTATGGATTTTCCTCCTTTGGACTTTTAAGTTCTTTCTCCT
GCCAAGAAGAAATAACCAGGGCCATTTTTTTTAAATTGTGAATCTTTGAT
ATCATTGTGCTAAAGTAGGTTTAGATTCTGCATTTCATGATTCAGCGACA
TTAGTGTCTAAACTGCAATAAAAAACAGTAATTGAATTGGACGAGAAAAA
CATTCGGGAAAAGTCGGAAAACTAGTTAATAACTAATATTTGTTTCTTCG
GCAGACGATTCTTCTTGGCTTGTAAAGAAGCACAACAAAAAGATGATCTC
ATGGACGAAGATGAGCCGACAAATACGCATGCGCTTGTTTCGTACAATCA
CGAAGATGACGGAGGTGAGTACGAAGAAGTCATTGCAGAGCATTCTGATG
ACGTCATCGATAACAATAATGAAAAGGAAGCTTTGATGTTGATGGATGAT
TATTTGACGGAATTCGATGATCTCCCAAAAGAGGTTCGTTGTTTACTTTT
TTCTGTGAATCATTTAAATATATTTGTGCTCGTGAAATCTGCCAGCTTTA
CCCCTCTATTGCAGTCGACTGGCTTTTTTGGGTTCTGGTCAGAAAGTTTC
ATTTTTCCCTTTTATTGTGTTTGAATGTTTTTCATATTTTTTCAGGGTGA
CTACAAACTTGGTCCAATGGAGATCAAATTGTTATGCGTTTACGGCCAAA
AGATGAACTTGCAACCTCAAGATGCGCTACATGAAAACGAACGGACCGAC
GGAGTGAAGACATTCACCAAGTTCACTGCAGAAGTAAACGAACTCACCAT
GGCAACACAAAAAGTGATTTGGAATGATGATTAAACCAATGTGTATCGAA
TGCTGGGAGGACTTTTATACTAGGCTTCAATGTCAATAGTTCTAAACACA
AAATATCGCCGTTAGGATCCCTTTTCCTACCCGCCACTGCGAACGATAAA
AACCAAAGACCATAATGAAACGAAAATTCAAAGGTCACTTATTTGTTTGT
ATTTCACAGTGAAATGGTTAACTTGTACAAATGTTTTTAGTTTTTTAAGT
TTAGAGCATATAATTTGTTAAGTTTTTAAATTATATTTGGATGTAATAAA
TTATTTTTTTAACAATTTGTAAATTTTGACGGAAATTCAAAGAAGAATGA
TGATGTATAACTCGTT

Coding sequence (CDS) from alignment at sc0000297:103853..108968-

>TCONS_00018384 ID=TCONS_00018384|Name=TCONS_00018384|organism=Clytia hemisphaerica|type=CDS|length=9864bp|location=Sequence derived from alignment at sc0000297:103853..108968- (Clytia hemisphaerica)
GGTGACTACAAACTTGGTCCAATGGAGATCAAATTGTTATGCGTTTACGG
CCAAAAGATGAACTTGCAACCTCAAGATGCGCTACATGAAAACGAACGGA
CCGACGGAGTGAAGACATTCACCAAGTTCACTGCAGAAGTAAACGAACTC
ACCATGGCAACACAAAAAGTGATTTGGAATGATGATTAAACGATTCTTCT
TGGCTTGTAAAGAAGCACAACAAAAAGATGATCTCATGGACGAAGATGAG
CCGACAAATACGCATGCGCTTGTTTCGTACAATCACGAAGATGACGGAGG
TGAGTACGAAGAAGTCATTGCAGAGCATTCTGATGACGTCATCGATAACA
ATAATGAAAAGGAAGCTTTGATGTTGATGGATGATTATTTGACGGAATTC
GATGATCTCCCAAAAGAGGTTGATCTGCATCGAAGCCACATCAAAGTTGT
GGAGAAAGAAGTCGAAATTCTGGAACAACACAATATCGGCATCATGGCTG
ACCTCTTTGATAAACAAATGACTGAAGTCGTTCAAACTAACTTGCCATAC
AGAATCTGGACAGCAGCACAGAAACGGAGTTTCTCGATAATAAATGGCTT
CATAAAGAGGAACATGGTCAGAATGTTGATAGCACCCACATTGAGCTTTT
AAACAAAGAAATGAAAGACATGGAGCGATCTTACGCCGAAATGACCGAAT
TCTTTGACAAGAGTTTGACCACCGCTAAACATGATATCGTGAAGAAAAAT
GCTGATGGCATCAACCAGCAAAAGAAGTTAGTTTCCGAGAATTGAATAAA
AGGATTTCTTCTTTGGAAGACGAAATTCAAACGCACAGCAAATCTTTAGA
AGAAGTCAAACATTATCAGATTGGAGCTGAAGCTTGCACAGGTCAATGAT
TTGAAGGAGGACATTGATGATTTGAAGTTTCGAAATGACCGTCAACGACA
GAAGAATGACTTCTTGACACAAGAGCAAGACCGACAAGTGAAGAATGTCT
TAGAACAAGCGCATAACATTGCTAAGATTGAGGACAGCAAAGAGAAGGTC
CCTTACCAATTTGTGGAGAATGCTCTTCATCTGAAGTTGACCAGTATCAG
AGTGGAAGAACAACTGGTCGATGATGGGGCCGAAGAAGAAAGGAGGTGGC
AAAAAAGGCAAGAAAGGAAAATCAAGTGCAAAGAAAGATCCAGCTAATGT
TTTGACTTTCAATGAAGCTGTTCTCATGCACCAGGTGACTACAAACTTGG
TCCAATGGAGATCAAATTGTTATGCGTTTACGGCCAAAAGATGAACTTGC
AACCTCAAGATGCGCTACATGAAAACGAACGGACCGACGGAGTGAAGACA
TTCACCAAGTTCACTGCAGAAGTAAACGAACTCACCATGGCAACACAAAA
AGTGATTTGGAATGATGATTAAACGATTCTTCTTGGCTTGTAAAGAAGCA
CAACAAAAAGATGATCTCATGGACGAAGATGAGCCGACAAATACGCATGC
GCTTGTTTCGTACAATCACGAAGATGACGGAGGTGAGTACGAAGAAGTCA
TTGCAGAGCATTCTGATGACGTCATCGATAACAATAATGAAAAGGAAGCT
TTGATGTTGATGGATGATTATTTGACGGAATTCGATGATCTCCCAAAAGA
GGTTGATCTGCATCGAAGCCACATCAAAGTTGTGGAGAAAGAAGTCGAAA
TTCTGGAACAACACAATATCGGCATCATGGCTGACCTCTTTGATAAACAA
ATGACTGAAGTCGTTCAAACTAACTTGCCATACAGAATCTGGACAGCAGC
ACAGAAACGGAGTTTCTCGATAATAAATGGCTTCATAAAGAGGAACATGG
TCAGAATGTTGATAGCACCCACATTGAGCTTTTAAACAAAGAAATGAAAG
ACATGGAGCGATCTTACGCCGAAATGACCGAATTCTTTGACAAGAGTTTG
ACCACCGCTAAACATGATATCGTGAAGAAAAATGCTGATGGCATCAACCA
GCAAAAGAAGTTAGTTTCCGAGAATTGAATAAAAGGATTTCTTCTTTGGA
AGACGAAATTCAAACGCACAGCAAATCTTTAGAAGAAGTCAAACATTATC
AGATTGGAGCTGAAGCTTGCACAGGTCAATGATTTGAAGGAGGACATTGA
TGATTTGAAGTTTCGAAATGACCGTCAACGACAGAAGAATGACTTCTTGA
CACAAGAGCAAGACCGACAAGTGAAGAATGTCTTAGAACAAGCGCATAAC
ATTGCTAAGATTGAGGACAGCAAAGAGAAGGTCCCTTACCAATTTGTGGA
GAATGCTCTTCATCTGAAGTTGACCAGTATCAGAGTGGAAGAACAACTGG
TCGATGATGGGGCCGAAGAAGAAAGGAGGTGGCAAAAAAGGCAAGAAAGG
AAAATCAAGTGCAAAGAAAGATCCAGCTAATGTTTTGACTTTCAATGAAG
CTGTTCTCATGCACCAGGTGACTACAAACTTGGTCCAATGGAGATCAAAT
TGTTATGCGTTTACGGCCAAAAGATGAACTTGCAACCTCAAGATGCGCTA
CATGAAAACGAACGGACCGACGGAGTGAAGACATTCACCAAGTTCACTGC
AGAAGTAAACGAACTCACCATGGCAACACAAAAAGTGATTTGGAATGATG
ATTAAACGATTCTTCTTGGCTTGTAAAGAAGCACAACAAAAAGATGATCT
CATGGACGAAGATGAGCCGACAAATACGCATGCGCTTGTTTCGTACAATC
ACGAAGATGACGGAGGTGAGTACGAAGAAGTCATTGCAGAGCATTCTGAT
GACGTCATCGATAACAATAATGAAAAGGAAGCTTTGATGTTGATGGATGA
TTATTTGACGGAATTCGATGATCTCCCAAAAGAGGTTGATCTGCATCGAA
GCCACATCAAAGTTGTGGAGAAAGAAGTCGAAATTCTGGAACAACACAAT
ATCGGCATCATGGCTGACCTCTTTGATAAACAAATGACTGAAGTCGTTCA
AACTAACTTGCCATACAGAATCTGGACAGCAGCACAGAAACGGAGTTTCT
CGATAATAAATGGCTTCATAAAGAGGAACATGGTCAGAATGTTGATAGCA
CCCACATTGAGCTTTTAAACAAAGAAATGAAAGACATGGAGCGATCTTAC
GCCGAAATGACCGAATTCTTTGACAAGAGTTTGACCACCGCTAAACATGA
TATCGTGAAGAAAAATGCTGATGGCATCAACCAGCAAAAGAAGTTAGTTT
CCGAGAATTGAATAAAAGGATTTCTTCTTTGGAAGACGAAATTCAAACGC
ACAGCAAATCTTTAGAAGAAGTCAAACATTATCAGATTGGAGCTGAAGCT
TGCACAGGTCAATGATTTGAAGGAGGACATTGATGATTTGAAGTTTCGAA
ATGACCGTCAACGACAGAAGAATGACTTCTTGACACAAGAGCAAGACCGA
CAAGTGAAGAATGTCTTAGAACAAGCGCATAACATTGCTAAGATTGAGGA
CAGCAAAGAGAAGGTCCCTTACCAATTTGTGGAGAATGCTCTTCATCTGA
AGTTGACCAGTATCAGAGTGGAAGAACAACTGGTCGATGATGGGGCCGAA
GAAGAAAGGAGGTGGCAAAAAAGGCAAGAAAGGAAAATCAAGTGCAAAGA
AAGATCCAGCTAATGTTTTGACTTTCAATGAAGCTGTTCTCATGCACCAG
GTGACTACAAACTTGGTCCAATGGAGATCAAATTGTTATGCGTTTACGGC
CAAAAGATGAACTTGCAACCTCAAGATGCGCTACATGAAAACGAACGGAC
CGACGGAGTGAAGACATTCACCAAGTTCACTGCAGAAGTAAACGAACTCA
CCATGGCAACACAAAAAGTGATTTGGAATGATGATTAAACGATTCTTCTT
GGCTTGTAAAGAAGCACAACAAAAAGATGATCTCATGGACGAAGATGAGC
CGACAAATACGCATGCGCTTGTTTCGTACAATCACGAAGATGACGGAGGT
GAGTACGAAGAAGTCATTGCAGAGCATTCTGATGACGTCATCGATAACAA
TAATGAAAAGGAAGCTTTGATGTTGATGGATGATTATTTGACGGAATTCG
ATGATCTCCCAAAAGAGGTTGATCTGCATCGAAGCCACATCAAAGTTGTG
GAGAAAGAAGTCGAAATTCTGGAACAACACAATATCGGCATCATGGCTGA
CCTCTTTGATAAACAAATGACTGAAGTCGTTCAAACTAACTTGCCATACA
GAATCTGGACAGCAGCACAGAAACGGAGTTTCTCGATAATAAATGGCTTC
ATAAAGAGGAACATGGTCAGAATGTTGATAGCACCCACATTGAGCTTTTA
AACAAAGAAATGAAAGACATGGAGCGATCTTACGCCGAAATGACCGAATT
CTTTGACAAGAGTTTGACCACCGCTAAACATGATATCGTGAAGAAAAATG
CTGATGGCATCAACCAGCAAAAGAAGTTAGTTTCCGAGAATTGAATAAAA
GGATTTCTTCTTTGGAAGACGAAATTCAAACGCACAGCAAATCTTTAGAA
GAAGTCAAACATTATCAGATTGGAGCTGAAGCTTGCACAGGTCAATGATT
TGAAGGAGGACATTGATGATTTGAAGTTTCGAAATGACCGTCAACGACAG
AAGAATGACTTCTTGACACAAGAGCAAGACCGACAAGTGAAGAATGTCTT
AGAACAAGCGCATAACATTGCTAAGATTGAGGACAGCAAAGAGAAGGTCC
CTTACCAATTTGTGGAGAATGCTCTTCATCTGAAGTTGACCAGTATCAGA
GTGGAAGAACAACTGGTCGATGATGGGGCCGAAGAAGAAAGGAGGTGGCA
AAAAAGGCAAGAAAGGAAAATCAAGTGCAAAGAAAGATCCAGCTAATGTT
TTGACTTTCAATGAAGCTGTTCTCATGCACCAGGTGACTACAAACTTGGT
CCAATGGAGATCAAATTGTTATGCGTTTACGGCCAAAAGATGAACTTGCA
ACCTCAAGATGCGCTACATGAAAACGAACGGACCGACGGAGTGAAGACAT
TCACCAAGTTCACTGCAGAAGTAAACGAACTCACCATGGCAACACAAAAA
GTGATTTGGAATGATGATTAAACGATTCTTCTTGGCTTGTAAAGAAGCAC
AACAAAAAGATGATCTCATGGACGAAGATGAGCCGACAAATACGCATGCG
CTTGTTTCGTACAATCACGAAGATGACGGAGGTGAGTACGAAGAAGTCAT
TGCAGAGCATTCTGATGACGTCATCGATAACAATAATGAAAAGGAAGCTT
TGATGTTGATGGATGATTATTTGACGGAATTCGATGATCTCCCAAAAGAG
GTTGATCTGCATCGAAGCCACATCAAAGTTGTGGAGAAAGAAGTCGAAAT
TCTGGAACAACACAATATCGGCATCATGGCTGACCTCTTTGATAAACAAA
TGACTGAAGTCGTTCAAACTAACTTGCCATACAGAATCTGGACAGCAGCA
CAGAAACGGAGTTTCTCGATAATAAATGGCTTCATAAAGAGGAACATGGT
CAGAATGTTGATAGCACCCACATTGAGCTTTTAAACAAAGAAATGAAAGA
CATGGAGCGATCTTACGCCGAAATGACCGAATTCTTTGACAAGAGTTTGA
CCACCGCTAAACATGATATCGTGAAGAAAAATGCTGATGGCATCAACCAG
CAAAAGAAGTTAGTTTCCGAGAATTGAATAAAAGGATTTCTTCTTTGGAA
GACGAAATTCAAACGCACAGCAAATCTTTAGAAGAAGTCAAACATTATCA
GATTGGAGCTGAAGCTTGCACAGGTCAATGATTTGAAGGAGGACATTGAT
GATTTGAAGTTTCGAAATGACCGTCAACGACAGAAGAATGACTTCTTGAC
ACAAGAGCAAGACCGACAAGTGAAGAATGTCTTAGAACAAGCGCATAACA
TTGCTAAGATTGAGGACAGCAAAGAGAAGGTCCCTTACCAATTTGTGGAG
AATGCTCTTCATCTGAAGTTGACCAGTATCAGAGTGGAAGAACAACTGGT
CGATGATGGGGCCGAAGAAGAAAGGAGGTGGCAAAAAAGGCAAGAAAGGA
AAATCAAGTGCAAAGAAAGATCCAGCTAATGTTTTGACTTTCAATGAAGC
TGTTCTCATGCACCAGGTGACTACAAACTTGGTCCAATGGAGATCAAATT
GTTATGCGTTTACGGCCAAAAGATGAACTTGCAACCTCAAGATGCGCTAC
ATGAAAACGAACGGACCGACGGAGTGAAGACATTCACCAAGTTCACTGCA
GAAGTAAACGAACTCACCATGGCAACACAAAAAGTGATTTGGAATGATGA
TTAAACGATTCTTCTTGGCTTGTAAAGAAGCACAACAAAAAGATGATCTC
ATGGACGAAGATGAGCCGACAAATACGCATGCGCTTGTTTCGTACAATCA
CGAAGATGACGGAGGTGAGTACGAAGAAGTCATTGCAGAGCATTCTGATG
ACGTCATCGATAACAATAATGAAAAGGAAGCTTTGATGTTGATGGATGAT
TATTTGACGGAATTCGATGATCTCCCAAAAGAGGTTGATCTGCATCGAAG
CCACATCAAAGTTGTGGAGAAAGAAGTCGAAATTCTGGAACAACACAATA
TCGGCATCATGGCTGACCTCTTTGATAAACAAATGACTGAAGTCGTTCAA
ACTAACTTGCCATACAGAATCTGGACAGCAGCACAGAAACGGAGTTTCTC
GATAATAAATGGCTTCATAAAGAGGAACATGGTCAGAATGTTGATAGCAC
CCACATTGAGCTTTTAAACAAAGAAATGAAAGACATGGAGCGATCTTACG
CCGAAATGACCGAATTCTTTGACAAGAGTTTGACCACCGCTAAACATGAT
ATCGTGAAGAAAAATGCTGATGGCATCAACCAGCAAAAGAAGTTAGTTTC
CGAGAATTGAATAAAAGGATTTCTTCTTTGGAAGACGAAATTCAAACGCA
CAGCAAATCTTTAGAAGAAGTCAAACATTATCAGATTGGAGCTGAAGCTT
GCACAGGTCAATGATTTGAAGGAGGACATTGATGATTTGAAGTTTCGAAA
TGACCGTCAACGACAGAAGAATGACTTCTTGACACAAGAGCAAGACCGAC
AAGTGAAGAATGTCTTAGAACAAGCGCATAACATTGCTAAGATTGAGGAC
AGCAAAGAGAAGGTCCCTTACCAATTTGTGGAGAATGCTCTTCATCTGAA
GTTGACCAGTATCAGAGTGGAAGAACAACTGGTCGATGATGGGGCCGAAG
AAGAAAGGAGGTGGCAAAAAAGGCAAGAAAGGAAAATCAAGTGCAAAGAA
AGATCCAGCTAATGTTTTGACTTTCAATGAAGCTGTTCTCATGCACCAGG
TGACTACAAACTTGGTCCAATGGAGATCAAATTGTTATGCGTTTACGGCC
AAAAGATGAACTTGCAACCTCAAGATGCGCTACATGAAAACGAACGGACC
GACGGAGTGAAGACATTCACCAAGTTCACTGCAGAAGTAAACGAACTCAC
CATGGCAACACAAAAAGTGATTTGGAATGATGATTAAACGATTCTTCTTG
GCTTGTAAAGAAGCACAACAAAAAGATGATCTCATGGACGAAGATGAGCC
GACAAATACGCATGCGCTTGTTTCGTACAATCACGAAGATGACGGAGGTG
AGTACGAAGAAGTCATTGCAGAGCATTCTGATGACGTCATCGATAACAAT
AATGAAAAGGAAGCTTTGATGTTGATGGATGATTATTTGACGGAATTCGA
TGATCTCCCAAAAGAGGTTGATCTGCATCGAAGCCACATCAAAGTTGTGG
AGAAAGAAGTCGAAATTCTGGAACAACACAATATCGGCATCATGGCTGAC
CTCTTTGATAAACAAATGACTGAAGTCGTTCAAACTAACTTGCCATACAG
AATCTGGACAGCAGCACAGAAACGGAGTTTCTCGATAATAAATGGCTTCA
TAAAGAGGAACATGGTCAGAATGTTGATAGCACCCACATTGAGCTTTTAA
ACAAAGAAATGAAAGACATGGAGCGATCTTACGCCGAAATGACCGAATTC
TTTGACAAGAGTTTGACCACCGCTAAACATGATATCGTGAAGAAAAATGC
TGATGGCATCAACCAGCAAAAGAAGTTAGTTTCCGAGAATTGAATAAAAG
GATTTCTTCTTTGGAAGACGAAATTCAAACGCACAGCAAATCTTTAGAAG
AAGTCAAACATTATCAGATTGGAGCTGAAGCTTGCACAGGTCAATGATTT
GAAGGAGGACATTGATGATTTGAAGTTTCGAAATGACCGTCAACGACAGA
AGAATGACTTCTTGACACAAGAGCAAGACCGACAAGTGAAGAATGTCTTA
GAACAAGCGCATAACATTGCTAAGATTGAGGACAGCAAAGAGAAGGTCCC
TTACCAATTTGTGGAGAATGCTCTTCATCTGAAGTTGACCAGTATCAGAG
TGGAAGAACAACTGGTCGATGATGGGGCCGAAGAAGAAAGGAGGTGGCAA
AAAAGGCAAGAAAGGAAAATCAAGTGCAAAGAAAGATCCAGCTAATGTTT
TGACTTTCAATGAAGCTGTTCTCATGCACCAGGTGACTACAAACTTGGTC
CAATGGAGATCAAATTGTTATGCGTTTACGGCCAAAAGATGAACTTGCAA
CCTCAAGATGCGCTACATGAAAACGAACGGACCGACGGAGTGAAGACATT
CACCAAGTTCACTGCAGAAGTAAACGAACTCACCATGGCAACACAAAAAG
TGATTTGGAATGATGATTAAACGATTCTTCTTGGCTTGTAAAGAAGCACA
ACAAAAAGATGATCTCATGGACGAAGATGAGCCGACAAATACGCATGCGC
TTGTTTCGTACAATCACGAAGATGACGGAGGTGAGTACGAAGAAGTCATT
GCAGAGCATTCTGATGACGTCATCGATAACAATAATGAAAAGGAAGCTTT
GATGTTGATGGATGATTATTTGACGGAATTCGATGATCTCCCAAAAGAGG
TTGATCTGCATCGAAGCCACATCAAAGTTGTGGAGAAAGAAGTCGAAATT
CTGGAACAACACAATATCGGCATCATGGCTGACCTCTTTGATAAACAAAT
GACTGAAGTCGTTCAAACTAACTTGCCATACAGAATCTGGACAGCAGCAC
AGAAACGGAGTTTCTCGATAATAAATGGCTTCATAAAGAGGAACATGGTC
AGAATGTTGATAGCACCCACATTGAGCTTTTAAACAAAGAAATGAAAGAC
ATGGAGCGATCTTACGCCGAAATGACCGAATTCTTTGACAAGAGTTTGAC
CACCGCTAAACATGATATCGTGAAGAAAAATGCTGATGGCATCAACCAGC
AAAAGAAGTTAGTTTCCGAGAATTGAATAAAAGGATTTCTTCTTTGGAAG
ACGAAATTCAAACGCACAGCAAATCTTTAGAAGAAGTCAAACATTATCAG
ATTGGAGCTGAAGCTTGCACAGGTCAATGATTTGAAGGAGGACATTGATG
ATTTGAAGTTTCGAAATGACCGTCAACGACAGAAGAATGACTTCTTGACA
CAAGAGCAAGACCGACAAGTGAAGAATGTCTTAGAACAAGCGCATAACAT
TGCTAAGATTGAGGACAGCAAAGAGAAGGTCCCTTACCAATTTGTGGAGA
ATGCTCTTCATCTGAAGTTGACCAGTATCAGAGTGGAAGAACAACTGGTC
GATGATGGGGCCGAAGAAGAAAGGAGGTGGCAAAAAAGGCAAGAAAGGAA
AATCAAGTGCAAAGAAAGATCCAGCTAATGTTTTGACTTTCAATGAAGCT
GTTCTCATGCACCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010310XLOC_010310Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018384-exon-sc0000297-1575043694:108803..108968TCONS_00018384-exon-sc0000297-1575043694:108803..108968Clytia hemisphaericaexon
TCONS_00018384-exon-sc0000297-1575043694:108145..108398TCONS_00018384-exon-sc0000297-1575043694:108145..108398Clytia hemisphaericaexon
TCONS_00018384-exon-sc0000297-1575043694:106736..106815TCONS_00018384-exon-sc0000297-1575043694:106736..106815Clytia hemisphaericaexon
TCONS_00018384-exon-sc0000297-1575043694:106153..106332TCONS_00018384-exon-sc0000297-1575043694:106153..106332Clytia hemisphaericaexon
TCONS_00018384-exon-sc0000297-1575043694:105841..105909TCONS_00018384-exon-sc0000297-1575043694:105841..105909Clytia hemisphaericaexon
TCONS_00018384-exon-sc0000297-1575043694:105093..105214TCONS_00018384-exon-sc0000297-1575043694:105093..105214Clytia hemisphaericaexon
TCONS_00018384-exon-sc0000297-1575043694:104536..104764TCONS_00018384-exon-sc0000297-1575043694:104536..104764Clytia hemisphaericaexon
TCONS_00018384-exon-sc0000297-1575043694:103853..104373TCONS_00018384-exon-sc0000297-1575043694:103853..104373Clytia hemisphaericaexon
TCONS_00018384-exon-sc0000297-1510915933:108803..108968TCONS_00018384-exon-sc0000297-1510915933:108803..108968Clytia hemisphaericaexon
TCONS_00018384-exon-sc0000297-1510915933:108145..108398TCONS_00018384-exon-sc0000297-1510915933:108145..108398Clytia hemisphaericaexon
TCONS_00018384-exon-sc0000297-1510915933:106736..106815TCONS_00018384-exon-sc0000297-1510915933:106736..106815Clytia hemisphaericaexon
TCONS_00018384-exon-sc0000297-1510915933:106153..106332TCONS_00018384-exon-sc0000297-1510915933:106153..106332Clytia hemisphaericaexon
TCONS_00018384-exon-sc0000297-1510915933:105841..105909TCONS_00018384-exon-sc0000297-1510915933:105841..105909Clytia hemisphaericaexon
TCONS_00018384-exon-sc0000297-1510915933:105093..105214TCONS_00018384-exon-sc0000297-1510915933:105093..105214Clytia hemisphaericaexon
TCONS_00018384-exon-sc0000297-1510915933:104536..104764TCONS_00018384-exon-sc0000297-1510915933:104536..104764Clytia hemisphaericaexon
TCONS_00018384-exon-sc0000297-1510915933:103853..104373TCONS_00018384-exon-sc0000297-1510915933:103853..104373Clytia hemisphaericaexon
TCONS_00018384-exon-sc0000297-1491911889:108803..108968TCONS_00018384-exon-sc0000297-1491911889:108803..108968Clytia hemisphaericaexon
TCONS_00018384-exon-sc0000297-1491911889:108145..108398TCONS_00018384-exon-sc0000297-1491911889:108145..108398Clytia hemisphaericaexon
TCONS_00018384-exon-sc0000297-1491911889:106736..106815TCONS_00018384-exon-sc0000297-1491911889:106736..106815Clytia hemisphaericaexon
TCONS_00018384-exon-sc0000297-1491911889:106153..106332TCONS_00018384-exon-sc0000297-1491911889:106153..106332Clytia hemisphaericaexon
TCONS_00018384-exon-sc0000297-1491911889:105841..105909TCONS_00018384-exon-sc0000297-1491911889:105841..105909Clytia hemisphaericaexon
TCONS_00018384-exon-sc0000297-1491911889:105093..105214TCONS_00018384-exon-sc0000297-1491911889:105093..105214Clytia hemisphaericaexon
TCONS_00018384-exon-sc0000297-1491911889:104536..104764TCONS_00018384-exon-sc0000297-1491911889:104536..104764Clytia hemisphaericaexon
TCONS_00018384-exon-sc0000297-1491911889:103853..104373TCONS_00018384-exon-sc0000297-1491911889:103853..104373Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018384-proteinTCONS_00018384-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000297supercontigsc0000297:103853..108968 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
38.2416	36.6055	126.739	148.376	95.7213	74.9173	30.3328	33.4476	38.1327	29.9242	33.5509	33.6347	9.59179	9.50996	6.56296	8.81914	12.9959	14.4996	16.266	18.0553	11.5635	9.63351	20.051	19.9841	54.1959	45.5276	15.2625	13.6044	13.1351	13.2121
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00018384 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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