XLOC_010307 (gene) - C. hemisphaerica

Overview
NameXLOC_010307
Unique NameXLOC_010307
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000297:353579..357727+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010307 ID=XLOC_010307|Name=XLOC_010307|organism=Clytia hemisphaerica|type=gene|length=4149bp|location=Sequence derived from alignment at sc0000297:353579..357727+ (Clytia hemisphaerica)
aaattaaaataggcAGAATCTCAGATCAGCATTAGAAGTGGGATGTTGAA
AGTAGACTAAGTTGCAGTAAGCGTTTTTGTGAGTCATTGATATGAGAGAA
ATAAATAGATTTTCCGAGAGAACAATTACTGAATTCAGCTGATTGACTCA
TGCTAGAGTTGTGTCAACTTTCAATAACACACCAATAGCTTCCTTGTATT
TCTTTTATGTACTGAACTTACTGAACACACGCTGGGATAAAGACTAATTT
TCTCATTATTTGGTCTCttggaaaataaaaaccaattcaattttttaaag
attcttgCTGTACTTTGGCACAAGTCTAATTCAAGATGGGGCAATCTGCA
GATAAAGAATCAGAAACAACATCGATAATATACACAAAATAATGGAGgta
tataatttatttatgtAATAATGAGTGTATTATCCTCCTTTGGATAAAGA
TCATGTGTTGcctgttttaaattttaaatgagTTCAATGTTAGCCAACAT
ATTAGGATAATTATTAGGAAGTCTTGGGGAAAATAAATATCATTGaattt
tttgagttattttaTTCTTAGTGCAAATATCCTTAAATgacattcttatt
tttctaaattttgatttttgagacctgagatttttttacaaaaaattgga
TGGCCTGGGATGGCGTCATCCGACTCGATTTTCCTATAACAcgctaactt
tttttcaaagcttgTTTTATATCCTATTAACCGCTCCCAATAGCTCTTtg
tcatgattattacttctctcatttgacaaaaattcaatcccacaatcctt
ttcgtctaAATTGAAACGTTATGAAAGTTGATACaatttctttgtaattg
agtgtaatttggGTAAAGGTAATTAATGCAAAGGGTGACAGGATTGCAAT
TCGGTCAAAcaaaaaatcaatgtctatttttagatttgcCACGGTACTGT
ATGCTATTATGTTTAATTTTGGATCTAATAAGGGGTCAACCAATAGTCTa
ttatattcatttttttttaatagagatTTTCCTATTTTGGTGACGTTATT
GGATCCAAAATACCTAATAAGAATCTAAACATTTCGAAGCATCATAAAAC
CCTTCCATTTTATTCCCCATAGAATTCCAAATCCAATAAGGGGTCGATGA
CCTTTCCGctccttttcaaactcaaaatatctcaaatctctattgtcatt
ttacccCTGATATTGTCAATGGTGAATTTATGAATCTTGGATCTTTTAAA
Agaggggtttggaataagcagggtggttggaaaaattctcaaaacaaaat
aagtGGAGGGGTTGGAATAGAATGATCCTGActggaaaatatttgaaaag
gaggctaataaaTTAGATTTAGAGCCAAAGAGGGACAAAAATTACAGATG
GGCTTCTGGTAGCTTTCCAAACCTAGGTCAACTTTCATAAATCTCAAAGC
TGGCTCTTGTGTGAAGCAGTGTATTAGAGgtgtttttttgttgttaatCT
CTAAGGGCTCATCAGCGGTTACAACTGGACTACTAtgttgaagatgaaga
tgacaTTTGGGGATTTTTCGGTAAAATATTCCTCGTTAGCTtgattatta
tttattttttatttattcatagaattatatttcacaggtctatcgacctc
tacgaaataattttagatttataaattgtctaattcttcatctgtcgtcc
agtcgtcggaagatatggacagaagagaagacgttgttttggtctttgtc
ctaggttttcgaactaggcgaaggtttgttctagggcttcctcttacatg
ccaaacgaaatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNtttttgattttgctaaatttca
accatttttgaagaactacacaaaatgcgtgttgactaactgacgtcaaa
taataacCTCTTTATTTTACGATACCaagcttttcaaaatttaattctCT
TTAACTTCTTCGATCTTAGTATATTGTTTATGTAAGCACATCTTGGCCAT
ACCTATGTTATTATGAAAAGACATCGAACGAATGATAATTTACTTCATGA
ATTTTGCCCTATAaatttacttgatattttatttttattttgaaccaATA
AAAATCAATGATATCTCtttttgtttgcattttagATGTTCTGAGGCTGT
TAGAAGAAGAGAATTACGAAAAATTTGAGGAAGTAATGAAAATTGATAAT
ACGTGTATAAACAGATTGGTATATGATTTTGAAGATAGACCAACAATTTT
ATTGTACGTTCTAGAACGTGAAAAGGATCATTCAATTGTAGAGTATCTTG
TCAATCATGAATATTGTGATGTCAATGTAATAGACTGGAGGGGTCAAAGT
CCGTTTTATTTTGCTGTGCAGTTGGAGAATATTCCAGCGGTAAAATGTCT
TTTAAAGCGAGACCCAAGTGTTATTAACAAAACAACATATCATTCTTCTC
CATTGCATCGTGCAGCACGATCAGGAAATGTTGATCTAGTTAAAATTCTG
CTGGAACAAGATAATATCAATGTTAATATAAAAGATTATTACAAGGAGAC
TGCCGACCAGCAAGAACATGTTACCCAAGAAATTAAAAACTTAATCATAA
AGAGAAGGGAGAAGAAAAAGTAACAGTTTGTTAAAGCCTTATCAAAAGGA
AGAacttttggcgggaatttaatttggggGGGGTGTCGAAAAAGTTTTCT
CAGAGGAGTTTGATTTTGGGTAaatctgccaaaatttctttttgccaAAA
TTCCTATTAGGGACTTGAAAATTGATTATGTAAATTtacatttatatttt
atttatcatGCTTACTTTAAAGTGCTCTCAAGGTCCTGTAGTTGGAAAGT
CGAAAAATCATTGTAAGGGGAGAGCTTTTTGAGGGCAACAAAGAGTAGGC
TATTCTTTTTTGATCTGTTTGCTTTCtccttttttgtaaaattcgGAGCA
CCTACAAttttcaacttcagttgagctagaatctgagaatgtctgtttC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00018381TCONS_00018381Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00018381-proteinTCONS_00018381-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000297supercontigsc0000297:353579..357727 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.38	4.39	1.81	1.42	1.03	0.56	1.96	2.13	2.27	1.76	3.12	0.7	2.31	1.11	0.5	0.44	2.08	1.98	1.15	1.65	2.86	2.22	3.08	4.07	1.34	2.58	3.47	3.4	3.83	3.86