TCONS_00018381-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018381-protein
Unique NameTCONS_00018381-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length145

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018381-protein ID=TCONS_00018381-protein|Name=TCONS_00018381-protein|organism=Clytia hemisphaerica|type=polypeptide|length=145bp
MKIDNTCINRLVYDFEDRPTILLYVLEREKDHSIVEYLVNHEYCDVNVID
WRGQSPFYFAVQLENIPAVKCLLKRDPSVINKTTYHSSPLHRAARSGNVD
LVKILLEQDNINVNIKDYYKETADQQEHVTQEIKNLIIKRREKKK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010307XLOC_010307Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018381TCONS_00018381Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 85..115
e-value: 3.0E-4
score: 30.1
coord: 52..82
e-value: 5.5
score: 16.0
coord: 17..48
e-value: 170.0
score: 10.7
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 85..107
score: 9.644
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 13..64
e-value: 1.3E-6
score: 28.0
coord: 65..126
e-value: 9.9E-14
score: 50.8
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 30..117
e-value: 4.8E-14
score: 52.6
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 45..107
score: 15.777
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 22..123
NoneNo IPR availableCDDcd00204ANKcoord: 23..123
e-value: 2.67698E-17
score: 72.4162

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00018381-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top