XLOC_009674 (gene) - C. hemisphaerica

Overview
NameXLOC_009674
Unique NameXLOC_009674
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000264:354977..359121+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009674 ID=XLOC_009674|Name=XLOC_009674|organism=Clytia hemisphaerica|type=gene|length=4145bp|location=Sequence derived from alignment at sc0000264:354977..359121+ (Clytia hemisphaerica)
AGAAAACCAGTTTTATATAATGTTATACTTTTTTATTACTCTGTCACTTG
TTTTATTGGGAGAATAAACTGTTTTTTAATAGCGATactaattttttcag
aaaaaatgtaCACAATAAATCTTTATTGCTGGGTCCTTATATTGGTCACA
GTGTTGATGTATTGCGTTGGTTTTTTTGGCGTTATAACTGCATTCATCAG
ATATCCGATACAAACTGGTGTAGTTCTCGCTGCTTATGTGGCTTTCCATC
TGTGTGATGTCAcacttgtttacttttttcacaGAGTATtggaaaagaaa
atatatcattGGAGATTTTTATACGCTGGTAAGTTTGATGAATAAAATCA
TTGATATCAGTTTTCCCCTCTATAACTTTGATAAGTGTGACGTATCCATT
CAGGATGTATAGTACATTGACCTCcgagcccgaagggctagacttgagac
tcctggatgggaaacgaagccacttatttcccatcctaaacacgtgaccc
gcgtggttttcacacaaacgctggattgaaagtaaaacatatcgccagat
ttcgaaaaatatgccgcgtgaaaacaaagaaaagcgCTAGATCCATCATT
CTAAAATcctaaggcttcactttttttgcttgagaaaggttgaagattca
tctctagccccttcggggctttgaaatGTACACACATGTATGTATGCACA
TACTTATTCCTTTGCCAACTCATTCATATCGCATCTTATTACTTTAAAgc
aagaaattttggcggatttggcggattcaGCCGAAATCCACCAATATAAG
TTCCGaccaaatttaaattattgtaTTTTTCCTCCAAATTTGTACTATTT
CAGGCCTTTGAAACAAGTTTTCTGCTTATTTAACACTTGTTTGATAGCGT
TTTCTTGGCCGAAAATATCCTTCATCCTCCAAATTAAATTCCAACCAAAT
TTATTTTCCAGCAATGTGGCAGACATTAAATtccctttgaaaaaactttt
cagacCTATTGACAAATTAAactcccaccaaaatttcttccatcTGAAGA
TTTGACCAAAAACCTGAGTTTACCATTCGATTTAGAAAAACAGAGCTCTT
CGAAATTTCAGAATTTCTAACTTTGAAGCTCGGGTCTTATTGAGagtctt
tttaaataaattagaCAGACTTTCCATAAACAAATAGCCTTATGGCGAAT
TATCCTAATTTATTATCCGTTTTAGAATTCGCAGTGAGCTTTCTTGTTGC
ATTGTTACAAACATCTGTTGTTGCAACAAATTGGTTTACAACATGGGCTG
TCTTGTCATTCGTTCACTGTTTGATCTTCAACATAATGAAAATCTTCACA
TCCTCTGACGAAAATGATGTCCCAAGGGAAGAAAATGACGACGAAAATGA
TGTCCCAAGGGAAGAAAATGACGACGAAAATGATGTCCCAAGGGAAGAAA
ATGACGCCGAAAATGATGTCCCAAGGGAAGAAAATGACGACGAAAATGAT
GTCCCAAGGGAAGAAAATGACGACGAAAATGATGTCCCAAGGGAAGAAAA
TGACGACGAAAATGATGTCCCAAGGGAAGAAAATGACGCCGAAAATGATG
TCCCAAGGGAAGAAAATGACGACGAAAATGATGTCCCAAGGGAAGAAAAT
GACGACGAAAATGATGTCCCAAGGGAAGAAAATGACGCCGAAAATGATGT
CCCAAGGGAAGAAAATGACGACGAAAATGATGTCCCAAGGGAAGAAAATG
ACGACGAAAATGATGTCCCAAGGGAAGAAGATTGGATTAACTCAGTCAAC
CGTCAAATATCGACTAGACCGGAGATCATCACATATTGTGAAGTCATCGA
GCCTAAATTTTACTTTTGGTCATCAAAACAAGTCATTTGGAGGGAAGAAA
AAGCATTTGAATATGACTACTGGATAGCTTTAACAGACACTTCAAAGATC
GGAAAATTCCAAACTGCGTGGATGGTGAGGGTGGACTTTGATATACAGTT
TGATGATAAAGAAACAGAGAAGTTATACAAAGAACATGTGAAAACAATGT
TACACGAGTTACCAGAATATTGCAAAAATGCAACAAAGGTTACCAAGACT
ATCATGAAGATAGAAGGGAAAAGCGCAGATGAAATTCAACTTTATTATAA
CTGGCCAAAGATTTTACAAGCATTTATATCCCCTATTGTTCGCCTCATCA
AATTATACAGCTGGATTTTCAAGAAACCCTTTGCTAATctttttacaaca
agaatcgtCATCACAAAAGTTATCTCAAACAAGAACATTGAAGTCGTATG
TTGATTAAAATCACTTTCTTGAGACGAGAAAGATTGGCAGGAACGCTCAT
CATTTCATACCAACGTCCACATAAACAATcagaatgaaattttaaaagac
aaCTTTTTATACGTaaattttgaatgattttatcttttaaacactttttt
ttttgagcaaCCCCTATTTTCGGGTCAAGGCTGGGGTTGATTAGCATTCT
AGCTCTTTGTTgtctgaaaaatttgctttgaccacccctgatatttattc
atttttttaaggTACATAGAATATCAACGAGAGGTATTTTTTATCATTGA
AATCATCTATTTCCACCAAAGATATGTTTAGATCATGGAAAAAGTTAGTA
CTTGTAATTTATACCTACCATGGACTACCTACACAAgcaaaaatgttgaa
tattaCAAGCTTTTTCCCAGACGTGGGTTTTTGCCCGAGGGGGGAAGGAG
GGTACTTAGTCAAAATGGGTGCCccatgtgcgagccataagggtcccttt
ttcaaagtctctcaaaggggtacaaaaaccattaaaaagaaaattgggtc
tctgtaagggtcccaAATTCACGAAGATTgaaatttcctctctcaaagtg
tcgcgtttttcagaaatttgaataaaaacaagtgaaaatcgacaacaatt
ttgagaaaagtctctctaagggtcccatAAACGCCAATATTTCCTCTTTA
AGGGTCAATGTttgatttttggctcggacatacccgtcacctcgcaaacc
tagtacccccaggGGGTTCTGTCTGAGCCGAAATGCTCATAGCATCAAGC
CGGAACAAAAAGAAGTATCCTTGGATGGCTGTAGGGCAAAAGGATCgaga
aaaacaaaactttaaGTTCCAAAATTTGTTCCTTAAAATAGACTTTaccg
gagttttttatttttctaaataagcgatgcattgtgggattgtttcgggg
gtattacaatagaattccctcgaggaattatTAAGAGATTTCTATTATAA
TACCCCCGAAagaatcccacaatgcatcgcttttttagaaaaatcaaaaa
ctccgataagatctattgtcAAGAAGTATACCTTGTTTTTCATGGAAGAT
TAGTTCATCAGCTACCAATTGACATTTCTCATTCGGTTTCTTGACCAGTT
TTGATTCGTCAATCTGGTACGGAAAGTTCATATGATGTAGGTCGGTATTG
TCCatgcagattttcatttttttcttcaatccaTAGTTCAGCAACATGCT
TTTTATGGTACTAGAACCTGAAAAGGGTgatattttcattattcatgata
tgcaccattgaaatgtcttccacggacccaatagctgattggttgaaagt
gacgtattgtcAGATATTACGTCACTTAaatcaatcagctattgggtctg
tgatgtaatgtcaaaagacattgcaatggtgcatatcatgaataagaaaa
atattgacagaaagAGAGATTTTATGGAATATTGTTGACCTTACGGTACG
AGTATTACGTAGTGCATAATTAtaggtaaagaaaaatatttaaaaagggT
TTGTTATTTGCCATTATTGTAAAAATAGAAATTACATGTGCAGTAACTTT
TAGAAAAGAAACAAAGTTATGAAATAacattttacctgttttttgtattt
tgatataaaaaatcGAAACATTGTTGTTCTGTTTGCATGACGACATCTTA
ACAAAGGATGGTGTCTCATCCTTCGTTAAGAGTTTGTTGCTACTAGCTTG
TTTGGATGACTTTGAGAGAAGCACATAACCAACTGCCAACATTAGTGTGG
ccatgaaaaataatttatgtttGTTTTGCCAAAATGCTTTGCCCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00017289TCONS_00017289Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00017289-proteinTCONS_00017289-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000264supercontigsc0000264:354977..359121 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.12	0.15	0.2	0.69	0.49	0.34	0.57	0.51	0.31	0.33	0.3	0.61	1.05	0.83	0.63	1.43	0.67	0.59	0.34	0.64	0.84	0.7	2.23	2.15	8.41	6.47	1.53	1.67	0.31	0.16