XLOC_009194 (gene) - C. hemisphaerica

Overview
NameXLOC_009194
Unique NameXLOC_009194
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000240:68941..72521+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009194 ID=XLOC_009194|Name=XLOC_009194|organism=Clytia hemisphaerica|type=gene|length=3581bp|location=Sequence derived from alignment at sc0000240:68941..72521+ (Clytia hemisphaerica)
TTTTAATTTATCTTTTTAGTATATCTGTCATCATATGATTGTCTAAATTT
GTCATGTATAGTTTATATATGATTTATATTTGTCTATGTTTATGAACTAT
TGTAATTAGGtattaatgggataaactttcgcagggattaaatttcgcgg
ttgggcatatcctcgaaattcaaaaattttgtggagacttaatttcgcgg
gtgacactattgggtggcaatattttcacgatttcgtgacttttactgtc
aaataatgcatgttggttgttgaaatacgctTTATTTGCGCTTCTTTCAT
GCAAGTAGCCATTGAAATAGTATTTATTAGACatttattttgagttttgt
ttagaaatatttcgcggagcccattccaaatttccattgggacttaattt
cgcggattttcgcggatgacacccaaatccgcgaaatccgcgaaatttaa
tccccacgaaagtttatcccattaaagtactcaTTCTACAGTACGGACCT
CGCGTTACAAAGATAATCCAATTGTCTCCAAGAGAAAGTAGTCATGCTTA
ATGTTTGGAATTTTGTGTACTGATAAGGAGAAAAAGTTAAGATCTTTAAA
AACCTTCATATATGAAACTTTAAAACGGAACTAAGGGGAAATCAAATCAT
GACTCGATAAGGTACAGGGAAAATAATCCAACTTCTATTCGTATTTGTGT
ACGAAGTTCTCTTCAGTTGGAcgactagactatgtaaaacaATATACCAA
AAATGTGACAAAAAATTATGAGTGGTTAATAATCTCGCCAGTTTTTAAAT
ACttgaaacaaagaaatattGTTCGCCATTCTTTCTTTTGTATCATCCAT
CAGAAGTCACATCCATACAGTGCGTCCGGAAAAAAgcagaacagatttta
gaaTAATCAATATAAATAATCAATAATTAATAATGGAATTTTTTGCTTAT
TCAAtgcaatattcaatttccaagGTAATAAATgagctttgaaaaaaaga
tGAGTAATTAGGCCATAGTATGTGGCTATCGGGAGAAGCAGGAGTAAGAG
GGTCTATCGCCTTTATTTGCAACCTGGGGGATCGCATGCTTAGCGGGGAG
CGAAACACCTATCCAGCTTCCAGTTACGCTACGTCTTAAAAACTTATTTG
AGGATTTTAGCTCATTTCATCTACGTGCCTTTTTTCCGGACAAACTTTAT
GTGTAGCAAACATCGTTATTATATCGTATTATCTCGACgtatttcaaatg
ttttttgcTTTCTACATACGATTGCACAAGAGTTTCATTTTACATGGTGG
AACATTTTAATGTGAAGAGTTCACTTTGACACGATATCTTCCACGCAAtt
agacaaacaaacaaaaaccaTCAATAATCTCTGTGTTGCTCTTCCAAAGT
TCCGTATTTCCCATGTTCAACTTTTTGTTCGtcaatttctttcaataaaa
ttgcAATGTCAGCACCTATTTTGACGCGCCTCATTTGCCGTTTCATCTGA
CGTTTCGTTAACGTCACTGGCCGCTCGTCAACGTACGTCCAATCAGGGAG
GTCGGTCAACGGACCATACGATGTCGCGTCTTCCGCTTGCCCACGTAAAA
CTCTTGACTTCCCTCCTGCCAGTAGGGCGCTTGAATTAGACAACAATCGA
CATTGAGATGCAATGAAATTCTGAAGTGCATTCGTTGGCcggaataattt
caatgacattTTTTTAGTTATTCTGTTTTTGTTTAGTTATTctaaaagat
aaataaaaatcaatcaatcaatcaatcagtcaatcaatcaatcaatcaat
cagtcaatcagtcaatcaatcaatcaatcaatcagtcaatcagtcaatca
atcaatcaatcaatcaatcaatcaatcaatcaatcaatcaatcaatcaat
caatcaatcaatcaatcaatcaatcaatcaataaaacaaAGAAGACGTCC
TAACCATTTTAAGAGCAGTAGACAATAACAGCACTGAACTTTTGTAGTTC
tatacaaaataattttaaatatgattgaaaaaaaataaaatttcctaTAT
ACAAAAATCCATCAGGTTAAAAATAATGCATTACAGACTAAAACTTATTT
AAcgaagacaaaaattttttttcttttaatctaAAATATTATTTGAACTG
AACCATCTAATTAGCTTTCCAAGTTCACCATTAAAGTTTTACCATACTGA
AGATCAGCTTAATTGCATTCCAGCTCTTCACCAAAGTTaaccaaaatgtt
aaaataattttatcttATGATCAGAGATCAACTAAACGTATTTAATTCGA
AAATTACCAAGTTGATCCATAAAATCCTTCTGGTAAGAATTATCAGATAT
TGACATTGAAGAAAGACACGTTTTCCCGATTCGCCTCTTTGCTGCACCAC
TATTCAAAACAACTCATCCTTCTTTCCATCACCTATGCACCCTGTAACTC
GATTCTGAAGGTGCACGCTTGCTCCCATTTTCTGAACTGTTGAAGTTTGG
AGAAGGTGGCATCCACATTTTCTCTTCATCTCTTAATTGGTTGTTGTGGT
AAAACGACTTTTCGCCTCCACCAGTAGGATTGTTGTATCTCTGGTAACGA
TCGCTCTGATTGGATGACTGCTGAAAACGACTGTTTTGATTGGACgaagt
tgaaaaattatcattttgattggAGGGCGGAGAAAATTGAGAGTTTTGAT
TGGCTGATTGAGAGAATGGATTTGTTGAAGAAGGCGAAGAGTAACGATCA
TTGTGATTGGGTGAAGCATTTGGAAGTTTGGACANGATCATTTTGATTAG
AGGGGGGAGAAAATTGAGAGTTTTGATTGGCTGATTGAGAGAATGGATTT
GTTGAAGAAGGCGAAGAGTGACGATCATTGTGATTGGGTGAAGCATTTGG
AAGTTTGGACATCATGGAGTAAGTAGGGGAGGTTTGTAGgccattgtttt
gattgttgAAGGCGAGAGGAGAGGGTTGAGGTGTTTGGTAGTTGTTGGAA
GGTTGCTGTTGATAGTCCAAATATTTCGATTGTTGTGGGTAGTATTGTAA
GGAGGATGGCCCAGAATATTGTTGTGTCAGCGGCGcatgaaatttctaaa
aaaaagaaaaaaacaagtgaAAGAACTTAGTAGTTAGGGGGTCTGATCCC
CCATCTCCACCTCCCCATCCTTGGCATTGACCTCCAACTTGAAAAACAAT
GATCCCACAATAAAAGGGAAGAATAACTGAATAAAtagaatttctttgaa
aatgcttTATCGAAAAGAAAAGATTCAGAAAGCCGTCGAATCACGAAACA
TAAATCTCCTGATCAGGCCTTTCAACCTACATTAGGACGAGATGTGGAGG
ACACAGAATTGCTCCTTCCCTGAGGTAGCCCTCCTCCGCCATTTCCTCCT
TGATGGAACTCCAGATCTTTAATGCGACTGTTGATGCGTTCTTTTTCTTG
CATGAGCTGGCAATATTCTTGATATTCTCGCTGCTGGTATTGCATCTGGA
CATTGAAAGGTGAAGGAGGATGTTAATGAAATAAACTacagtatttttct
ttttagaatgAACAACTGGATTAGATTATTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00016460TCONS_00016460Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000240supercontigsc0000240:68941..72521 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
20.05	18.48	18.53	19.87	1.03	0.56	2.16	1.03	1.01	0.56	0	1.47	0.23	0.27	0.14	0.21	0.93	0.63	0.08	0.2	0.93	0.71	3.2	0	0.19	0.17	0.52	0.66	0.13	0.24