XLOC_009085 (gene) - C. hemisphaerica

Overview
NameXLOC_009085
Unique NameXLOC_009085
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000232:324372..335396+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009085 ID=XLOC_009085|Name=XLOC_009085|organism=Clytia hemisphaerica|type=gene|length=11025bp|location=Sequence derived from alignment at sc0000232:324372..335396+ (Clytia hemisphaerica)
TGAATTTCATCTCAATTTTGTTTGACACCAGATAGGTCCCAAAAATATTC TCCTGCTTATGTTTTTAATTACAGGATTCttgattttaataaaaaagaaa catggGTCGTAAATCCTGGGGagaattaaaagaaagaaagaagggACCTG GTCGCAAAGCAAGAAAACAAGAACATCCAGAAGAAAATTTACCATTTCAT TTGTGTGAGTAATATTAGATATGATTTTTGATTGGcttttttgtatgttt tagTTACACATATACACACAATACATCAAACttattactttaatgggata aaatttcgcaggTATTAAATTTCCCGGATTTGGATGTCATCCACAaaaat ctgcgaaattaagtcccaatgaaAATTTGGAAGGGCAAGGCttgaaataa cgatttcaagtgggtcagacaaaatgtccgatcaggcttgctttagcttg aaaattatgatttttgggtcggacatgaagctatttgggttggacaatgt ccgatgtccgatcgttatttcaagccctggaagggcctcatccgcaaaat taagtaccCGAAATCTCTTCGTTATTTCTCGAATTTTTGCACACtaacat atcaaaattttgagagaaGTTCTGTTTGCTACCccgattttgcaaaattt ggaatcactttagaaaaattagattgaATCTTGATCCGCAAAATTACGCA AAAAATCAGGGAACTCCTCATCCacaaaattaagtccccgcaaaattttt gaatttcacggatccgtgaaatttaatccctgcgaaagtttatcccagtA AAGTATACATTTATACATTACTTATTATCAGAGATGAAGCCAGTGTATAT ATAATACTGCAAATGCAATGCAAAATGTTCACTTGCTCCATCAATAATAA ACcctatttgttttgatttattttcaacaCTCTGAAGCATTCTGAATTGT CTATCTAGATTGCCTATGCAATTTGACAAAGAGgacatttttttattcta taCAATCAACTGACATAACACCCATTCATTTTAACAACTGCAATGTCTTC ACAAGCTCAGCATTTTTTCAGAGCAATTCAGACCTCTCAATCCAAGCAAA GTACATatcactttttggacctaccccggtggaggtcctataaattaacc tctgttcgtccgtttgTCTGTTAGTTCTTCCGTTAGTTCGtgaccaactt ttctcgagattggctcattagtttttcctgatttttggcacaatgatgca aaatggtgatgcCCAAAATTTGatggagctcgattttcgaaaaaaaatat atttgggcaaatttgggccaaaaactgcctaaaaatagggttttttggac tttgtgcaaaatcctgtcattacttttttctgattttttgtacaaagatg gagggcaaaattgtctaaagaatggctgaagtgatttttcccggaaaatt cttattcgccttaaaaaacagattttcgtattttggggaaattcccttta accaaataagaaaatatagcttttcNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgaagcctg attttcaaaaaacatttttttccggccgaaaatgctggaaatgccggaaa aactggttttttggcattttctcaagatgttttcattggtttttcatttg attttttgctcaaagatgtgcATTAACAATGCcctaaacatggccgagtt cgatttttgagaaaaaacttttttcattggattttttccttatattcatt tctatgttttttacacaaaaacattattgataacaatgctcaccatcaag catgattcaattgtcaataaaacNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNattttctgactgatttttttt catttttctcctcgcattgctatctaactttcatcatcatgtaggtccat tcagcatctaggtTGTTCCTATTGGTCTCATCATAAAGATGCTTTTAATC AGTTATTtgtcactttttcttttttcagtaaATGAAGAACAACAGaagaa tattttgaagaaacgaaaaaaggacaaaaagtagctaataaatatttcct ttgttttcaagatattactttctcaaaaaagggCTAAAAGCAATCTCTTT TTGGATGCGTTATTGTGTTTAGCACTAAATGTCTTTATAATATGTTCTGA AATATGAATGACTCTTGATATCTTAAGATATGGTGTGCCAAAGGAAAGTG AGTGCATTATCgaatgtttttcaaattttattaataGTCTTTTAAGGAAG AAATTGCTTGATGCTTACTTTTAGAATAGAATTGGAAATCATGTCATCTT AGATGAACTtatcaaatttcatgtttataaaAGGACTAATTACTCCTTTa caggaaaatattttaaaaaatgtaaaaaagctaATCAGCTTTATTGTTTT CTGTAGGAAAGTCAAAGAAGAAAAGatagaaaagaaaattgagtctAAGG GTAAGTCATGTTAAAAGTAATACGTGTTTTGCCAAGCAATTTTTCCATAC TACAAAAAACACACATTGTAACTTTTCAGATTGGCTAGCTTAAAGGATGA AATTTTGTGGGAATTAAATTTTGTGGATGGTCAAATAAGTTTCCCTGAGG TATGATTTGGCAGATggctgaaaaaataaatttgatgtGAGTTTGACTTG GCGGTTGTGGATGTTTTTGTCCAAAAATTGTTAacaaataagcaaaaagc tctttttaaggcctgaaaaaGCACAAAATTTGATAATGTATGATAATTAT GAATTCAATTTGGTAAATGAcgcaaaaaaacaaattttggcaGGAGTTCA TTAAGCAGATTCCTGGTGAAATCTATCAAATCTggcaaattttctttctt aaaatttcttttttatggaatttctaTTTTGCACTGGTTTGAACCTGTCT AGAGGTCTGTACCaatcatgaaaaaaaagttcttgaGAGCTGACCAACTT AAGAgtcattttttctaaaagtcttcagggtgtgatacctcaccctcttg gattttgctgaaatttggaccaaatgtTCACACAAGgaaataagaccctg aaaatttcaccttgatatctcgaGTAGTTTTGAGGATACAGTGTCTCAAA GATAGgatactaagcgaaaattgacccctaaaaatcatgaactctggtgg ggagcagatttctTTCagatttgaaagccaatgaattttcactcaggtac attagaaagctgatttacagtggatttcaagaactttttgtagggagtca gaaaaaatcaaattgagtctccaaaattttccccgaaagtctctagcacc tcctgtagagggcttcaaactttccGTAATCttggtttggaagcactttt agctgtctcCTGATGGTCCTTGTGACTTTTTGAAAGCAAATTTTTGAcat ggagtggtttactggagggttttggccacaaaaataacattttcaggatt tctatttttgcgtaaccgtcaaaaatggccgaaaaaattgctattatggc agatctggagcaaaattcaagatggcgtatctttttgaaCCGACaacact tttttttgaaactttcagctaggcttccttagtaggtctagtttatagcc tcGAAAAATCTCAGTGGGGGTTTGAAGTCTCTTGAAGATAtgattgattg aaaattttgcttaacttcgttgttttttccTCTTTAAATGCTAAATCAGG TCCACTTGGGGGGCTCTAAAGGTTAATTCTTGTCAAATTATTGGTTGATA TTCTCTAGgcaactaatcattggcattaagggaacaactgcaaaagattt caggtcatttccatcaacagatgacattttatggcagtttctttattttt aagtacagaatatgtaaaaatATGAGACTGGCATCTGGtctttcctacca ttccagggcctatattttcaggaaaagcctcaaccttttacagtttggtg aatattcATCTTAAATATAAACAGCTTACTTCAACTAAATGGATTTAACA GTACTTAAATCTTatctaaaaacttttttgactcattcgaaaatcctact ttgacaataatttgcgctttaccgcaaaacttctaagtTTAAGTGTTGTG ATTAGCttctgttgatggaaatgacctgaagtCTTTTGCGTTGTTCCCTT AATACCAATGATAAGTTGGCTAGAGAATATCAACCATTATTTTGACAAGA ATTAACCTTTAGAGCCCCCCAAGTGGACCTGATTTAAAGCTTTAAAAACC AATGCAAGCCGAATTTTAACAATCTCCATCAGTTTAGCAACAAATAAAAC TAGGTTGAGGAGCAAATAGCTCACTTATAACTAACCTTTCACAAAGCATT CTAATCACATCTCAAtgtttgaatttaaaaattcaCAACATGCGAAATAC TGTGGAATGTTGTGACTTGATGTCAAAACAAAATTCCAAACTGAGGTTAG ATGAGTGAAAGACAAGGAGAAGGAGGATGATAATGGATTGCGCCTTCTTT GGGTTATGGAGGGATTACATTATTTAAAGGTTTAATTTATACATGTGTAA TTTGAGATTGCAATGAAAGGAAAGTAAAATTGATACATTGGGAATGCTAG TTCCAAGGAGtttgcaaatatttttatttttaaagcaCTTAAACTGCCAG CAACCAATTTTATTTGCAAAACCGGCATTCTTTACCTCAAACTGGTAGCA ATCATTTCTCATGCTAAACAATCTATTGAGACTTGACTGCTTGGAAACCA ATTAAGATGGGTTTTTTAAACTGATagcaaaaacaatcaaaattggTGTT ATGGAAATTACTTGGCAAGACACAGTTTCACTATAGTAACATTAATGTAG TATCATTTACTACTTTTTCATTTACTTTTCCATAGGCAGTTTTTTAAGTT TTCCTAAAACAAGGTGTTGCTCAAAATTTCCATCCAAAGTCAACAGAATC ACATCATTATTAAATTTTGTATTTCAGAGGAAAATCAAATTGTCGATTTC ACAGCAAATAAAGATGTCAAACCCAAAAAGGTAACAATTGGTTGCTTTTG TTTTTATGGTATTTATTGTGCACATATTATTTTTATCATGTATGCCCTGA ACAATTTCGACTCTTGGATTTTACTAAAGCCTTTGACCTNTTGTATGCCC TGAACAATTTTGCCTCTGAATTTTACTAAAGCCTTTGACCTGTCTGTCTT ACCTTTTCAGCTTACAAAGTGGGAAAAAAAGAAAGCCAAAAAGTAAGTAT TCTAAGATGTAGCTGAAGATTATTTTATTCCTACCTCCTTTATTTTTACT ATTAAGTTTCGTTCTAACATAGCGTCAACCCCCCTGAATTGGGGGTTACa ccaaaaaaatgcaaatgaaAACTGTGAGCTAAAATACAGCCatatatttg gggggacctgaTATGTTTTCGGGGCCCAGAATTTCctatttttttgcctt tttatcaataaaattttattattccaTTCAAGGTTACAAGCAAAGAAAGA GACAACTATCTTTGATTCAGACAGTGAAAATGATtatgatgaagaagaag ataatGGTATTTcacttcaattttctttaataCACAGCTAAGAAACCCTT AAGTAATAATGACTGCTTTATTCTGGCAGGCATTCAATTGATCTTAATGG TTGTTTCTTATATTTAGAAGGAGACAAAGAAACCTCTGAATCTGAAGAAG ATGAGTAAGTTGAAAGTTTCCTTTTTCATTCCAAGATACCTTTAATTTTA ACCAATGTTAAACACACTGAAAAGACGTTTTCAAAAAGCTTGTGTGATGG ACTTGCTACTTTCAGNATTTGGCAAACACACTGAAAAGACGCTTGTGTGA TGGACTTGCTACTTTCAGTCATGATATCTCTTATTGTAATTTTCACCTAA TTTCAGGGGAATTCAAGATGAGaataaagaatggctgaagctGAAGAAAG ATGGTGGAGAacgtgaagaagaagaagaaagtgaagaagaagaagacgaG GAAAGTGGAGAGGAGGAAGAGAGTGATGTTGAAATGGTTTGTAGtttgtt tttcagaaaatattcAGTATTTCTCCTTTCATTAAAACTCATCATGGTTC TGCATTCATAAAAGTTTCAGAAATGTAaatgaaaactcaaaatttttgaa agatagtTCTCATAACAATCCCTCTTTATTTTCAGCCTGACGACGAATTT GACAtggatgaagatgaagatgaaagcGACGATGATGAGGATGAGGAGGG GGATGAAGGAAGCGGTGAAGAAGATGAATTGCCTTTTGAGAAGAAAGCTA AAAAGCTGAAAGCtgctcaaaagaagaaaaagtaacaactaagaaataaa ataaaataacttgattttttatcaCTGAAAAATAAGTAGTTGAGTCAAAT TTAAATACTGCTCCTTGGTGGAgactcaaaatttaaagtttgaagtatga gtttgaaaaattttaaggtTAATTTTTTTGGTTTAAAGTAGTATAGGAAG ATTGAAAAGTAGAAGTTCGATTTAACAAGGGTCCATTGTAGTTTAGACAC TTAACTTTAActttgattcaaaattaaattaGCTAGGGCAGAAAGATGGT ATTCCAAACTACGAGTTGCTGATTAGGTTTTCTTCATGTCGAAACAACAA TGTATTTGTACTTAAAACACTTCCTGGGTTGATCAATAATTCTTTGTTTA TTCTCAGGGAATTGGCAGAAGAAGAACTTAAAACGAACATCGCACAGTCC GAAGTTTTCGTTCTCCCAAGTGGACAAGAAATAGAGAAAGAAGATATCCT TTTCAAAATACATTTTATTGAATTGCAACAGCCATAAAAGATTTTAACTT TAAATGACACAGTTTGTAGAAACACTGATCCCAACTTAAATGACAAATGC CACCTTTATTCTCGGTTTAATGCACTTTCTTGACTGTATGATAACATCcg attttaaattttagtaaTTGTTTTTTCCTTAACTTTGATGTGCACGTATC GACCCTCCAGATTTATCAATGGTTCACCAGAGGATTAAAGACAACCTACA CGCTTTGAGTGATTTCAAAAAGAATAGACAAGAGGGCAGGTGAGATTGAG TGAAAATGTTTATTACTGTTATGATTATTGTCGTCCCTGATATGGTACAT TCTGAAAAGTTGTGGATTAgaaccaaaatttgaaatgatatgGGTGCTTA AGCAGATGCTTTACATGTGTTGAATCAGGATGTTGCTAAGCTCTCTACCC ACTGGCAGAGTAAAGTTAGCGAGATTTATTGATCTCCTATATTGTCATTG ATACAAAATTAACTtgacaatttcaattttggttttaatttcagatttca tatattttaagaaaatttgataTGATTTTTTCTCGTTAGGAGCCGTCATG AATATCTTCAAGTATTGGTCAAGGACTTGATGAAGTATTACAGTTACAAT GAATATTTCATGGAATACCTTGTCAACCTTTTTCCCGGAGGCGAGGTATA ATTTCCACTAGACTTAGAAATCACATCATATGAAGGTTTAGCCAGGCAAC AATACCTTCTTTTAAATAGCCTTTATCAGGTttagtttcaattttttgta aacgtttttttattttctccatCTCCTTTTCTATATTGTTTACAACTAGA TCTTGGAGTTCTTGGAGGCTTGCGAAGTTCGAAGGCCCATCACAATCCGA TCAAACTCTTTAAAAACCAGAAGAAGAGATTTAGCACAATCTTTGATCAA CAGAGGAGTTAATCTTGATCCCATTGGAAAATGGTCCAAAGTTGGTCTGG TTGTTTACGACTCATCTGTACCCATTGGTGCTACTCCTGAATATCTTTCT GGTCATTACATGTTGCAAGGTGCATCTTCAATGTTGCCAGTGATGGCATT AGCACCTCAAGAACATGAGAAAATTATGGATATGTGTGCAGCTCCTGGTG GAAAAACCACTTACATTGGTTAGTTACAGTTCAGTTTTTTCactttatta aaattttctctTACAACGAGAACCTCAATTTAAGATGATTTGTTGCAATG ATGGAAGCAatcattttagaaaatattgtATTGCTCCAAATCCTCCTCGT AACCATTTTGTCATGTTATTTCAGTTCCAGTTCAGTTTTTCACTTTAACC TGCTTTAACAGACCCACAATGAGAAACTCAATTTAAGATGATTTGTTGCA ATGATGGAAAAAATCCTTTTAGAGTTTTATTGTTCCAAATCCTCCTTTTA ACAAtgttttcatgttatttttttcttacagGTGCGCTGATGAAGAACAC AGGGATGCTTGTTGCAAACGATGCCAAAGAAGAACGTCTAAAATCACTCA CCGCCAATGCTCACAGGATGGGCATCAACAATCTTATTGTGTGTAATTAT GATGGTCGATCCTTTCCTAAAGTGATGGGTGGTTTCGACCGCATTTTGTT GGATGCACCTTGCAGTGGGACTGGCGTCATTTCTAAAGACGAACAAGTCA AAATAAATAAGGTATTGGAAATCTTATTGTTGGACCTACcacggaggtcc tttaaattaaccgatTCGTTCGTGTGTTGGtgtgtccgttcgtctgttac cagctttgcTCGGGATtgcttattagttttttctgattttttttttcaca gtgatgcaaaatggtgattcccAAAAAGTGACTTAGCTGGActgagccca attttcgaaaaaaagtctTTGGGCAAATTTCGGctaaaaagtgcctaaaa attgggatgtttttttttacttctctttcaTTTGCACTTAAAATATTGTA CAACAACTGTCAACATCATTTTCGATTCTCGTTTACCAGGTTTTCTTCTA TAAATTTTTTAGTCTGAGAAAGACATTATGCGGTGCTCACACATCCAAAA AGAATTGATTTTGGCGGCTATCGATTCTGTGGATGCGAAATCAAAGACTG GTGGATATGTTGTTTATTCAACTTGTTCCATTATGGTGAGAAGTGAAGTG ttttcaaatattcaaaataacaaTTTGCCGTGATGAATGAGATGACATGT GCAAAGTTTCATTATCTTTTCAGTAGTTGATACAATGCATTTAATCTTTA ACTTCTCTAAGTAAGACtttaaagatattcaattccccACCAATTGACAT TTTTAGGTTGAAGAGAATGAATGGGTGGTAGATTACGCTTTGGCTCAGCG AAATGTCAAATTGGTGCCAACCGGTATCGACTTTGGTAAAGAGGGATACA CAAAGTAAGTTCTTGGTACACTGCGAAAAAACATTTCATTAAAACCAATC ATCTCGCCTCCCAGACTCGACTCCTGCTCAAAATCATTTCTGAGCTAAAG AGGCGACAATATCCTGGCTGGTTTAAGAATATATTCTTCGCTCGATTATT CTATTATCATGTCAGCGGCTTTcccaaaatatatattttttgtatttttg tgtgTATATTGATTGCTTAGAAACTGTAGTGCTAGTCAATGTTCTGCTAG TCAATGTTCTACTTCTTGTCTTTTTTCTACTAGATACAAAGACCGTCGTT TCCATCCGTCGCTAAACTTGACAAGACGTTTTTATCCTCACACACAAAAT ATGGACGGTTTTTTcgttgccaaatttaaaaagtttgccAACATTATTCC GAAGAATCAAAAACCAGGTACACGCTTTCTCGAAGTTCACTATATTATTG TTTTATCGTTAGTATGTTTTCGAAAACTTTGAGTATGTTAGTCTCAATTG TTTtactttgttttaaaataagTTTCAACAAGTGTTATTTGAGTCCAATT AATTGTAAGAgtgatttccatttttttgtaGCAGAGGAGGAGGTAGAAGA GGTAGGAGCTGAAGAAACTTCAGAGAACGAAGATGAAACAGAAGAAACAT CAGAACAAGCAGAAGAGATGGAAAGTGAAGATGTTCCAGAGAAGAAGGAA GACActccaaaacaaaaagaagataCTCCAAAGCAAAAGAAGACGAATAA AAAGCGTAAAAACACAGATACAAAACCAAAGGAATCCACTGACGAGAAAA GCcccaaaaagaaacaaaagaaaatgccaaagaaagaaaatagtcagaat aaaacgaaaaaagaaaagactGTTGAAAAAGTTGATAACAACGAAGCTGA TGAAAATACGACAGAATCGCAAGATAAGAATGAGGAGACACAATCCAAAG AAGTTGATACACAATCAAAAGAAGTCAGTACACAATCACCAAAAACCACC AAGaaaacaaacaagaaaaagatcaacaaaaccaaaaaatcacccaataa aaagaagaaaaagccaGCAGCACAAACctaaaacattcttcatattgagc ttgtatttttatataattttatcaagaaaaatattgatttttggtgGTCC TTTGGGGTATATACACTTGACTGTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00016257TCONS_00016257Clytia hemisphaericatranscript
TCONS_00016258TCONS_00016258Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00016258-proteinTCONS_00016258-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000232supercontigsc0000232:324372..335396 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
61.03 61.95 15.63 12.6 97.71 76.51 94.19 102.32 68.98 78.79 68.75 62.47 98.92 118.35 77.43 88.96 68.28 73.28 22.64 27.71 88.54 90.09 80.16 74.15 104.16 131.57 31.9 34.53 59.58 66.42