XLOC_008844 (gene) - C. hemisphaerica

Overview
NameXLOC_008844
Unique NameXLOC_008844
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000217:285479..292792+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008844 ID=XLOC_008844|Name=XLOC_008844|organism=Clytia hemisphaerica|type=gene|length=7314bp|location=Sequence derived from alignment at sc0000217:285479..292792+ (Clytia hemisphaerica)
CGACAAACTTACCTTTCTTTTCTCGcagctttgtttttttttatcttgtc AATAAGAATTAAAAGTGTCCCGTCCTCTTTCTGATAAGAATTgtgtaccc agctggcacacaacgttgttttaacgttcatgttaacgttatttggacgt tatgaatgtcaaatggacgttgttttggcgttgtgtgccagctgggtaca cAATTCTTATCAGAAAGAGGACGGGACACTTTTAATTCTTATTgacaaga taaaaaaaaacaaagctgCGAGAAAAGAAAGGTAAGTTTGTCGaagtata cacgctttttttataagaatggtgtaaatccatttcatcatggatattct taacttttttgggaaaatcatcctaaaatattcttacaNcgtaagaatat tttaggatgattttcccaaaaatattAAGCACCCTAacatgatgaaatga atttgcaccattcttataaaaaaaagcgtgcagTAGAAAACCAATTAAAA AACAACCAGAATTCAAAAAATGTACAGTAAAAATGTACAGTAGTAGACTC CCATTattcgaataactgaaaaagTCGTTTTTCCGCCAGATTTTTAACTT AACCTTGATGAGATGGACTTTTCTGGAGAAATTGAGGCTTTGTGGTTCAG TTGAGtgtaataaacacaaataatttTTGAAGACAGAATTGAAGAAGAGT TCTAATCCCAGAAAATCCATGTTTACATTCAACGATCTCCCAACAGGAAA AATATAATAACTGATAACGGATAATTGAGGGTGGTTTAgcctaaaaaaaa tcaagttgaccgttaaagctatcaaacgtcgtttggttagatattcccgc ttgtaaatcaagttttgttcgttagcAGTTGATGCATTAGTAGGNTTACA TGGAATCAATTTGAAAAAACGTTGTTAAAAGAAAAAGTATCTAAGATGTC ATCATATACAACTTTGTTTTTGCTTATACTTTTTAACTGTGTACCCAGTT GCGAAGCAGTAACACCAGAGAGAAGGGCCCTACGATACAATGCAATGATA TTATTTTTGTTAACCTGTCTTGGTTTGTTTGGGTGGcttcgaaagaaaaa aagaagacataaACGGANcaaaaaaaatttttccggctgGCTGCATGAAA GCATTTTTCCTTCACCTGCATtctggaaacactacatttttttaattttc acctTAATACCACATTTTGACAGCATGCGtattaacttgaaatttcattt tggCAANtttcgaaagaaaaaaagaagacataaACGGAAAGCCAACcaaa agaagattaaaacaGGTACTTTTTAGACAGGgaaccgtcctgtatttttt aataatctgatgtatacagggcGGCGGGTATGATCTGTGAGGCACAAATC TGCCTCAAAAAGTTTACagtgaaaattcaaatttagcgctgtcctcactt actaaaataaaaatcaaattttggaagttgcgctttctctaagaaagtgt gaccagtaaaagaataacaaaatttgattggctatgttttcaaccgttat tagtatctgagaaattcaaactctcagcccataccatgctatatatttcg ccatcagtacatagaataagaaatcaaagcatggatctccaggctaagtG CTTTTATACACAACATATTGcgattttttagagaaaaatggtAGGAAGAG TTGGTTTCTCTGATTTTTAGTTGTCACCGGATTTTAGTCAAGTAAGACGC ACATTCTTACAAATTTTCCAACACATTTGAATGACTGACTGACTGGTTTG ATTGTTGAAAGTCACCAATTAGTCTCAAGATCTTGGGTCATTTATTAGTT TGAAATTATAGGTGCAATTTTCTGCATTATTCGACCTCAAAAAGGTATAG CGTACTTATTTGGAACACGGATGAATTACTTTTTCAAGATATGAGAATCG AAATGACGAAAGCTAAGACATCAAGTTTTACAGAGCAAAGACCGGGGACC TCAGATAGACCCTTTGAGTGCCAATGTCGTGTATATCGGACTATATAAAG CCCTCCTGTAAGCCCAGTTTGAATTAGAATTCGTCATTTTTTTTGGTCTA ATTCGTAGGAATTGGATCGagctttatggtcaagcaaaaaaaaaatcaaa agtgagtctttccagcaatattttaaaaagtctaaaaaaaatgcaaaaat ttgataaaaatccatttttttgagattttcttaaaaaaactcagaaaaaa agcccgtggcacttaaagggttaaagtgCGTCATAAACAATGTGATAGCA TTTATTGTTCTATTCATGAAAGAACAAAAAAGTCATCCAGTACTTTATTG ACTCTCTTTTCCTACTTCTCTAATATCAAAACAACGAGATTTGCTACTCT GATTCCGGCTGGGGGGGGATTCTTAGGCAAAACAGTTGACGGGTTTTtgt gagccataagggtacATATCCATACgttagtctctcaaagggtcccagaA AGAGGCCCAgaatcttcgagttagaaaacttcgagttagcgattttcgag ttaggaattttcgagttagctaaattatgacgtcactcgactctaactcg attttttatttcCAAAGAATATTTTTCGAGTTGAAATTaactcaaatttt atttttcgaaaaaactttttcgagttagctaactcgaatttctttttcac aaaaccttttttcaagtTAGCTAACtctgaatttatttttcgtttacaag ttttggatttttttagaaaaagttagcttgaaatattttttgtatggtac aatcatggtcgaaatagaatgagaattccggttattttaacgtgtttcaa gatttaaagttctggcgagaaagtcgattttgggatatctctttaactta atcgaatatttcaatttgggagagacttccaggctatattctgagcgtta ttggaatatttttgaacttttgctaggtacccttaatgaataggtaaccc caaagaattgcaaggcattagcccccctctactaacctggcctaggtgcc cttcagatttctgaGGGGGGGGGCTGATACCATGAAATTCCTAACTCAAA AATCGCAGACTCGAAGTTTTCCAACTCGAAGATTCCAGGCCTCTCCCAGA AACACTAAAATCGAAAACATCCCTCTCAAAGGGTcatgattttcaaaaag ttagaacaaattttgggaaaaatcacccaatattttgacaaaaattgctC AAAGGGtctaaaaaatgtaaaaagatttCTCATAAAGGAtcggtttttga tttttggctcggacatacccgtcacctcgcttATATATGTATTATCTTTG CAGAAAATTGCCTCACAGAAGTGAATAAAATGTAGAGGCATCCAGGGCTA ACCTTTTCATCTATCAAAAAAGAGATTAAGTTTAAGGGCGAGGTTGACCC AAACATAGAttaataaaacaaagacaacacGAGGATATATGTCCTAATAG GCGTATATCAATCGTCCTTTTGctgttttcagattttaacaCGGATTCGC CTATCCTTCAAACCGAATCACGAATCCCTCACCCCGAACCAACAACAATT CAGACTGAATCACTAGTCCTTCAAACCATTCCAACAACAAGTCAGACCGA ATCACGAATCCCTCACCCCGAACCATCTACAAGTCAGACTGAATCACCAG TCCTTCACCCCGAACCATCTACAAGTCAGACTGAATCACCAGTCCTTCAC CCCGAACCATCTACAAGTCAGACCGAATCACCAGTCCTTCAAACCATTCC AGTGAAGTTTCAGACCGAACAGACCGAATCACCAATCCTTCAAACCGAAC CATCTACAATTCAAACCGAATCAACAGTTCTCCAAACCGAACTATCTACA AGTCAGACCGAATCACCAGTCTTTCAAACCGAACGATCGACAAGTCAGAC CGAATCACCGGTCCTTCAAACCGAACCATCTACAATTCAAACCGAATCAC CAGTCCTTCAAACCGAACCATCTACAAGTCAAACCGAATCAACAGTTCTC CAAACCGAACTATCTACAAGTCAAACTGAATCACCAACCCTTCAAAACGA GCCACAGTTAAAAGAGATCAAATCAGGAAATAATAATTATTATTACCATT TATATATATTTCTCGGAGTTATCGCTGATGTTTTGCGTGAAAAATTCCAT ATCAAATTTTCTAGAGATCCCAAAACCCTCTTTAAAGAACTAGAAAGGGA ACAAGAGAAAATAAAtggatcaaaagaaaaaaagaacaaaccGTTTTTAT ATAAAGATCAATTAGACCTATTGTTCCCGACAACAGGAGAAACTGATTCG CGAACATTCGATATCACGCTATTGGCGATCCTTTTGCGTTATTTCTGTGG ATATAACATTCCAAATACAAAATTCAAAGACTGGGGAAAATTAGATGCAA AGGAAAGCGAAGAAAGTAAAATGTAGCAGTTAATCTTACTAAGACACAAA ATTATCCATTCAGCGTGCATAACTTGGAAAGACTTTCAAGAAATTATAGG AAAAGCTGAAAATCCTCTTAGAAAACTTGGGGTATCCCTTAAACAGtttg aaaagataaaaacattcGCGTTTGAAGAGATCAACAAAGAGGAAAGGGAG GAGGACAATGCACAAGCCTCTCAAAATCGAGCCTCTGAGAATCGAGCCTC TCAGAATCGAGCTTCAAAAAACCACATTTTCCCCCCTGTTACCCATTTCC ATGGACGTGATACGGAGATCGACCGAATTCATGATTCACTATCTCTACAA AACGATGGAAGGAAAATTGGAACAGTAATCCACGGGTTTGCAGGTGTAGG AAAAAGTGAATTAGCCAGAGCATATTGTAATCAATACAGCAAGAAATGGA AACATATTGTCTGGATTGATATGAAGAATGAATCAACTACCAAAACGTCT TTCCTTAAAGTCGCTCTGAAATTCGGTATAGAGCTCCTCCAAGGTGACGG AAGCCGAAAAGAAAATTGGGAAATCATCTATCATTGTATTACCTACCAAA AAAGCGCTAAAGATGGAAAAATCTTATTCATTTTCGACCATGTTAGTAAG CAATCAGACATGGAAAAAGTTTTGAATCAACAAATGAGTCCCAGGCCTAT TGTTCTTGTGACCAGCCAATGCCATCGAATAGCTTGGGACTCTAGATTCG ATTTTATTAATCTTGACGTTTTTACTGAAGAGAAGGCTAAAGAATTCTTG GGGGAACAAATAGATGATGGGGAGATAGAGAATAGAAGTGACACAATGAG TAAGATTGTGCAAAAGCTGAGCTGCCATCCACTAGGACTTTACCAAGCCA TTTGCTATATGAACAATCCTCCGATAAAGTCAATGGACGAGTACCATGAA TTGTTAACAGACAATGCAGAAAAAACAGAGCTGATgaaatatgaaacaat tttGATAGGACAAAAATCAACTTATGAATCCCTATCGACAATTTTAAAAC GTCTTCAGGCGGCTGCGAAGGAGAAAGCAATCACCCTTCTAAAGTCATTA GTGACAGACGATCGGGATCCAAATATATTGATAAAGGAATTAAATTCTGG CAAAACCGATTTTAAAAAAGCAGTTGAAGATCTCTTACATTGCTCTATTA TTGATCTGTATCCACACGATGTATCGGCCGGACAACAACAGTTTCGAATG CTGGTATTATTCAAGCACATTTTCAGTGAACTCCTTAAAAAGCAGCCCAG ATTCACAAGTTGTTCGACTGTCTCTGGTAAGATAATCATTTCCATGATCA GAATATAGAGTTGGAATATTGGAATGATAATCTTTAAATGGATGAATTTA AGGCTTCTTTTAAACctttgcaaaatttgagaaaaaatagtGTTATCTAT TCTAATAAGTCTTAGCTGTACACACCTTCTATCATTAAAGGAAAGTCGAT CTAGTCAAGTAAAGTCTGTCTCagaataatttgcagctgagacaaaaatg gctgtaacattttattttcgccattttttgagtatatttgtctattttcc taagaaattcagTGTtttgagtctgcaaagccttataatgtttttaactt gttcttaacattttggccatcgaagcctaatattcttttatagtttgttc ttataaaaaaaaacgtgtacgccACTTGCAATCAGCTGTCGTAAAGGTGA CATTAAGTCGGAAGATATTTCAAGAGTCCATGTCCTGGATTATAGGCACA ACAAAGCAAAAAATTATTCCTTATTAATTTTGCAGCTGCCGAGACAATTG AGTCAAGCGACGAAAGAAAACTGACGGACTTGAAGAAAGTGGAGAAAGAT CAGCTCCATccatgttttgaaaagagaggTGACCATTTAAAAAGCTGGAG GCATTTGATCGACGAAATATTTGCACTCGAGAATgacaaaaatgaaatca aagacGCCATCGAGATCCAACGGCTGATGGGCGGTGGCGCCGCTGGTCAA TTCCTGGTCAAATTGTACAGAGTAAAACCGAGTCTTAAGATTGGAACTCT AAGAGAATTTTGTTCTACGAAAAATCGAGGTGATATAGTTGGAATTCTAG AGACACACAAAGAAGatgatgaaatttttaaagTATTAGGCGAAAATGAT TTGACAAAACTTAGAGTAAAATTGGCACATGATGATTTTTGGATAATCGT AGCTGAGTCAATTGTTGGTTTCTGtgatggaaacaataaagaagAAGTAA GTTTGATAGTTAACCAAATCAAAGTTACTAACCAGCACATTGTCCAAACA TGTACAGAAAGTTTTTTCGATGTTTTGAGAGAAAGAAAACATGATATGAC AATAAAGCAATTAGCTGAATATTGTGGAAAACTTGGGATGGGTAACGCAG TCAAATTATTGAACAAATTTGCATGTACATAATTTTTGATATGTAATCTC TTAGAGGTTGGCTTGAGGTCTGTTTAATGACCCGGAATAGGGAAAGTTTT CGGGAAAAAAATTAGCCAAATTTGTttaaatttgggcgaaaaatcgTCCC TTATGGGTAACACGTcgtttttcacactttttaaacCTTTAGAGTGCACT TTCTCTCATCGAGGAAGCCTGAAAAACGTACCCTTGGGGCCTACACCTAC GATCATTATGTTTAGTGACATGATGGTGTacccaaaaacttaaaaatcct tttagtatcatggggtactaaaataccaaaaagtgaTATCCaggcaaaaa tttgagaattcTTTTAGTAATTTGGTACTAAAAATtagtaatttttatca tttttgaatctttt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00015810TCONS_00015810Clytia hemisphaericatranscript
TCONS_00015811TCONS_00015811Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00015810-proteinTCONS_00015810-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000217supercontigsc0000217:285479..292792 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.11 0.09 0.29 0.24 0.26 0.09 0.43 0.47 0.13 0.06 1.14 0.35 1.43 0.97 1.86 2.7 0.82 0.74 0.42 1.24 0.52 0.25 0.71 1.34 1.85 2.74 3.65 5.08 0.4 0.23