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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015811 ID=TCONS_00015811|Name=TCONS_00015811|organism=Clytia hemisphaerica|type=transcript|length=3828bp ATTTTTAACTTAACCTTGATGAGATGGACTTTTCTGGAGAAATTGAGGCT TTGTGGTTCAGTTGAGtgtaataaacacaaataatttTTGAAGACAGAAT TGAAGAAGAGTTCTAATCCCAGAAAATCCATGTTTACATTCAACGATCTC CCAACAGGAAAAATATAATAACTGATAACGGATAATTGAGGGTGGTTTAg cctaaaaaaaatcaagttgaccgttaaagctatcaaacgtcgtttggtta gatattcccgcttgtaaatcaagttttgttcgttagcAGTTGATGCATTA GTAGGNTTACATGGAATCAATTTGAAAAAACGTTGTTAAAAGAAAAAGTA TCTAAGATGTCATCATATACAACTTTGTTTTTGCTTATACTTTTTAACTG TGTACCCAGTTGCGAAGCAGTAACACCAGAGAGAAGGGCCCTACGATACA ATGCAATGATATTATTTTTGTTAACCTGTCTTGGTTTGTTTGGGTGGctt cgaaagaaaaaaagaagacataaACGGAAAGCCAACcaaaagaagattaa aacaGattttaacaCGGATTCGCCTATCCTTCAAACCGAATCACGAATCC CTCACCCCGAACCAACAACAATTCAGACTGAATCACTAGTCCTTCAAACC ATTCCAACAACAAGTCAGACCGAATCACGAATCCCTCACCCCGAACCATC TACAAGTCAGACTGAATCACCAGTCCTTCACCCCGAACCATCTACAAGTC AGACTGAATCACCAGTCCTTCACCCCGAACCATCTACAAGTCAGACCGAA TCACCAGTCCTTCAAACCATTCCAGTGAAGTTTCAGACCGAACAGACCGA ATCACCAATCCTTCAAACCGAACCATCTACAATTCAAACCGAATCAACAG TTCTCCAAACCGAACTATCTACAAGTCAGACCGAATCACCAGTCTTTCAA ACCGAACGATCGACAAGTCAGACCGAATCACCGGTCCTTCAAACCGAACC ATCTACAATTCAAACCGAATCACCAGTCCTTCAAACCGAACCATCTACAA GTCAAACCGAATCAACAGTTCTCCAAACCGAACTATCTACAAGTCAAACT GAATCACCAACCCTTCAAAACGAGCCACAGTTAAAAGAGATCAAATCAGG AAATAATAATTATTATTACCATTTATATATATTTCTCGGAGTTATCGCTG ATGTTTTGCGTGAAAAATTCCATATCAAATTTTCTAGAGATCCCAAAACC CTCTTTAAAGAACTAGAAAGGGAACAAGAGAAAATAAAtggatcaaaaga aaaaaagaacaaaccGTTTTTATATAAAGATCAATTAGACCTATTGTTCC CGACAACAGGAGAAACTGATTCGCGAACATTCGATATCACGCTATTGGCG ATCCTTTTGCGTTATTTCTGTGGATATAACATTCCAAATACAAAATTCAA AGACTGGGGAAAATTAGATGCAAAGGAAAGCGAAGAAAGTAAAATGTAGC AGTTAATCTTACTAAGACACAAAATTATCCATTCAGCGTGCATAACTTGG AAAGACTTTCAAGAAATTATAGGAAAAGCTGAAAATCCTCTTAGAAAACT TGGGGTATCCCTTAAACAGtttgaaaagataaaaacattcGCGTTTGAAG AGATCAACAAAGAGGAAAGGGAGGAGGACAATGCACAAGCCTCTCAAAAT CGAGCCTCTGAGAATCGAGCCTCTCAGAATCGAGCTTCAAAAAACCACAT TTTCCCCCCTGTTACCCATTTCCATGGACGTGATACGGAGATCGACCGAA TTCATGATTCACTATCTCTACAAAACGATGGAAGGAAAATTGGAACAGTA ATCCACGGGTTTGCAGGTGTAGGAAAAAGTGAATTAGCCAGAGCATATTG TAATCAATACAGCAAGAAATGGAAACATATTGTCTGGATTGATATGAAGA ATGAATCAACTACCAAAACGTCTTTCCTTAAAGTCGCTCTGAAATTCGGT ATAGAGCTCCTCCAAGGTGACGGAAGCCGAAAAGAAAATTGGGAAATCAT CTATCATTGTATTACCTACCAAAAAAGCGCTAAAGATGGAAAAATCTTAT TCATTTTCGACCATGTTAGTAAGCAATCAGACATGGAAAAAGTTTTGAAT CAACAAATGAGTCCCAGGCCTATTGTTCTTGTGACCAGCCAATGCCATCG AATAGCTTGGGACTCTAGATTCGATTTTATTAATCTTGACGTTTTTACTG AAGAGAAGGCTAAAGAATTCTTGGGGGAACAAATAGATGATGGGGAGATA GAGAATAGAAGTGACACAATGAGTAAGATTGTGCAAAAGCTGAGCTGCCA TCCACTAGGACTTTACCAAGCCATTTGCTATATGAACAATCCTCCGATAA AGTCAATGGACGAGTACCATGAATTGTTAACAGACAATGCAGAAAAAACA GAGCTGATgaaatatgaaacaattttGATAGGACAAAAATCAACTTATGA ATCCCTATCGACAATTTTAAAACGTCTTCAGGCGGCTGCGAAGGAGAAAG CAATCACCCTTCTAAAGTCATTAGTGACAGACGATCGGGATCCAAATATA TTGATAAAGGAATTAAATTCTGGCAAAACCGATTTTAAAAAAGCAGTTGA AGATCTCTTACATTGCTCTATTATTGATCTGTATCCACACGATGTATCGG CCGGACAACAACAGTTTCGAATGCTGGTATTATTCAAGCACATTTTCAGT GAACTCCTTAAAAAGCAGCCCAGATTCACAAGTTGTTCGACTGTCTCTGC TGCCGAGACAATTGAGTCAAGCGACGAAAGAAAACTGACGGACTTGAAGA AAGTGGAGAAAGATCAGCTCCATccatgttttgaaaagagaggTGACCAT TTAAAAAGCTGGAGGCATTTGATCGACGAAATATTTGCACTCGAGAATga caaaaatgaaatcaaagacGCCATCGAGATCCAACGGCTGATGGGCGGTG GCGCCGCTGGTCAATTCCTGGTCAAATTGTACAGAGTAAAACCGAGTCTT AAGATTGGAACTCTAAGAGAATTTTGTTCTACGAAAAATCGAGGTGATAT AGTTGGAATTCTAGAGACACACAAAGAAGatgatgaaatttttaaagTAT TAGGCGAAAATGATTTGACAAAACTTAGAGTAAAATTGGCACATGATGAT TTTTGGATAATCGTAGCTGAGTCAATTGTTGGTTTCTGtgatggaaacaa taaagaagAAGTAAGTTTGATAGTTAACCAAATCAAAGTTACTAACCAGC ACATTGTCCAAACATGTACAGAAAGTTTTTTCGATGTTTTGAGAGAAAGA AAACATGATATGACAATAAAGCAATTAGCTGAATATTGTGGAAAACTTGG GATGGGTAACGCAGTCAAATTATTGAACAAATTTGCATGTACATAATTTT TGATATGTAATCTCTTAGAGGTTGGCTTGAGGTCTGTTTAATGACCCGGA ATAGGGAAAGTTTTCGGGAAAAAAATTAGCCAAATTTGTttaaatttggg cgaaaaatcgTCCCTTATGGGTAACACGTcgtttttcacactttttaaac CTTTAGAGTGCACTTTCTCTCATCGAGGAAGCCTGAAAAACGTACCCTTG GGGCCTACACCTACGATCATTATGTTTAGTGACATGATGGTGTacccaaa aacttaaaaatccttttagtatcatggggtactaaaataccaaaaagtga TATCCaggcaaaaatttgagaattcTTTTAGTAATTTGGTACTAAAAATt agtaatttttatcatttttgaatctttt Run BLAST on NCBI transcript from alignment at sc0000217:286068..292792+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015811 ID=TCONS_00015811|Name=TCONS_00015811|organism=Clytia hemisphaerica|type=transcript|length=6725bp|location=Sequence derived from alignment at sc0000217:286068..292792+ (Clytia hemisphaerica) ATTTTTAACTTAACCTTGATGAGATGGACTTTTCTGGAGAAATTGAGGCT
TTGTGGTTCAGTTGAGtgtaataaacacaaataatttTTGAAGACAGAAT
TGAAGAAGAGTTCTAATCCCAGAAAATCCATGTTTACATTCAACGATCTC
CCAACAGGAAAAATATAATAACTGATAACGGATAATTGAGGGTGGTTTAg
cctaaaaaaaatcaagttgaccgttaaagctatcaaacgtcgtttggtta
gatattcccgcttgtaaatcaagttttgttcgttagcAGTTGATGCATTA
GTAGGNTTACATGGAATCAATTTGAAAAAACGTTGTTAAAAGAAAAAGTA
TCTAAGATGTCATCATATACAACTTTGTTTTTGCTTATACTTTTTAACTG
TGTACCCAGTTGCGAAGCAGTAACACCAGAGAGAAGGGCCCTACGATACA
ATGCAATGATATTATTTTTGTTAACCTGTCTTGGTTTGTTTGGGTGGctt
cgaaagaaaaaaagaagacataaACGGANcaaaaaaaatttttccggctg
GCTGCATGAAAGCATTTTTCCTTCACCTGCATtctggaaacactacattt
ttttaattttcacctTAATACCACATTTTGACAGCATGCGtattaacttg
aaatttcattttggCAANtttcgaaagaaaaaaagaagacataaACGGAA
AGCCAACcaaaagaagattaaaacaGGTACTTTTTAGACAGGgaaccgtc
ctgtattttttaataatctgatgtatacagggcGGCGGGTATGATCTGTG
AGGCACAAATCTGCCTCAAAAAGTTTACagtgaaaattcaaatttagcgc
tgtcctcacttactaaaataaaaatcaaattttggaagttgcgctttctc
taagaaagtgtgaccagtaaaagaataacaaaatttgattggctatgttt
tcaaccgttattagtatctgagaaattcaaactctcagcccataccatgc
tatatatttcgccatcagtacatagaataagaaatcaaagcatggatctc
caggctaagtGCTTTTATACACAACATATTGcgattttttagagaaaaat
ggtAGGAAGAGTTGGTTTCTCTGATTTTTAGTTGTCACCGGATTTTAGTC
AAGTAAGACGCACATTCTTACAAATTTTCCAACACATTTGAATGACTGAC
TGACTGGTTTGATTGTTGAAAGTCACCAATTAGTCTCAAGATCTTGGGTC
ATTTATTAGTTTGAAATTATAGGTGCAATTTTCTGCATTATTCGACCTCA
AAAAGGTATAGCGTACTTATTTGGAACACGGATGAATTACTTTTTCAAGA
TATGAGAATCGAAATGACGAAAGCTAAGACATCAAGTTTTACAGAGCAAA
GACCGGGGACCTCAGATAGACCCTTTGAGTGCCAATGTCGTGTATATCGG
ACTATATAAAGCCCTCCTGTAAGCCCAGTTTGAATTAGAATTCGTCATTT
TTTTTGGTCTAATTCGTAGGAATTGGATCGagctttatggtcaagcaaaa
aaaaaatcaaaagtgagtctttccagcaatattttaaaaagtctaaaaaa
aatgcaaaaatttgataaaaatccatttttttgagattttcttaaaaaaa
ctcagaaaaaaagcccgtggcacttaaagggttaaagtgCGTCATAAACA
ATGTGATAGCATTTATTGTTCTATTCATGAAAGAACAAAAAAGTCATCCA
GTACTTTATTGACTCTCTTTTCCTACTTCTCTAATATCAAAACAACGAGA
TTTGCTACTCTGATTCCGGCTGGGGGGGGATTCTTAGGCAAAACAGTTGA
CGGGTTTTtgtgagccataagggtacATATCCATACgttagtctctcaaa
gggtcccagaAAGAGGCCCAgaatcttcgagttagaaaacttcgagttag
cgattttcgagttaggaattttcgagttagctaaattatgacgtcactcg
actctaactcgattttttatttcCAAAGAATATTTTTCGAGTTGAAATTa
actcaaattttatttttcgaaaaaactttttcgagttagctaactcgaat
ttctttttcacaaaaccttttttcaagtTAGCTAACtctgaatttatttt
tcgtttacaagttttggatttttttagaaaaagttagcttgaaatatttt
ttgtatggtacaatcatggtcgaaatagaatgagaattccggttatttta
acgtgtttcaagatttaaagttctggcgagaaagtcgattttgggatatc
tctttaacttaatcgaatatttcaatttgggagagacttccaggctatat
tctgagcgttattggaatatttttgaacttttgctaggtacccttaatga
ataggtaaccccaaagaattgcaaggcattagcccccctctactaacctg
gcctaggtgcccttcagatttctgaGGGGGGGGGCTGATACCATGAAATT
CCTAACTCAAAAATCGCAGACTCGAAGTTTTCCAACTCGAAGATTCCAGG
CCTCTCCCAGAAACACTAAAATCGAAAACATCCCTCTCAAAGGGTcatga
ttttcaaaaagttagaacaaattttgggaaaaatcacccaatattttgac
aaaaattgctCAAAGGGtctaaaaaatgtaaaaagatttCTCATAAAGGA
tcggtttttgatttttggctcggacatacccgtcacctcgcttATATATG
TATTATCTTTGCAGAAAATTGCCTCACAGAAGTGAATAAAATGTAGAGGC
ATCCAGGGCTAACCTTTTCATCTATCAAAAAAGAGATTAAGTTTAAGGGC
GAGGTTGACCCAAACATAGAttaataaaacaaagacaacacGAGGATATA
TGTCCTAATAGGCGTATATCAATCGTCCTTTTGctgttttcagattttaa
caCGGATTCGCCTATCCTTCAAACCGAATCACGAATCCCTCACCCCGAAC
CAACAACAATTCAGACTGAATCACTAGTCCTTCAAACCATTCCAACAACA
AGTCAGACCGAATCACGAATCCCTCACCCCGAACCATCTACAAGTCAGAC
TGAATCACCAGTCCTTCACCCCGAACCATCTACAAGTCAGACTGAATCAC
CAGTCCTTCACCCCGAACCATCTACAAGTCAGACCGAATCACCAGTCCTT
CAAACCATTCCAGTGAAGTTTCAGACCGAACAGACCGAATCACCAATCCT
TCAAACCGAACCATCTACAATTCAAACCGAATCAACAGTTCTCCAAACCG
AACTATCTACAAGTCAGACCGAATCACCAGTCTTTCAAACCGAACGATCG
ACAAGTCAGACCGAATCACCGGTCCTTCAAACCGAACCATCTACAATTCA
AACCGAATCACCAGTCCTTCAAACCGAACCATCTACAAGTCAAACCGAAT
CAACAGTTCTCCAAACCGAACTATCTACAAGTCAAACTGAATCACCAACC
CTTCAAAACGAGCCACAGTTAAAAGAGATCAAATCAGGAAATAATAATTA
TTATTACCATTTATATATATTTCTCGGAGTTATCGCTGATGTTTTGCGTG
AAAAATTCCATATCAAATTTTCTAGAGATCCCAAAACCCTCTTTAAAGAA
CTAGAAAGGGAACAAGAGAAAATAAAtggatcaaaagaaaaaaagaacaa
accGTTTTTATATAAAGATCAATTAGACCTATTGTTCCCGACAACAGGAG
AAACTGATTCGCGAACATTCGATATCACGCTATTGGCGATCCTTTTGCGT
TATTTCTGTGGATATAACATTCCAAATACAAAATTCAAAGACTGGGGAAA
ATTAGATGCAAAGGAAAGCGAAGAAAGTAAAATGTAGCAGTTAATCTTAC
TAAGACACAAAATTATCCATTCAGCGTGCATAACTTGGAAAGACTTTCAA
GAAATTATAGGAAAAGCTGAAAATCCTCTTAGAAAACTTGGGGTATCCCT
TAAACAGtttgaaaagataaaaacattcGCGTTTGAAGAGATCAACAAAG
AGGAAAGGGAGGAGGACAATGCACAAGCCTCTCAAAATCGAGCCTCTGAG
AATCGAGCCTCTCAGAATCGAGCTTCAAAAAACCACATTTTCCCCCCTGT
TACCCATTTCCATGGACGTGATACGGAGATCGACCGAATTCATGATTCAC
TATCTCTACAAAACGATGGAAGGAAAATTGGAACAGTAATCCACGGGTTT
GCAGGTGTAGGAAAAAGTGAATTAGCCAGAGCATATTGTAATCAATACAG
CAAGAAATGGAAACATATTGTCTGGATTGATATGAAGAATGAATCAACTA
CCAAAACGTCTTTCCTTAAAGTCGCTCTGAAATTCGGTATAGAGCTCCTC
CAAGGTGACGGAAGCCGAAAAGAAAATTGGGAAATCATCTATCATTGTAT
TACCTACCAAAAAAGCGCTAAAGATGGAAAAATCTTATTCATTTTCGACC
ATGTTAGTAAGCAATCAGACATGGAAAAAGTTTTGAATCAACAAATGAGT
CCCAGGCCTATTGTTCTTGTGACCAGCCAATGCCATCGAATAGCTTGGGA
CTCTAGATTCGATTTTATTAATCTTGACGTTTTTACTGAAGAGAAGGCTA
AAGAATTCTTGGGGGAACAAATAGATGATGGGGAGATAGAGAATAGAAGT
GACACAATGAGTAAGATTGTGCAAAAGCTGAGCTGCCATCCACTAGGACT
TTACCAAGCCATTTGCTATATGAACAATCCTCCGATAAAGTCAATGGACG
AGTACCATGAATTGTTAACAGACAATGCAGAAAAAACAGAGCTGATgaaa
tatgaaacaattttGATAGGACAAAAATCAACTTATGAATCCCTATCGAC
AATTTTAAAACGTCTTCAGGCGGCTGCGAAGGAGAAAGCAATCACCCTTC
TAAAGTCATTAGTGACAGACGATCGGGATCCAAATATATTGATAAAGGAA
TTAAATTCTGGCAAAACCGATTTTAAAAAAGCAGTTGAAGATCTCTTACA
TTGCTCTATTATTGATCTGTATCCACACGATGTATCGGCCGGACAACAAC
AGTTTCGAATGCTGGTATTATTCAAGCACATTTTCAGTGAACTCCTTAAA
AAGCAGCCCAGATTCACAAGTTGTTCGACTGTCTCTGGTAAGATAATCAT
TTCCATGATCAGAATATAGAGTTGGAATATTGGAATGATAATCTTTAAAT
GGATGAATTTAAGGCTTCTTTTAAACctttgcaaaatttgagaaaaaata
gtGTTATCTATTCTAATAAGTCTTAGCTGTACACACCTTCTATCATTAAA
GGAAAGTCGATCTAGTCAAGTAAAGTCTGTCTCagaataatttgcagctg
agacaaaaatggctgtaacattttattttcgccattttttgagtatattt
gtctattttcctaagaaattcagTGTtttgagtctgcaaagccttataat
gtttttaacttgttcttaacattttggccatcgaagcctaatattctttt
atagtttgttcttataaaaaaaaacgtgtacgccACTTGCAATCAGCTGT
CGTAAAGGTGACATTAAGTCGGAAGATATTTCAAGAGTCCATGTCCTGGA
TTATAGGCACAACAAAGCAAAAAATTATTCCTTATTAATTTTGCAGCTGC
CGAGACAATTGAGTCAAGCGACGAAAGAAAACTGACGGACTTGAAGAAAG
TGGAGAAAGATCAGCTCCATccatgttttgaaaagagaggTGACCATTTA
AAAAGCTGGAGGCATTTGATCGACGAAATATTTGCACTCGAGAATgacaa
aaatgaaatcaaagacGCCATCGAGATCCAACGGCTGATGGGCGGTGGCG
CCGCTGGTCAATTCCTGGTCAAATTGTACAGAGTAAAACCGAGTCTTAAG
ATTGGAACTCTAAGAGAATTTTGTTCTACGAAAAATCGAGGTGATATAGT
TGGAATTCTAGAGACACACAAAGAAGatgatgaaatttttaaagTATTAG
GCGAAAATGATTTGACAAAACTTAGAGTAAAATTGGCACATGATGATTTT
TGGATAATCGTAGCTGAGTCAATTGTTGGTTTCTGtgatggaaacaataa
agaagAAGTAAGTTTGATAGTTAACCAAATCAAAGTTACTAACCAGCACA
TTGTCCAAACATGTACAGAAAGTTTTTTCGATGTTTTGAGAGAAAGAAAA
CATGATATGACAATAAAGCAATTAGCTGAATATTGTGGAAAACTTGGGAT
GGGTAACGCAGTCAAATTATTGAACAAATTTGCATGTACATAATTTTTGA
TATGTAATCTCTTAGAGGTTGGCTTGAGGTCTGTTTAATGACCCGGAATA
GGGAAAGTTTTCGGGAAAAAAATTAGCCAAATTTGTttaaatttgggcga
aaaatcgTCCCTTATGGGTAACACGTcgtttttcacactttttaaacCTT
TAGAGTGCACTTTCTCTCATCGAGGAAGCCTGAAAAACGTACCCTTGGGG
CCTACACCTACGATCATTATGTTTAGTGACATGATGGTGTacccaaaaac
ttaaaaatccttttagtatcatggggtactaaaataccaaaaagtgaTAT
CCaggcaaaaatttgagaattcTTTTAGTAATTTGGTACTAAAAATtagt
aatttttatcatttttgaatctttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
| TCONS_00015811-exon-sc0000217-1491911889:286068..286586 | TCONS_00015811-exon-sc0000217-1491911889:286068..286586 | Clytia hemisphaerica | exon |
| TCONS_00015811-exon-sc0000217-1510915933:286068..286586 | TCONS_00015811-exon-sc0000217-1510915933:286068..286586 | Clytia hemisphaerica | exon |
| TCONS_00015811-exon-sc0000217-1575043694:286068..286586 | TCONS_00015811-exon-sc0000217-1575043694:286068..286586 | Clytia hemisphaerica | exon |
| TCONS_00015811-exon-sc0000217-1491911889:286758..286793 | TCONS_00015811-exon-sc0000217-1491911889:286758..286793 | Clytia hemisphaerica | exon |
| TCONS_00015811-exon-sc0000217-1510915933:286758..286793 | TCONS_00015811-exon-sc0000217-1510915933:286758..286793 | Clytia hemisphaerica | exon |
| TCONS_00015811-exon-sc0000217-1575043694:286758..286793 | TCONS_00015811-exon-sc0000217-1575043694:286758..286793 | Clytia hemisphaerica | exon |
| TCONS_00015811-exon-sc0000217-1491911889:289011..291254 | TCONS_00015811-exon-sc0000217-1491911889:289011..291254 | Clytia hemisphaerica | exon |
| TCONS_00015811-exon-sc0000217-1510915933:289011..291254 | TCONS_00015811-exon-sc0000217-1510915933:289011..291254 | Clytia hemisphaerica | exon |
| TCONS_00015811-exon-sc0000217-1575043694:289011..291254 | TCONS_00015811-exon-sc0000217-1575043694:289011..291254 | Clytia hemisphaerica | exon |
| TCONS_00015811-exon-sc0000217-1491911889:291764..292792 | TCONS_00015811-exon-sc0000217-1491911889:291764..292792 | Clytia hemisphaerica | exon |
| TCONS_00015811-exon-sc0000217-1510915933:291764..292792 | TCONS_00015811-exon-sc0000217-1510915933:291764..292792 | Clytia hemisphaerica | exon |
| TCONS_00015811-exon-sc0000217-1575043694:291764..292792 | TCONS_00015811-exon-sc0000217-1575043694:291764..292792 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000217 | supercontig | sc0000217:286068..292792 + |
Blast
The following BLAST results are available for this feature:
|