TCONS_00015810 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00015810
Unique Name	TCONS_00015810
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3700

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000217:285479..292792+
coding sequence from alignment at sc0000217:285479..292792+

transcript sequence

>TCONS_00015810 ID=TCONS_00015810|Name=TCONS_00015810|organism=Clytia hemisphaerica|type=transcript|length=3700bp
CGACAAACTTACCTTTCTTTTCTCGcagctttgtttttttttatcttgtc
AATAAGAATTAAAAGTGTCCCGTCCTCTTTCTGATAAGAATTgtgtaccc
agctggcacacaacgttgttttaacgttcatgttaacgttatttggacgt
tatgaatgtcaaatggacgttgttttggcgttgtgtgccagctgggtaca
cAATTCTTATCAGAAAGAGGACGGGACACTTTTAATTCTTATTgacaaga
taaaaaaaaacaaagctgCGAGAAAAGAAAGTTGCGAAGCAGTAACACCA
GAGAGAAGGGCCCTACGATACAATGCAATGATATTATTTTTGTTAACCTG
TCTTGGTTTGTTTGGGTGGcttcgaaagaaaaaaagaagacataaACGGA
AAGCCAACcaaaagaagattaaaacaGattttaacaCGGATTCGCCTATC
CTTCAAACCGAATCACGAATCCCTCACCCCGAACCAACAACAATTCAGAC
TGAATCACTAGTCCTTCAAACCATTCCAACAACAAGTCAGACCGAATCAC
GAATCCCTCACCCCGAACCATCTACAAGTCAGACTGAATCACCAGTCCTT
CACCCCGAACCATCTACAAGTCAGACTGAATCACCAGTCCTTCACCCCGA
ACCATCTACAAGTCAGACCGAATCACCAGTCCTTCAAACCATTCCAGTGA
AGTTTCAGACCGAACAGACCGAATCACCAATCCTTCAAACCGAACCATCT
ACAATTCAAACCGAATCAACAGTTCTCCAAACCGAACTATCTACAAGTCA
GACCGAATCACCAGTCTTTCAAACCGAACGATCGACAAGTCAGACCGAAT
CACCGGTCCTTCAAACCGAACCATCTACAATTCAAACCGAATCACCAGTC
CTTCAAACCGAACCATCTACAAGTCAAACCGAATCAACAGTTCTCCAAAC
CGAACTATCTACAAGTCAAACTGAATCACCAACCCTTCAAAACGAGCCAC
AGTTAAAAGAGATCAAATCAGGAAATAATAATTATTATTACCATTTATAT
ATATTTCTCGGAGTTATCGCTGATGTTTTGCGTGAAAAATTCCATATCAA
ATTTTCTAGAGATCCCAAAACCCTCTTTAAAGAACTAGAAAGGGAACAAG
AGAAAATAAAtggatcaaaagaaaaaaagaacaaaccGTTTTTATATAAA
GATCAATTAGACCTATTGTTCCCGACAACAGGAGAAACTGATTCGCGAAC
ATTCGATATCACGCTATTGGCGATCCTTTTGCGTTATTTCTGTGGATATA
ACATTCCAAATACAAAATTCAAAGACTGGGGAAAATTAGATGCAAAGGAA
AGCGAAGAAAGTAAAATGTAGCAGTTAATCTTACTAAGACACAAAATTAT
CCATTCAGCGTGCATAACTTGGAAAGACTTTCAAGAAATTATAGGAAAAG
CTGAAAATCCTCTTAGAAAACTTGGGGTATCCCTTAAACAGtttgaaaag
ataaaaacattcGCGTTTGAAGAGATCAACAAAGAGGAAAGGGAGGAGGA
CAATGCACAAGCCTCTCAAAATCGAGCCTCTGAGAATCGAGCCTCTCAGA
ATCGAGCTTCAAAAAACCACATTTTCCCCCCTGTTACCCATTTCCATGGA
CGTGATACGGAGATCGACCGAATTCATGATTCACTATCTCTACAAAACGA
TGGAAGGAAAATTGGAACAGTAATCCACGGGTTTGCAGGTGTAGGAAAAA
GTGAATTAGCCAGAGCATATTGTAATCAATACAGCAAGAAATGGAAACAT
ATTGTCTGGATTGATATGAAGAATGAATCAACTACCAAAACGTCTTTCCT
TAAAGTCGCTCTGAAATTCGGTATAGAGCTCCTCCAAGGTGACGGAAGCC
GAAAAGAAAATTGGGAAATCATCTATCATTGTATTACCTACCAAAAAAGC
GCTAAAGATGGAAAAATCTTATTCATTTTCGACCATGTTAGTAAGCAATC
AGACATGGAAAAAGTTTTGAATCAACAAATGAGTCCCAGGCCTATTGTTC
TTGTGACCAGCCAATGCCATCGAATAGCTTGGGACTCTAGATTCGATTTT
ATTAATCTTGACGTTTTTACTGAAGAGAAGGCTAAAGAATTCTTGGGGGA
ACAAATAGATGATGGGGAGATAGAGAATAGAAGTGACACAATGAGTAAGA
TTGTGCAAAAGCTGAGCTGCCATCCACTAGGACTTTACCAAGCCATTTGC
TATATGAACAATCCTCCGATAAAGTCAATGGACGAGTACCATGAATTGTT
AACAGACAATGCAGAAAAAACAGAGCTGATgaaatatgaaacaattttGA
TAGGACAAAAATCAACTTATGAATCCCTATCGACAATTTTAAAACGTCTT
CAGGCGGCTGCGAAGGAGAAAGCAATCACCCTTCTAAAGTCATTAGTGAC
AGACGATCGGGATCCAAATATATTGATAAAGGAATTAAATTCTGGCAAAA
CCGATTTTAAAAAAGCAGTTGAAGATCTCTTACATTGCTCTATTATTGAT
CTGTATCCACACGATGTATCGGCCGGACAACAACAGTTTCGAATGCTGGT
ATTATTCAAGCACATTTTCAGTGAACTCCTTAAAAAGCAGCCCAGATTCA
CAAGTTGTTCGACTGTCTCTGCTGCCGAGACAATTGAGTCAAGCGACGAA
AGAAAACTGACGGACTTGAAGAAAGTGGAGAAAGATCAGCTCCATccatg
ttttgaaaagagaggTGACCATTTAAAAAGCTGGAGGCATTTGATCGACG
AAATATTTGCACTCGAGAATgacaaaaatgaaatcaaagacGCCATCGAG
ATCCAACGGCTGATGGGCGGTGGCGCCGCTGGTCAATTCCTGGTCAAATT
GTACAGAGTAAAACCGAGTCTTAAGATTGGAACTCTAAGAGAATTTTGTT
CTACGAAAAATCGAGGTGATATAGTTGGAATTCTAGAGACACACAAAGAA
GatgatgaaatttttaaagTATTAGGCGAAAATGATTTGACAAAACTTAG
AGTAAAATTGGCACATGATGATTTTTGGATAATCGTAGCTGAGTCAATTG
TTGGTTTCTGtgatggaaacaataaagaagAAGTAAGTTTGATAGTTAAC
CAAATCAAAGTTACTAACCAGCACATTGTCCAAACATGTACAGAAAGTTT
TTTCGATGTTTTGAGAGAAAGAAAACATGATATGACAATAAAGCAATTAG
CTGAATATTGTGGAAAACTTGGGATGGGTAACGCAGTCAAATTATTGAAC
AAATTTGCATGTACATAATTTTTGATATGTAATCTCTTAGAGGTTGGCTT
GAGGTCTGTTTAATGACCCGGAATAGGGAAAGTTTTCGGGAAAAAAATTA
GCCAAATTTGTttaaatttgggcgaaaaatcgTCCCTTATGGGTAACACG
TcgtttttcacactttttaaacCTTTAGAGTGCACTTTCTCTCATCGAGG
AAGCCTGAAAAACGTACCCTTGGGGCCTACACCTACGATCATTATGTTTA
GTGACATGATGGTGTacccaaaaacttaaaaatccttttagtatcatggg
gtactaaaataccaaaaagtgaTATCCaggcaaaaatttgagaattcTTT
TAGTAATTTGGTACTAAAAATtagtaatttttatcatttttgaatctttt

Run BLAST on NCBI

protein sequence of TCONS_00015810-protein

>TCONS_00015810-protein ID=TCONS_00015810-protein|Name=TCONS_00015810-protein|organism=Clytia hemisphaerica|type=polypeptide|length=500bp
MKNESTTKTSFLKVALKFGIELLQGDGSRKENWEIIYHCITYQKSAKDGK
ILFIFDHVSKQSDMEKVLNQQMSPRPIVLVTSQCHRIAWDSRFDFINLDV
FTEEKAKEFLGEQIDDGEIENRSDTMSKIVQKLSCHPLGLYQAICYMNNP
PIKSMDEYHELLTDNAEKTELMKYETILIGQKSTYESLSTILKRLQAAAK
EKAITLLKSLVTDDRDPNILIKELNSGKTDFKKAVEDLLHCSIIDLYPHD
VSAGQQQFRMLVLFKHIFSELLKKQPRFTSCSTVSAAETIESSDERKLTD
LKKVEKDQLHPCFEKRGDHLKSWRHLIDEIFALENDKNEIKDAIEIQRLM
GGGAAGQFLVKLYRVKPSLKIGTLREFCSTKNRGDIVGILETHKEDDEIF
KVLGENDLTKLRVKLAHDDFWIIVAESIVGFCDGNNKEEVSLIVNQIKVT
NQHIVQTCTESFFDVLRERKHDMTIKQLAEYCGKLGMGNAVKLLNKFACT

Run BLAST on NCBI

transcript from alignment at sc0000217:285479..292792+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00015810 ID=TCONS_00015810|Name=TCONS_00015810|organism=Clytia hemisphaerica|type=transcript|length=7314bp|location=Sequence derived from alignment at sc0000217:285479..292792+ (Clytia hemisphaerica)
CGACAAACTTACCTTTCTTTTCTCGcagctttgtttttttttatcttgtc
AATAAGAATTAAAAGTGTCCCGTCCTCTTTCTGATAAGAATTgtgtaccc
agctggcacacaacgttgttttaacgttcatgttaacgttatttggacgt
tatgaatgtcaaatggacgttgttttggcgttgtgtgccagctgggtaca
cAATTCTTATCAGAAAGAGGACGGGACACTTTTAATTCTTATTgacaaga
taaaaaaaaacaaagctgCGAGAAAAGAAAGGTAAGTTTGTCGaagtata
cacgctttttttataagaatggtgtaaatccatttcatcatggatattct
taacttttttgggaaaatcatcctaaaatattcttacaNcgtaagaatat
tttaggatgattttcccaaaaatattAAGCACCCTAacatgatgaaatga
atttgcaccattcttataaaaaaaagcgtgcagTAGAAAACCAATTAAAA
AACAACCAGAATTCAAAAAATGTACAGTAAAAATGTACAGTAGTAGACTC
CCATTattcgaataactgaaaaagTCGTTTTTCCGCCAGATTTTTAACTT
AACCTTGATGAGATGGACTTTTCTGGAGAAATTGAGGCTTTGTGGTTCAG
TTGAGtgtaataaacacaaataatttTTGAAGACAGAATTGAAGAAGAGT
TCTAATCCCAGAAAATCCATGTTTACATTCAACGATCTCCCAACAGGAAA
AATATAATAACTGATAACGGATAATTGAGGGTGGTTTAgcctaaaaaaaa
tcaagttgaccgttaaagctatcaaacgtcgtttggttagatattcccgc
ttgtaaatcaagttttgttcgttagcAGTTGATGCATTAGTAGGNTTACA
TGGAATCAATTTGAAAAAACGTTGTTAAAAGAAAAAGTATCTAAGATGTC
ATCATATACAACTTTGTTTTTGCTTATACTTTTTAACTGTGTACCCAGTT
GCGAAGCAGTAACACCAGAGAGAAGGGCCCTACGATACAATGCAATGATA
TTATTTTTGTTAACCTGTCTTGGTTTGTTTGGGTGGcttcgaaagaaaaa
aagaagacataaACGGANcaaaaaaaatttttccggctgGCTGCATGAAA
GCATTTTTCCTTCACCTGCATtctggaaacactacatttttttaattttc
acctTAATACCACATTTTGACAGCATGCGtattaacttgaaatttcattt
tggCAANtttcgaaagaaaaaaagaagacataaACGGAAAGCCAACcaaa
agaagattaaaacaGGTACTTTTTAGACAGGgaaccgtcctgtatttttt
aataatctgatgtatacagggcGGCGGGTATGATCTGTGAGGCACAAATC
TGCCTCAAAAAGTTTACagtgaaaattcaaatttagcgctgtcctcactt
actaaaataaaaatcaaattttggaagttgcgctttctctaagaaagtgt
gaccagtaaaagaataacaaaatttgattggctatgttttcaaccgttat
tagtatctgagaaattcaaactctcagcccataccatgctatatatttcg
ccatcagtacatagaataagaaatcaaagcatggatctccaggctaagtG
CTTTTATACACAACATATTGcgattttttagagaaaaatggtAGGAAGAG
TTGGTTTCTCTGATTTTTAGTTGTCACCGGATTTTAGTCAAGTAAGACGC
ACATTCTTACAAATTTTCCAACACATTTGAATGACTGACTGACTGGTTTG
ATTGTTGAAAGTCACCAATTAGTCTCAAGATCTTGGGTCATTTATTAGTT
TGAAATTATAGGTGCAATTTTCTGCATTATTCGACCTCAAAAAGGTATAG
CGTACTTATTTGGAACACGGATGAATTACTTTTTCAAGATATGAGAATCG
AAATGACGAAAGCTAAGACATCAAGTTTTACAGAGCAAAGACCGGGGACC
TCAGATAGACCCTTTGAGTGCCAATGTCGTGTATATCGGACTATATAAAG
CCCTCCTGTAAGCCCAGTTTGAATTAGAATTCGTCATTTTTTTTGGTCTA
ATTCGTAGGAATTGGATCGagctttatggtcaagcaaaaaaaaaatcaaa
agtgagtctttccagcaatattttaaaaagtctaaaaaaaatgcaaaaat
ttgataaaaatccatttttttgagattttcttaaaaaaactcagaaaaaa
agcccgtggcacttaaagggttaaagtgCGTCATAAACAATGTGATAGCA
TTTATTGTTCTATTCATGAAAGAACAAAAAAGTCATCCAGTACTTTATTG
ACTCTCTTTTCCTACTTCTCTAATATCAAAACAACGAGATTTGCTACTCT
GATTCCGGCTGGGGGGGGATTCTTAGGCAAAACAGTTGACGGGTTTTtgt
gagccataagggtacATATCCATACgttagtctctcaaagggtcccagaA
AGAGGCCCAgaatcttcgagttagaaaacttcgagttagcgattttcgag
ttaggaattttcgagttagctaaattatgacgtcactcgactctaactcg
attttttatttcCAAAGAATATTTTTCGAGTTGAAATTaactcaaatttt
atttttcgaaaaaactttttcgagttagctaactcgaatttctttttcac
aaaaccttttttcaagtTAGCTAACtctgaatttatttttcgtttacaag
ttttggatttttttagaaaaagttagcttgaaatattttttgtatggtac
aatcatggtcgaaatagaatgagaattccggttattttaacgtgtttcaa
gatttaaagttctggcgagaaagtcgattttgggatatctctttaactta
atcgaatatttcaatttgggagagacttccaggctatattctgagcgtta
ttggaatatttttgaacttttgctaggtacccttaatgaataggtaaccc
caaagaattgcaaggcattagcccccctctactaacctggcctaggtgcc
cttcagatttctgaGGGGGGGGGCTGATACCATGAAATTCCTAACTCAAA
AATCGCAGACTCGAAGTTTTCCAACTCGAAGATTCCAGGCCTCTCCCAGA
AACACTAAAATCGAAAACATCCCTCTCAAAGGGTcatgattttcaaaaag
ttagaacaaattttgggaaaaatcacccaatattttgacaaaaattgctC
AAAGGGtctaaaaaatgtaaaaagatttCTCATAAAGGAtcggtttttga
tttttggctcggacatacccgtcacctcgcttATATATGTATTATCTTTG
CAGAAAATTGCCTCACAGAAGTGAATAAAATGTAGAGGCATCCAGGGCTA
ACCTTTTCATCTATCAAAAAAGAGATTAAGTTTAAGGGCGAGGTTGACCC
AAACATAGAttaataaaacaaagacaacacGAGGATATATGTCCTAATAG
GCGTATATCAATCGTCCTTTTGctgttttcagattttaacaCGGATTCGC
CTATCCTTCAAACCGAATCACGAATCCCTCACCCCGAACCAACAACAATT
CAGACTGAATCACTAGTCCTTCAAACCATTCCAACAACAAGTCAGACCGA
ATCACGAATCCCTCACCCCGAACCATCTACAAGTCAGACTGAATCACCAG
TCCTTCACCCCGAACCATCTACAAGTCAGACTGAATCACCAGTCCTTCAC
CCCGAACCATCTACAAGTCAGACCGAATCACCAGTCCTTCAAACCATTCC
AGTGAAGTTTCAGACCGAACAGACCGAATCACCAATCCTTCAAACCGAAC
CATCTACAATTCAAACCGAATCAACAGTTCTCCAAACCGAACTATCTACA
AGTCAGACCGAATCACCAGTCTTTCAAACCGAACGATCGACAAGTCAGAC
CGAATCACCGGTCCTTCAAACCGAACCATCTACAATTCAAACCGAATCAC
CAGTCCTTCAAACCGAACCATCTACAAGTCAAACCGAATCAACAGTTCTC
CAAACCGAACTATCTACAAGTCAAACTGAATCACCAACCCTTCAAAACGA
GCCACAGTTAAAAGAGATCAAATCAGGAAATAATAATTATTATTACCATT
TATATATATTTCTCGGAGTTATCGCTGATGTTTTGCGTGAAAAATTCCAT
ATCAAATTTTCTAGAGATCCCAAAACCCTCTTTAAAGAACTAGAAAGGGA
ACAAGAGAAAATAAAtggatcaaaagaaaaaaagaacaaaccGTTTTTAT
ATAAAGATCAATTAGACCTATTGTTCCCGACAACAGGAGAAACTGATTCG
CGAACATTCGATATCACGCTATTGGCGATCCTTTTGCGTTATTTCTGTGG
ATATAACATTCCAAATACAAAATTCAAAGACTGGGGAAAATTAGATGCAA
AGGAAAGCGAAGAAAGTAAAATGTAGCAGTTAATCTTACTAAGACACAAA
ATTATCCATTCAGCGTGCATAACTTGGAAAGACTTTCAAGAAATTATAGG
AAAAGCTGAAAATCCTCTTAGAAAACTTGGGGTATCCCTTAAACAGtttg
aaaagataaaaacattcGCGTTTGAAGAGATCAACAAAGAGGAAAGGGAG
GAGGACAATGCACAAGCCTCTCAAAATCGAGCCTCTGAGAATCGAGCCTC
TCAGAATCGAGCTTCAAAAAACCACATTTTCCCCCCTGTTACCCATTTCC
ATGGACGTGATACGGAGATCGACCGAATTCATGATTCACTATCTCTACAA
AACGATGGAAGGAAAATTGGAACAGTAATCCACGGGTTTGCAGGTGTAGG
AAAAAGTGAATTAGCCAGAGCATATTGTAATCAATACAGCAAGAAATGGA
AACATATTGTCTGGATTGATATGAAGAATGAATCAACTACCAAAACGTCT
TTCCTTAAAGTCGCTCTGAAATTCGGTATAGAGCTCCTCCAAGGTGACGG
AAGCCGAAAAGAAAATTGGGAAATCATCTATCATTGTATTACCTACCAAA
AAAGCGCTAAAGATGGAAAAATCTTATTCATTTTCGACCATGTTAGTAAG
CAATCAGACATGGAAAAAGTTTTGAATCAACAAATGAGTCCCAGGCCTAT
TGTTCTTGTGACCAGCCAATGCCATCGAATAGCTTGGGACTCTAGATTCG
ATTTTATTAATCTTGACGTTTTTACTGAAGAGAAGGCTAAAGAATTCTTG
GGGGAACAAATAGATGATGGGGAGATAGAGAATAGAAGTGACACAATGAG
TAAGATTGTGCAAAAGCTGAGCTGCCATCCACTAGGACTTTACCAAGCCA
TTTGCTATATGAACAATCCTCCGATAAAGTCAATGGACGAGTACCATGAA
TTGTTAACAGACAATGCAGAAAAAACAGAGCTGATgaaatatgaaacaat
tttGATAGGACAAAAATCAACTTATGAATCCCTATCGACAATTTTAAAAC
GTCTTCAGGCGGCTGCGAAGGAGAAAGCAATCACCCTTCTAAAGTCATTA
GTGACAGACGATCGGGATCCAAATATATTGATAAAGGAATTAAATTCTGG
CAAAACCGATTTTAAAAAAGCAGTTGAAGATCTCTTACATTGCTCTATTA
TTGATCTGTATCCACACGATGTATCGGCCGGACAACAACAGTTTCGAATG
CTGGTATTATTCAAGCACATTTTCAGTGAACTCCTTAAAAAGCAGCCCAG
ATTCACAAGTTGTTCGACTGTCTCTGGTAAGATAATCATTTCCATGATCA
GAATATAGAGTTGGAATATTGGAATGATAATCTTTAAATGGATGAATTTA
AGGCTTCTTTTAAACctttgcaaaatttgagaaaaaatagtGTTATCTAT
TCTAATAAGTCTTAGCTGTACACACCTTCTATCATTAAAGGAAAGTCGAT
CTAGTCAAGTAAAGTCTGTCTCagaataatttgcagctgagacaaaaatg
gctgtaacattttattttcgccattttttgagtatatttgtctattttcc
taagaaattcagTGTtttgagtctgcaaagccttataatgtttttaactt
gttcttaacattttggccatcgaagcctaatattcttttatagtttgttc
ttataaaaaaaaacgtgtacgccACTTGCAATCAGCTGTCGTAAAGGTGA
CATTAAGTCGGAAGATATTTCAAGAGTCCATGTCCTGGATTATAGGCACA
ACAAAGCAAAAAATTATTCCTTATTAATTTTGCAGCTGCCGAGACAATTG
AGTCAAGCGACGAAAGAAAACTGACGGACTTGAAGAAAGTGGAGAAAGAT
CAGCTCCATccatgttttgaaaagagaggTGACCATTTAAAAAGCTGGAG
GCATTTGATCGACGAAATATTTGCACTCGAGAATgacaaaaatgaaatca
aagacGCCATCGAGATCCAACGGCTGATGGGCGGTGGCGCCGCTGGTCAA
TTCCTGGTCAAATTGTACAGAGTAAAACCGAGTCTTAAGATTGGAACTCT
AAGAGAATTTTGTTCTACGAAAAATCGAGGTGATATAGTTGGAATTCTAG
AGACACACAAAGAAGatgatgaaatttttaaagTATTAGGCGAAAATGAT
TTGACAAAACTTAGAGTAAAATTGGCACATGATGATTTTTGGATAATCGT
AGCTGAGTCAATTGTTGGTTTCTGtgatggaaacaataaagaagAAGTAA
GTTTGATAGTTAACCAAATCAAAGTTACTAACCAGCACATTGTCCAAACA
TGTACAGAAAGTTTTTTCGATGTTTTGAGAGAAAGAAAACATGATATGAC
AATAAAGCAATTAGCTGAATATTGTGGAAAACTTGGGATGGGTAACGCAG
TCAAATTATTGAACAAATTTGCATGTACATAATTTTTGATATGTAATCTC
TTAGAGGTTGGCTTGAGGTCTGTTTAATGACCCGGAATAGGGAAAGTTTT
CGGGAAAAAAATTAGCCAAATTTGTttaaatttgggcgaaaaatcgTCCC
TTATGGGTAACACGTcgtttttcacactttttaaacCTTTAGAGTGCACT
TTCTCTCATCGAGGAAGCCTGAAAAACGTACCCTTGGGGCCTACACCTAC
GATCATTATGTTTAGTGACATGATGGTGTacccaaaaacttaaaaatcct
tttagtatcatggggtactaaaataccaaaaagtgaTATCCaggcaaaaa
tttgagaattcTTTTAGTAATTTGGTACTAAAAATtagtaatttttatca
tttttgaatctttt

Coding sequence (CDS) from alignment at sc0000217:285479..292792+

>TCONS_00015810 ID=TCONS_00015810|Name=TCONS_00015810|organism=Clytia hemisphaerica|type=CDS|length=3006bp|location=Sequence derived from alignment at sc0000217:285479..292792+ (Clytia hemisphaerica)
ATGAAGAATGAATCAACTACCAAAACGTCTTTCCTTAAAGTCGCTCTGAA
ATTCGGTATAGAGCTCCTCCAAGGTGACGGAAGCCGAAAAGAAAATTGGG
AAATCATCTATCATTGTATTACCTACCAAAAAAGCGCTAAAGATGGAAAA
ATCTTATTCATTTTCGACCATGTTAGTAAGCAATCAGACATGGAAAAAGT
TTTGAATCAACAAATGAGTCCCAGGCCTATTGTTCTTGTGACCAGCCAAT
GCCATCGAATAGCTTGGGACTCTAGATTCGATTTTATTAATCTTGACGTT
TTTACTGAAGAGAAGGCTAAAGAATTCTTGGGGGAACAAATAGATGATGG
GGAGATAGAGAATAGAAGTGACACAATGAGTAAGATTGTGCAAAAGCTGA
GCTGCCATCCACTAGGACTTTACCAAGCCATTTGCTATATGAACAATCCT
CCGATAAAGTCAATGGACGAGTACCATGAATTGTTAACAGACAATGCAGA
AAAAACAGAGCTGATgaaatatgaaacaattttGATAGGACAAAAATCAA
CTTATGAATCCCTATCGACAATTTTAAAACGTCTTCAGGCGGCTGCGAAG
GAGAAAGCAATCACCCTTCTAAAGTCATTAGTGACAGACGATCGGGATCC
AAATATATTGATAAAGGAATTAAATTCTGGCAAAACCGATTTTAAAAAAG
CAGTTGAAGATCTCTTACATTGCTCTATTATTGATCTGTATCCACACGAT
GTATCGGCCGGACAACAACAGTTTCGAATGCTGGTATTATTCAAGCACAT
TTTCAGTGAACTCCTTAAAAAGCAGCCCAGATTCACAAGTTGTTCGACTG
TCTCTGCTGCCGAGACAATTGAGTCAAGCGACGAAAGAAAACTGACGGAC
TTGAAGAAAGTGGAGAAAGATCAGCTCCATccatgttttgaaaagagagg
TGACCATTTAAAAAGCTGGAGGCATTTGATCGACGAAATATTTGCACTCG
AGAATgacaaaaatgaaatcaaagacGCCATCGAGATCCAACGGCTGATG
GGCGGTGGCGCCGCTGGTCAATTCCTGGTCAAATTGTACAGAGTAAAACC
GAGTCTTAAGATTGGAACTCTAAGAGAATTTTGTTCTACGAAAAATCGAG
GTGATATAGTTGGAATTCTAGAGACACACAAAGAAGatgatgaaattttt
aaagTATTAGGCGAAAATGATTTGACAAAACTTAGAGTAAAATTGGCACA
TGATGATTTTTGGATAATCGTAGCTGAGTCAATTGTTGGTTTCTGtgatg
gaaacaataaagaagAAGTAAGTTTGATAGTTAACCAAATCAAAGTTACT
AACCAGCACATTGTCCAAACATGTACAGAAAGTTTTTTCGATGTTTTGAG
AGAAAGAAAACATGATATGACAATAAAGCAATTAGCTGAATATTGTGGAA
AACTTGGGATGGGTAACGCAGTCAAATTATTGAACAAATTTGCATGTACA
TAAATGAAGAATGAATCAACTACCAAAACGTCTTTCCTTAAAGTCGCTCT
GAAATTCGGTATAGAGCTCCTCCAAGGTGACGGAAGCCGAAAAGAAAATT
GGGAAATCATCTATCATTGTATTACCTACCAAAAAAGCGCTAAAGATGGA
AAAATCTTATTCATTTTCGACCATGTTAGTAAGCAATCAGACATGGAAAA
AGTTTTGAATCAACAAATGAGTCCCAGGCCTATTGTTCTTGTGACCAGCC
AATGCCATCGAATAGCTTGGGACTCTAGATTCGATTTTATTAATCTTGAC
GTTTTTACTGAAGAGAAGGCTAAAGAATTCTTGGGGGAACAAATAGATGA
TGGGGAGATAGAGAATAGAAGTGACACAATGAGTAAGATTGTGCAAAAGC
TGAGCTGCCATCCACTAGGACTTTACCAAGCCATTTGCTATATGAACAAT
CCTCCGATAAAGTCAATGGACGAGTACCATGAATTGTTAACAGACAATGC
AGAAAAAACAGAGCTGATgaaatatgaaacaattttGATAGGACAAAAAT
CAACTTATGAATCCCTATCGACAATTTTAAAACGTCTTCAGGCGGCTGCG
AAGGAGAAAGCAATCACCCTTCTAAAGTCATTAGTGACAGACGATCGGGA
TCCAAATATATTGATAAAGGAATTAAATTCTGGCAAAACCGATTTTAAAA
AAGCAGTTGAAGATCTCTTACATTGCTCTATTATTGATCTGTATCCACAC
GATGTATCGGCCGGACAACAACAGTTTCGAATGCTGGTATTATTCAAGCA
CATTTTCAGTGAACTCCTTAAAAAGCAGCCCAGATTCACAAGTTGTTCGA
CTGTCTCTGCTGCCGAGACAATTGAGTCAAGCGACGAAAGAAAACTGACG
GACTTGAAGAAAGTGGAGAAAGATCAGCTCCATccatgttttgaaaagag
aggTGACCATTTAAAAAGCTGGAGGCATTTGATCGACGAAATATTTGCAC
TCGAGAATgacaaaaatgaaatcaaagacGCCATCGAGATCCAACGGCTG
ATGGGCGGTGGCGCCGCTGGTCAATTCCTGGTCAAATTGTACAGAGTAAA
ACCGAGTCTTAAGATTGGAACTCTAAGAGAATTTTGTTCTACGAAAAATC
GAGGTGATATAGTTGGAATTCTAGAGACACACAAAGAAGatgatgaaatt
tttaaagTATTAGGCGAAAATGATTTGACAAAACTTAGAGTAAAATTGGC
ACATGATGATTTTTGGATAATCGTAGCTGAGTCAATTGTTGGTTTCTGtg
atggaaacaataaagaagAAGTAAGTTTGATAGTTAACCAAATCAAAGTT
ACTAACCAGCACATTGTCCAAACATGTACAGAAAGTTTTTTCGATGTTTT
GAGAGAAAGAAAACATGATATGACAATAAAGCAATTAGCTGAATATTGTG
GAAAACTTGGGATGGGTAACGCAGTCAAATTATTGAACAAATTTGCATGT
ACATAA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_008844	XLOC_008844	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00015810-protein	TCONS_00015810-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000217	supercontig	sc0000217:285479..292792 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.0997254	0	0.260393	0.0737816	0.431167	0	0	0.0637923	0.638908	0.16515	1.01875	0.346608	0.926661	1.01202	0.600312	0.743154	0	0.823923	0	0.0719843	0.16745	1.07856	1.52181	1.63969	3.47137	3.8939	0.0957388	0.229845

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00015810 vs. Swiss-Prot (Human)

BLAST of TCONS_00015810 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00015810 (transcript) - C. hemisphaerica