XLOC_008730 (gene) - C. hemisphaerica

Overview
NameXLOC_008730
Unique NameXLOC_008730
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000215:35375..39913+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008730 ID=XLOC_008730|Name=XLOC_008730|organism=Clytia hemisphaerica|type=gene|length=4539bp|location=Sequence derived from alignment at sc0000215:35375..39913+ (Clytia hemisphaerica)
TTTAGATACAAAACGTTAAAAGTATGCGTCTCGTTAATGTTGTGCTGACT ATTTTGACATCCAAAATTGCATTAGGAGAGGGAAGACCTCCATCACGTGA GAGTGATATTGATCAACAATTAATCCGACTAGCCCATGAAATTCGTCGTG AAATTCAGCCTGGACCGTTCGGAAATTATCGCGGATACGCACCACCTCGA CTTGGTAAAAGGGAAAATATAGACGGGAAGAAGGGTGTGACGTCACAGAA GAGAAGGACTGTTGAAGCTTTGGACAAAATTGGACAGATTTTATTGAATC ATCGCAAAAGCTTGTCTTCAGACTctgaagttttcaaaaatggtaaaaaa atgaTGACAGATCATTTGGATACAACCTCAAGGAAAAGAACTCATCATTT TATTAAAGCAAAGAATGTACCATTTTGGTATTTTAACAAAAGAGGATTGT CAAACCAGGTTGACGGAAAAAAGACCCTGGGTGACGGAAATAAACCGGCG TTTACTCATCATTCCCAACCTACGTTCGACAAATTTgcagatgacgtcat cgaaaaactAACTACCCTTAACAAACAAATCAAGCATGACGCAATAAATG AACGTGATGAAAAGATGAAGAAGAGGGAAAGAGTGGGAATGAAAAGTAAA TGGAACTTTTGGCCTCCTAGGTTGGGTCGAAAAAGAGAAACCACTTTGAA CAGAAATATGGAGAAAGCAAAACATCCCTATGATCGAATTCTTGATGata aaaagggcctgtaaaaaggcacagcgTTTGACGTTGAAATTCTCAATAGC CCCGATCTCATTATTAAAGGGAATCTTGTCAGTCACCCATGATGATTTTG GAGTGTAAATAAGTATACTTTTACATTATATTTAGTACAgaattttgctt tttatttattGACAGTATAAATAGACGAAATAATTTGACATGGTTTTCCA TTGATGAGAGACTCAAAAGAAAACTTGAAGAAtttaaaagccaaaataaa tttgaacTGCATGACCTTATTCTATCACTCAATGGAAAGTTCTTTTTGAT CTTTAAAAAACATTCTTCCGTAGTGGTTTAAGCCTATACTTTCATATCTC GAGTTTTCATAAATCAGGTCACAAGCACTTCTTCAAATGGTCATCTCGAA AAGAGGCTGATCAATTTTTGGGATCTTAGAACTCGGCTggtaagtttttt cttttttgaaaagctcttgGATAGTCTAAATTCAGAAGTTTCTGGCTTTA GATATTCACcacttttaaattgaaaaacgCTTTAAAGCTATTGTTGATTC TTATTCTCATGTTGACACCCATGTGTCAGTACCTTGGTCAATTCATCTCC GGTGAGAATCCCCCGGTGAAGGAGAATGTTCCAAAAAAGTTTTCCTTTCG ATCTATTCGGAAAACGAGTTACCCCTAGCTTAAAAGATAAAGATTTAAAC CTAAAAGGTTTAGTTTGAAAAGGTTTTTCAAAGTTATTGGAAAAAAGCCC TGAAACTAAACGTTCATGCTATTCCTTGCGAATTCATTATATCTGAGACT GTCTaaaagagcccccccccagtggaccctcaattcacgcaatcacacaa ttttttttcgaaattcacgcattcacgcaaattttcctccagtttcacgc aataacccaatttttcagaaaatcggaaaattttcgggaaaatcggggaa acattgggaAATTGGGAACACTGCACACAGTcagtggaaaaaagggaaaa ttcactaTTCActcacaaaatagcccagattcacccATTCACGCagtcaa aaagtggattttcatgttcacgcaagttttttcaattttcacgcattcac gcaaccgaaaatgcccatttacgcattcacgcaaacccctTGGAGGCCTA AGAGGGAACGCTACGCAACAGCACGTCtgaatacacattttttaaataag caACAAAGTTACTAAGGCTGAGCCCTGAAATCAGCTAAATACTTTTACTA TCTCATAAAGGAGaagctttttagataaattTAACTAAGGTAGTATATCC CTTCAGCCACAAGAATAATATTATAACATGAGGGGTggtcaaagaaaaat tgagcCATAGAATGCCCTGAGTCTTTGTTGCATATAAAAGTTATATgtag tttgtttttttaatccTTCTGAATGTGAAAATGTACTCGTCAGTACCTTT TTCggaaaattgaacatttttcagaaaaaacccGTTGTGGAAATTCCCAG TTGATTAAATGTCCGCCAGGGTATAGTCGTCCGGGTACGGTCGTGAAATA ATCCATTCGGGGTCNtaaattgaaaatttttcagaaaaaacccGTTGTGG AAATTCCCAGTTGATTAAATGTCCGCCAGGGTATAGTCGTCCGGGTACGG TCGTGAAATAATCCATTCGGGGTCAGTCGAGAAAGCGTCCGTTGGGAAAA ATCTGTCGGAGAAAGATCCGGTAATGCCCTTTTTTTCTCAGTCACATGTT TTACCTGGGAACGCTACCAGACATATTCAACTGACGAGattacttttcga atttaatCGGGTTATAAGCAAAACTAGACTTTCTCTgataaaaaaatgaa cttttttctccttGTTTTTATGTGATCATTAGGCAAAAATCTATTGTCTA ATTTATCTACAAAAGATAAGCTAACTGAATTTAAGCTCGGGTTTACAATA AAATTTGAAgctaattttcaatttcttgtcGTGACCAAGTAGAGGTTTGA AGGCTACGTACCAACATTCAAGTATAAAAGCAgaatcttttgatttaaaa tttggtGGGGTTCAAACTTTGAAACTTCACAGGTATTTACCAAACCACAG ATAGTACAAGAATTTGGGCAATAGTCTCTTTTTCAACCTTTTAAGATCAG GGCTCCAAAACcaccaaatttggaaaatgccTTTTTTAACAATCTTTAAA TGAGCCCCCCGCCGAGTGGTTTCCGTAATGGCGTGATTGGCGTTTTTTCA AGTTCAtgatttcgtgatttaagattttaaagtgaCGAGACTGTATGACC GGAGGAACCATCCAATgtgatcgtgatagaaaggAAAATTGACTtgtgat tgcgtgatttgaaagTGACTGGGGGCCTCTTAAATATGTCAtgagatatt ttttgaatttgctTCTAGCAGGTTCCAAAATCAACATTTCATTACGAATC ATCATGTTACAATGCGGTTCCAATTATCATCATCCTCCTGCTCCTCTCTG ACTGATTTATAACATAAAGGAACGCTACTTTATTCGATTTGTTACCTTCT AGAGGTGGAATGTGACAAATCTAATGAAACAGAATCTTAATTTTTCAGCC TGAAATCATAGCGTGCCTTTTTAATTTGCTTTTAGATCCAAGACGAAACA TGACACGACTGGTCTTCTTAGTTTTGTTATTACCATGTTGCTGCTTCTGC GCAGAAACAGAAATCACCGATAAACACACATTATCCACCACGTCTATGCG AAATAAGAAAGATGCGACGGATCCACAGTTGCTGTTCTGGCCACGTGTTG GAAAAAGAGAATCGAACGATTTCAACGAGCTTGATATCGTTGCTGGTTCT AATGAAGCAGGAAGTAGAAGACAGGCTGTGGACTTTGAAAAGCGTTTTCC ACTCCATCCAATCAATATTGATGAAGCTCAAAACCGGCTTAACACGAAGG AGTATAGGCTGAGAAAAATCTCGCCCTTCCTTCACCGAAAAACAAGTTTC TACCTGCCGTTCACGCAACACAATTTAACACCTTTTCTTCATAAAAGAAG TCCGGAAGATTACTCACAAATGCCGTTTCTACACAAAAGAGAGCTTCCAT TGAGATTCTTGACCCGGAGACGTCAGATGCCGTTTTTACATAAAAGGGAT GACACGCCGTTTCTGCATAAAAGGGATAACACACCGTTTCTATATAGAAG GGATGACACGCCGTTTCTACATAAAAGACGTGCTACACCGTTTTTACATA AAAGACGTAACACGCCGTTTTTACATAAACAAAGTATGTCAACTTATGCT ATGTAAATGACATTTTAGAAATATGAATATGACTTTTAAACAGTATTTAG CGGGAAACTTGATATTTGGACCTCGCCATCGATGAGGAAAAGACTCAAGT TTTAGACCTTTAGAACCCTTAGAAAAATTCACCACTGAGTTTCTGTACAT TTCCAATTTAGGACCAAATTTTCTAAATCTTGACCATTTGAAGAGCAAAA GCTTTGGATTTTTGTGATATGGGACCTTTTATGTGTAAAGAGGTGTGGAA AGGAATCTCTCACATACAAAGTACCTATCTAAATTCTAAGTGCTCTACTT GTCTTGGGGCTTCAATAAAGTTGCGTATAGTGCGCATAGTCTTCTAAAGA CATTTTAAGGAATATGAGGTTTATAACAGTATACTAAGGTAAATGtacaa aaattattcaaaaaattttcatttaaaattcatgaatcattgaaaatttt atttttcttaatttgaaATATCACAAATCAACAAGAGGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00015647TCONS_00015647Clytia hemisphaericatranscript
TCONS_00015648TCONS_00015648Clytia hemisphaericatranscript
TCONS_00015649TCONS_00015649Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00015647-proteinTCONS_00015647-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000215supercontigsc0000215:35375..39913 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.03 0 0.02 0.05 0 1.77 1.72 3.52 3.56 1.15 3.88 8.28 7.94 0.16 0.09 4.1 5.8 9.37 16.1 3.2 2.79 0.64 0.76 3.43 3.66 0 0 0.16 0.11