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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015649 ID=TCONS_00015649|Name=TCONS_00015649|organism=Clytia hemisphaerica|type=transcript|length=1187bp
ATTTACCAAACCACAGATAGTACAAGAATTTGGATCCAAGACGAAACATG
ACACGACTGGTCTTCTTAGTTTTGTTATTACCATGTTGCTGCTTCTGCGC
AGAAACAGAAATCACCGATAAACACACATTATCCACCACGTCTATGCGAA
ATAAGAAAGATGCGACGGATCCACAGTTGCTGTTCTGGCCACGTGTTGGA
AAAAGAGAATCGAACGATTTCAACGAGCTTGATATCGTTGCTGGTTCTAA
TGAAGCAGGAAGTAGAAGACAGGCTGTGGACTTTGAAAAGCGTTTTCCAC
TCCATCCAATCAATATTGATGAAGCTCAAAACCGGCTTAACACGAAGGAG
TATAGGCTGAGAAAAATCTCGCCCTTCCTTCACCGAAAAACAAGTTTCTA
CCTGCCGTTCACGCAACACAATTTAACACCTTTTCTTCATAAAAGAAGTC
CGGAAGATTACTCACAAATGCCGTTTCTACACAAAAGAGAGCTTCCATTG
AGATTCTTGACCCGGAGACGTCAGATGCCGTTTTTACATAAAAGGGATGA
CACGCCGTTTCTGCATAAAAGGGATAACACACCGTTTCTATATAGAAGGG
ATGACACGCCGTTTCTACATAAAAGACGTGCTACACCGTTTTTACATAAA
AGACGTAACACGCCGTTTTTACATAAACAAAGTATGTCAACTTATGCTAT
GTAAATGACATTTTAGAAATATGAATATGACTTTTAAACAGTATTTAGCG
GGAAACTTGATATTTGGACCTCGCCATCGATGAGGAAAAGACTCAAGTTT
TAGACCTTTAGAACCCTTAGAAAAATTCACCACTGAGTTTCTGTACATTT
CCAATTTAGGACCAAATTTTCTAAATCTTGACCATTTGAAGAGCAAAAGC
TTTGGATTTTTGTGATATGGGACCTTTTATGTGTAAAGAGGTGTGGAAAG
GAATCTCTCACATACAAAGTACCTATCTAAATTCTAAGTGCTCTACTTGT
CTTGGGGCTTCAATAAAGTTGCGTATAGTGCGCATAGTCTTCTAAAGACA
TTTTAAGGAATATGAGGTTTATAACAGTATACTAAGGTAAATGtacaaaa
attattcaaaaaattttcatttaaaattcatgaatcattgaaaattttat
ttttcttaatttgaaATATCACAAATCAACAAGAGGA Run BLAST on NCBI transcript from alignment at sc0000215:38209..39913+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015649 ID=TCONS_00015649|Name=TCONS_00015649|organism=Clytia hemisphaerica|type=transcript|length=1705bp|location=Sequence derived from alignment at sc0000215:38209..39913+ (Clytia hemisphaerica)
ATTTACCAAACCACAGATAGTACAAGAATTTGGGCAATAGTCTCTTTTTC
AACCTTTTAAGATCAGGGCTCCAAAACcaccaaatttggaaaatgccTTT
TTTAACAATCTTTAAATGAGCCCCCCGCCGAGTGGTTTCCGTAATGGCGT
GATTGGCGTTTTTTCAAGTTCAtgatttcgtgatttaagattttaaagtg
aCGAGACTGTATGACCGGAGGAACCATCCAATgtgatcgtgatagaaagg
AAAATTGACTtgtgattgcgtgatttgaaagTGACTGGGGGCCTCTTAAA
TATGTCAtgagatattttttgaatttgctTCTAGCAGGTTCCAAAATCAA
CATTTCATTACGAATCATCATGTTACAATGCGGTTCCAATTATCATCATC
CTCCTGCTCCTCTCTGACTGATTTATAACATAAAGGAACGCTACTTTATT
CGATTTGTTACCTTCTAGAGGTGGAATGTGACAAATCTAATGAAACAGAA
TCTTAATTTTTCAGCCTGAAATCATAGCGTGCCTTTTTAATTTGCTTTTA
GATCCAAGACGAAACATGACACGACTGGTCTTCTTAGTTTTGTTATTACC
ATGTTGCTGCTTCTGCGCAGAAACAGAAATCACCGATAAACACACATTAT
CCACCACGTCTATGCGAAATAAGAAAGATGCGACGGATCCACAGTTGCTG
TTCTGGCCACGTGTTGGAAAAAGAGAATCGAACGATTTCAACGAGCTTGA
TATCGTTGCTGGTTCTAATGAAGCAGGAAGTAGAAGACAGGCTGTGGACT
TTGAAAAGCGTTTTCCACTCCATCCAATCAATATTGATGAAGCTCAAAAC
CGGCTTAACACGAAGGAGTATAGGCTGAGAAAAATCTCGCCCTTCCTTCA
CCGAAAAACAAGTTTCTACCTGCCGTTCACGCAACACAATTTAACACCTT
TTCTTCATAAAAGAAGTCCGGAAGATTACTCACAAATGCCGTTTCTACAC
AAAAGAGAGCTTCCATTGAGATTCTTGACCCGGAGACGTCAGATGCCGTT
TTTACATAAAAGGGATGACACGCCGTTTCTGCATAAAAGGGATAACACAC
CGTTTCTATATAGAAGGGATGACACGCCGTTTCTACATAAAAGACGTGCT
ACACCGTTTTTACATAAAAGACGTAACACGCCGTTTTTACATAAACAAAG
TATGTCAACTTATGCTATGTAAATGACATTTTAGAAATATGAATATGACT
TTTAAACAGTATTTAGCGGGAAACTTGATATTTGGACCTCGCCATCGATG
AGGAAAAGACTCAAGTTTTAGACCTTTAGAACCCTTAGAAAAATTCACCA
CTGAGTTTCTGTACATTTCCAATTTAGGACCAAATTTTCTAAATCTTGAC
CATTTGAAGAGCAAAAGCTTTGGATTTTTGTGATATGGGACCTTTTATGT
GTAAAGAGGTGTGGAAAGGAATCTCTCACATACAAAGTACCTATCTAAAT
TCTAAGTGCTCTACTTGTCTTGGGGCTTCAATAAAGTTGCGTATAGTGCG
CATAGTCTTCTAAAGACATTTTAAGGAATATGAGGTTTATAACAGTATAC
TAAGGTAAATGtacaaaaattattcaaaaaattttcatttaaaattcatg
aatcattgaaaattttatttttcttaatttgaaATATCACAAATCAACAA
GAGGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00015649-exon-sc0000215-1491911889:38209..38241 | TCONS_00015649-exon-sc0000215-1491911889:38209..38241 | Clytia hemisphaerica | exon |
| TCONS_00015649-exon-sc0000215-1510915933:38209..38241 | TCONS_00015649-exon-sc0000215-1510915933:38209..38241 | Clytia hemisphaerica | exon |
| TCONS_00015649-exon-sc0000215-1575043694:38209..38241 | TCONS_00015649-exon-sc0000215-1575043694:38209..38241 | Clytia hemisphaerica | exon |
| TCONS_00015649-exon-sc0000215-1491911889:38760..39913 | TCONS_00015649-exon-sc0000215-1491911889:38760..39913 | Clytia hemisphaerica | exon |
| TCONS_00015649-exon-sc0000215-1510915933:38760..39913 | TCONS_00015649-exon-sc0000215-1510915933:38760..39913 | Clytia hemisphaerica | exon |
| TCONS_00015649-exon-sc0000215-1575043694:38760..39913 | TCONS_00015649-exon-sc0000215-1575043694:38760..39913 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000215 | supercontig | sc0000215:38209..39913 + |
Blast
The following BLAST results are available for this feature:
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