XLOC_008677 (gene) - C. hemisphaerica

Overview
NameXLOC_008677
Unique NameXLOC_008677
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000212:396489..405723-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008677 ID=XLOC_008677|Name=XLOC_008677|organism=Clytia hemisphaerica|type=gene|length=9235bp|location=Sequence derived from alignment at sc0000212:396489..405723- (Clytia hemisphaerica)
CCGTCGTATTAACCGTAGTATAGCAGGAATTATTCAATGGAATAATGAAT AATGGTGTATTGGAGGATCTAAATTATGGACAAATGCCTCCAAAGTTTGA TAGGTTTGACCATCGTAGAACAATAACAACAACTCTTCAAGAATATTTCT TGCCTCGCTTATTTCACTAATAAGGAGTATTGTTTTCAAATTTGTTCGGA TATTTTTTATTCGTTTTTGACAATTGTCTCTCAAACTTTTGTCAAAACGT TTGAGAACATTGATTTCTGGTATAAAATATTCTTTCAAAAAGCCTTCTTT TAAAGCCTCTTGTAAATCAGTAAATAAAATGTCAATCGTCTCCCAAATCC TCGTGTCATTTAGCCAATCGTCAAAGTATATCAAATTGCTGTCTTCAAAT CTCCATAAAACGATAGTTTTGACGATGTAAGAAGTTACTATTTCTTCATC TAAAAACTTTAACGATTTACTGAATATTGATTTGAAAATCACGTAAACAA GTTTTTTTGCATCAGAAAAAGAGTTCAATATAAAATTCTCGATATGAGAG AAAGAATAAGTCCATTCTGTTGTATTGATGTTGTGTTTTTGCTCGCGTGA TGTTTTAGATAGGACATAAATATATTCTGATATTTCTCTACTAACATTGT ATTGTGTCCTTGCTAGAAAATTTAACATGACCCTTGGTCTGTAAAATACT TTAAACATAAAAGCATAATCGAGCTCGGTGGTCAAGTAAAGTTTCTCATC TTTCTGAATTTCAAAAATATGTTTCACAGTAGATTTGCTTGTTTTCCCGG AAACCTTTACATTTATACTTTTGAATATGATTCCTCGTTTTAAGAAATGA TAGAGAAAAAAAACTTGGACTCCTTTTTCCTTGGTGTTTGATTCAGCACC ATTCAATCTATCCTTTACCTTGCTTTTAAACATGACTGGTCGGATATATT TGGTTGCTTTCTCGATAAAAACATACCAAGTTCCTTTATCTGGTATACAG CGGGTCAGGAATTGTACATATCCCGGTTTTCCTTTTATTTCTCTCAGACA TTGTCGGGGTTTTTTCAGATCTAGTCTAAGATTCATCAAGCAATCAATGT CAATCTGTCTAGTGATAACCGACCCTTTGTATTTCAGATTTTCTTTAAAA AATGATGCGATAAATGTTCCTTGATTGAGGCTTCCAGTCAATGATGCTCC TTCGTAAATATCGGAAAATGATTCATATGTTGCCATATTAATAAACGATT GAATAACTTTCTTCAGAATTTCCTCTCGTTGTTGAACTTGTCGAAATTCT TCAATGAGACATTCTAATAGGGTGTAAAATAGAATTGTTTTATTAAGAAA GGCAGAACATTTTCAGAACAAGTATTGAAAATATGTATATTGGACGGCAT ATTTTTCAAAGTCTAATTGAATAAAAAATCCAGGATTTTGAGGCTTGCTT ACTTTCATCATTCAGAAAGAGGATGTTTGTTTTTGACAAATTATTAAAAT AAACAGGTAATAAAGTCCCAAGGAAAAATTAGAGATTCAAAATATGAACA GGTTCCTTGACTAGTGTAAGTGTCAGTGTAAACAATAGAGGTTAAATTGG ATTTCTTAAACTTACTATTGACTCTTGAATTCGTAGTCAAAAGTTCGATG CAAAAATGAAAGGTAAAAACAAACAAAATTCTTTGAATTGGGTTTTTGTA CATCCTTCTTCATCAATAACACGAAACAGTGCACAAAATGTACTTATCAA ATCATAAACTAAACGATGAATATTTATATCTTCACTTGTCTCACTCTCAA AAGTACTTTCTGTGCTACGGACGATTTTATTGCTAAAGAGAGATTTATAT TTGTTCATGTCTCTTACTGATTAGCTCAGAAGAAATCAATCAAAAGTTTT TAAAAGATCCTTTTAAGCTAGAGTAGATTATCAGTAAGTTTATGCGTTAT TTTATCATAAGAACATCCAACAATTTTTGGATTAATCTGGTGTTTTATAC TCTGCAAAGCCTTAAAATGTTTCTGAACTTGTATTTGGCCATCGAACCCT TATGTTCTTATATAGTTTGTTCTTATATAAAATAAACGTGATAGGGAGAC TATTTTTACTTAGATTAGATTTCTTAAACTTGACCCTTCAACGAGTGTGT CTTTTTATTTGTCTGTGCCTATAATAATGCGAGTTTTTTAACTGACAGTT CTTAAAATACAATGGCTTTTTCACGAGCCGAGCCGAAAAGAATTATCTCG TCATTAGACATTATCTTGTTTGGGGGTTTGCAACTGAATGACGAAATATT TCGTCAGAGTCCAGTGGGGTTTTGTTACCATAACTGAAAAACAAAATGAC TTCAGGCGAAAATATTTCTTAAACCTTTTTTGACCCTTTAACGACTGTAT TTTTATGTATCCGTGCCTATGATACTGCGATTTTTTTAACTGATCACAAC GGCTTATTCATGACTGTATTTTTACGACTTTAGTACTAAACTATTAAATA CACATTCATTTTAAAAAAGACTTCGAGTTTAATTTATGTCATTTAGTGTA GTGTTGAATTTTATTTTTGCTCGAAAAAGGAAATACTTAAAAAAATTTGG AAACGAAAGTACTTGATACGGTGGACGAACTCACTAAATTTAATTTACAA ATTACACGCTCGTATAACCACAGACGATTTTTGCGGGTTTTCTTTGGATT ACGTCGTATATCTTTGTGATTTTTTTCTTCATTTTTTTATACTTTATAAG AATCAAATCAATAATTCTTGATAGACGGTGATATAGCCTTTCGGTAATTA GTTCTTTCAAAGTAAACAAGGGATGGTGCACAATATGAGCATATTCATTT TTCTTATAAGCATTTACTTTATAAGAATCAAATTAAAAACTCTTGATAGA CGGTGATATAGCCTTCGGTAATTAGTTTTTACAAAGTAAACAAGAGATGG CAGGCGNATTACATACTCCAGGCTCCGTAAGGTTCCTTATTATAATTGAA AAAGCGTATACTAACAAACGATACGGAACTCGTGAGAGTGTTTTTAAACT GTTGTCTTTGTTTATCTTCACAAGATTTTGTTTATCTTTGCGACTTAGTT CTCGCTTTCGGCCTTTCTTCTACTCGTTTTCAGCCTATCACCTTCGATTT CAGCCTCNTCAAATCAATAACTCTTGATAGACGGTGATATACCTTTCGGT AATTAGTTCTTACAAAGTAAACAAGGGATGGGGCGCAATATGAGCATATT TATTTTTCTTATAAGCATATACTTTATAAGAATCAAATTAAAAACTCTTT ATAGACGGTGATATACCCTTCAGTTATTAGTTCTTAAGAGTTAAACAACC ATTGTTCTAAAAATGGTCTTTTCTTTTTAGCGATTTTGAGCCTTGTTGTT CATATAAAATTGTTTCATCAAGGCTCAATGTAAAGTGGATTTCAGATTAG CTTCCATCTCTACTTCTTGTTTTTCCCATGAGGTTTAAACTTAAGGCGTA ATTTTCGACTTCAATTCGTCTTGTTTTACTTCCCTTAGAACTAAAACTAT AAACGTAAAACCATTGGCATACAGGAAAACTGGGAGCAGNCCGCCTCCCG CCTCCCGCCTCCCACTTTCGTTTTCAGCCTCCTGCCTCCCACTTTCAATT TCAGCCTCCCGCCTCCCACTTTCGTTTTCAGCCTCCCGCCTCCAACTTTC GTTTTCAGTCTCCCGGTTTAGCCTCCCGTCTCCCACCTCCCACTTTCGAT TTCAGCCTCCCAACTCCCAGCTCCCGGTTCAGCCTCCCGCCTCCCGGCTC CCAGTTTTCCTGTATGCCAAACCATTAGTTTTTAACGATCAATTTAGATT TACTTTCTTTCGGTATATCAGATGACACTTTTTCAATAACCGCGGTATTG TGTGAACATAGCGCCATCGCAAAATATCTCGGCATCAGTATTTTTGGCAT GACATGCGATGACGGGATATCTTATTAGGAGTATTTTTGGCACGGAACGC GATGATGAGGCATATCGTATATCACTCCTTAAATGGTTAATAAATAATTT CAATTAACTCCTACCATCATTTAATTCTAGTGTCCAATTTTATATAAGAA ATAGACCTAATTCCCTCTTTATATATTATAAGTTGTGATTTAAAAAAAAG AAGCCTAAACTAAAATTTGCTAGCTCTTCTTTAACCAGCTTTTTATTTAT ATTTTCCTTACATACACATGGAATGACTAAAAATGGTATAATGTTTTTCT TTTGTTACATAAAAATGCGAGATTGATATAAAAATCGACAAAACCCTATA CAAATACAAATACACTAGGATAGGGAATAGCGAAAGATCGGAAGGATGGG TGCAGTCAAATTTGATTGAATATTTAAAAATACTTACTAATTCCTGAATT TTTAGTTAAAAACTCAACTTGAAAACAGAAAACAAAAACAAATAGTATCC TCTGAATAGTCAAAACTTCCATCTTTTATGAAAGACACAAATGCCTTGTT ACATATTACATGTTACATTTCTGTTTTATTAGACTTTTCGAATTTATTAA AAAAAGAGATCTTATTGAATGATAAAACTGCAGTTTTAATCAGATTTATG AATTGCGATGTTTTTTGTTTTTTTATACTCTTATTAGTCCAGGGAAAGTG TGCATCAATTGTGCGTTTTTGACTAGAAAGCATGAAATTTGGTACAGTGG TACCTTAGGGGGTAAGAAACATTTTAAGCCTCTGACCCATTTCTAGAACA CCTGTTTGTGTATTTTACAGACCGGAATGCCTCCCAGGCAAGAAAAAAAA ATTTTATCTTCAAAGCATGTCATATGATATATCGTTGGAAAGGTTTTCTC ACACTGATTCTAAAAAACATCACAACATATATCTGCAAATGGACTGGGTC CGAGTTATGGGCTACGGAAGTAATTTACAGACCAGTCTGCATGCCCGAAA AAAAATTTTGTTTTTGTTCTAAAACATGTCAAATCATATACTGTTGGAAA GGATTTTTCACACTGATTCTAAAAATCATCATGATATGTATCTCAAAATG GACTGGGTCCGTGAAATAAGCCATAGGAGTAATTTACAGACCAGAACGGC TCCCCGGCATACAAAAAATATTTTTATCTCCAAACCATGGCATATCATAT ACCGTTGGAAAGGTATTTTTACACTGATTCTAAAAAATATCACAACATGT ATCTGAAAATGGACTAGGTCCGAGTTATGGGCCAGGAGCCATTCTGGTCT GTAAAATACTCCCATGGCCTATAACTCGAACCCAGTCCATTTTGAGATGC ATGTTGTGATGTTTTTTGGAATCAGTGTAAAAATACCTTTCCAACGGTAT ATGATATGTCATGGTTTGGAGATAAAAATATTTTTTTGTATGCCCGGGAG CCGTTCTGGTCTGTAAATTACTCCTATGGCTTATTTCACGGACCCAGTCC ATTTTGAGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNGAGATACATATCATGATGATTTTTAGAATCAGTGTG AAAAAACCTTTCCAACGGTATATGATATGACATGTTTTGGAACAAAAATA AAAAATTTTTTCGGGCATGCAGACTGGTCTGTAAATTACTTCCGTAGCCA ATAACTCGGACCCAGTCCATTTGCAGATATATGTTGTGATGTTTTTTAGA ATCAGTGTGAGAAAATCTTTCCAACGATATATCATATGACATGCTTTGAA GATAAAAAATTTTTTCTTCCCTGGGAGGCATTCTGGTCTGTAAAATACAC AAACAGGTGTTCCAGAAGTGGGTCAGAGGCTTAAAATGTTTCTTACCCCC TAAGGTACCACTGTACCAAATTTCATGCTTTCTAGTCAAAAATGCACAAT TGTATTCATTTTTAGCACACTTTCCCTGGACTATATGATAGAAATCCAAT GACAGTCTTTTCATTAATATTTCTCATTTCAGAACTATTAGTTCTAAAAC TTTATTTGAAATCATCTTTCTAAGAGTTCTCTTTTCGCTAAAAATAACCC CTCAAAGATTAGGGTTCAGAGGACCTATCAGTACATATCCGGTATTCTTC AATCCTTAAACTCTTGGCCTAGAAATATCGACGAGCTGCACGCCAACAGC CTAGAAAATAGAATTAGCAAACAAGTAAGCCATGTAAATATCGATATTTC CAAACGTTGGTCGTCTTTTAACTGAAGGACTAGCTAGAGAACTCTTAGAA AATTATTCGAAAAATCTCCCCCTAACTTTTAGACATGTTACCGTTTTCTT ACTGTTAGAGTCCTTAAAAGATTAGAGACTGTGAAAGATTAAAATAAAGA CCCTAAAACCCAACAAAAACCCAGCACCCTACTTTGGCCAATTATGCTTT TATGGGGCGGAGGTTCAGGGGGTACCCGATTCCGCAATTCCGCAAATTTC TTCTCCATTTTCCGTCAAATGGTCTGAAAACCGAAATTCTGCCACGTTTT TGTCGAAAAATTCCGCGAATTTTGAATATTTCTTGCAAATTCCGAAATTC CGCCTTTTTTGAGTTGATTTTGAATTGATTTTCCCTAAGTTATCTCATTG GTTGAATTTTTATTACGGAATGCAAGTATGGTTTTTCTCTATTCATTCAA CTATGTACATCTACACCATACAAGCTCATGCTGTATATTATAGCTTGATT AAAAAAATCATTTGCGTACTTATCATTAAAAAATCATGATCNCTCATGCT GTATATTATAGCTTGATTAAAAAAATCATTTGCGTACTTTTCATTAAAAA ATCATGATCGAAATCATGTTCCAATTTTTTACTTATTTAAAATGAATTGG AAAAATCGTTTTTACAATTTCTTTTCAAATCTTGGATGAAGCTTCTCCTC CTAACGTCCTTTGTTCTAAGAGGTACCCAAACCTACCTCTTGTAACAATG GACTCAATGAGGGGAAGGCCGATTAATAAAAGAATTCGTAAAAAGGATTT TGCAGTCTTGAGAGTCAATTTTGCTCATGCAACAGTTAGAGACCTTAAAA GATTAGAGACAGTGACAGATCAAAATAGAACCTTTAGGGAAACACGTTTG ACTTATTGTTGTTTTTTAACCATTGAAGAAACTTGCAATGATCGAAAACC CAACAAAAACCCAGCACCATATTTTGCCCAATTATCCTTATATAAAGCAC GGAATTCAAAACTACCTTACTTACCTAAATATTCTCAGGTGAATAAAATT GAACAATAAGCAGATATTCAATAGGTAAAATTTGGTCATAAAGGGTGGGT TTACATCTAGGTGAGAATCAATATTAAGAATTACAATAGAGATTTCATCA CGATTTCCTTTTTTGATTTATAATTGATTTTCCTTAAGTTTTCTCATTGG TTGACTTTTTATTACGGAATGCAAGTATGGTTTTTCTCTATTTATTCGAC TATGCATTTCTACACATACAAGCTGACGCTGTATATTATAGCTTGATTAA AAAAAATATTTTTATACTTTTCATTAAAAAAATCATCATCTAAATCATGT TCCAATTTTTTACTCATTTAAAATTAATTGGAAAATTCGTTTACACATTT TCTTTTCCAATCTGATGGATCTTCTCCTCGATACGTCCTTTGTACCCAAG GAGGTACCCAAACCTACCTCTTGCAACAATGGCCTCAATAAGGGGAAAGT CAGTTATTTTCGTTTATGTTCGGAATTGCTATCGACAAAGGGAGTGGTAA TTGATTCTCTCCTAAAAAAAGTATCGAGTTGGAACATGATTCTGAGTAGA AGGTTGTTGCATGTGTTTAACAAAATGTAAGAAAATTATATATATCAACA CATCAATTGTTTTTACGACAGTCAATATGATTAAAAACAATTAACTTACT TTACAATTCTCATAACGTTATGGTTATTCGGATTGTTTTTTGTTTTTTTT AGTTATTCATAAAAGATTTCTCGTGGCAATTAATATGACACAGAAAAACT TTGATAAACATTGCAAATTTAGTGAAACACACACAAGAACTTTCTTCCTA TACAGGGTGTCCGGAAAAAAAGTACCGAGTCATACCACTTCTATAGAAAG AAAGTTCTTGTGTGTGTTTCACTAAATTTGCAATGCTCATCAAAGTTTTT CTCTGTGTTCACCCGGACTTGTATACCTAAGGCGAAAAAAAAACATAAAT CATTTAAATAGTTAAACGACTTTGAAAGCAAAAATTCTACCGTTGTCTAA TAATCGTGGTATATCAGGAATTATTCAATGGCCTGCAGGTGTATGATAAT TTTTCTTATTTCTCAACATACATAAATGATAAAATAAAGTATAACAATTT TACGAAAAAGAGCGTAAAATCTCAACAAATCCCTCCACAGTTACATAGGT TCGACCATCGTAGAGCAATAACAACAACTCTTCAAGAATATTTCTTGCCT CGCTTAATTCACTAAGGAGTGTTGTTTTCAAATGTGTTCGGATATTTTTT ATTCGTTTTTGACAATTGTCTCTCAAACTTTTGTCAAAACGTTTGAGAAC ATTGATTTCTGGTATAAAATATTCTTTCAAAAAGCCTTCTTTTAAAGCCT CTTGTAAATCAGTAAATAAAATGTCAATCGTCTCCCAAATCCTCGTGTCG TTTAGCCAATCGTCAAAGTATATCAAACTGCTGTCTTCAAATCTCCATAA AACGATAGTTTTGACGATGTAAGAAGTTACTATTTCTTCATCTAAAAATT TTAACGATTTATTGAATATTGATTTGAAAATCACGTAAACAAGTTTTTTT GCATCAGAAAATGAGTTCAATATAAAATTCTCGATATGAGAGAAAGAATA AGTCCATTCTGTTGTATTGATGTTGTGTTTTTGCTCGTGTGATGTTTTAG CTAGGACATGAATATATTCTGATATTTCTCTACTAACATTGTATTGTGTC CTTGCTAGAAAATTTAACATGACCCTTGGTCTGTAGAATACTTTAAACAT AAAAGCATAATCGAGCTCGGTGGTCAAGTAAAGTTTCTCATCTTTCTGAA TTTCAAAAATATGTTTCACAGTAGCTTTGCTTGTTTTCCCGGAAACCTTT ACATTTATACTTTTAAATATGATTCCTCGTTTTAAGAAATGATAGAGAAA AAGATCATGCACTGCTCTTTTCCTGGTGTTTGATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00015550TCONS_00015550Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000212supercontigsc0000212:396489..405723 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.19 0.51 1.26 0.34 2.36 0.9 1.15 1.64 0.2 0.14 0.31 0.27 1.3 0.58 0.12 0.06 0.56 0.62 0.86 0.48 5.26 3.82 3.33 3.71 0.2 1.66 3.15 0.58 0.87 0.45