XLOC_008621 (gene) - C. hemisphaerica

Overview
NameXLOC_008621
Unique NameXLOC_008621
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000211:306097..316332+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008621 ID=XLOC_008621|Name=XLOC_008621|organism=Clytia hemisphaerica|type=gene|length=10236bp|location=Sequence derived from alignment at sc0000211:306097..316332+ (Clytia hemisphaerica)
AAAAAAAGTAAAGCACACAAACAGAAATAAATGTTAAACAATGCAACGTT CTCAAAATGTAAGTAGCAGACCCACTCGTACAAGACAAATCCCTGAACAG TTTAGTTTCAACACCTGTCAATTATAGTTTCAAAAGATAATTTATTAATC GAATCAATCACTAGAAGTTGAGCGTAAAATGGGCTATATAATAATACTTA GaggattatttaaaaaattttcctgtaAGCCTTTGTTTACCTTTAAAGAT atatcaatttctttttatacttttattAGGATCAAAGTCCTGCAAAAATC GAGGAACTATACAGTTCAACGCAGCAGAAATCTTTTGAGAGCATCATGAG AGTACCTTATCAACAAAAGCCTCCCGTCTACACCAATGATGCACGCTCTA TTGAATCACCTTACACTTCTTTGGGTTCATGTCGTAGCTCTTACGCCAGT ATTAAACCTAACAGTTACAGTTCACTTCGCGCTCGTTCTTTGAAGGCTAA TGCACAACACGAGAGTAAATCAAAAGGTATTGTTTCATTAAGAGTTAAGA TTCATTTCTGGAGTTTGAGTGTCaaatttttcgtgttttgattGGTAAAC CTGACAGCATTTTAAAAAGGTTACTTAGATGCTACACTGTTATAAGAGAG AAAACTGGATGAGTAAAATTGTCATTTGAAATATTCTGAAGATGCACAGC TGGTTTTTGGCTAACCTTTGcgtattttcaatttaatttttaggTATTCC AGCGTATTCATTAATTGCCTTTTGAAAACTTCTgtattatttttaataaa aagaaagaatatgaCTCTCACTGATAAAAGTCTTAGTAGTAAACAAATCC TTATATTCTATATGTTACAGCCGTCATGCAAGCATTACAAAATTTGCAAG ACAAGATAGGTGCGTTGGAGGTGGACCGAGCAAAAGCAGAAAACAATTTG AAGAGTTTGACAGTGGAAACAACAGAGTACAAAGaattattgaaacaaaa acatgACCTTTCCACCACGTCAACAGTTGGCAGCCCTTGTAGTTCAAAGC ATGGCAGCCATACAGAAGGTGAAAACCATTTTCAGATCTTACTTCCCATC CTCTTTTAAGCTAGAATGGATATATGACAGTCAGTAAACAAACTTGAAAC AACTAGATGACTAGAAAATTAATTAACAAAAGCtgcttttggttcatttt ttaaaatttattttctaaacgTTTCGGCCTCAACAGAGTACCATCATCAG TAAAAAATTTCGTTGTAATGAAAATTAGCTAGCTGTAAAATTTACAAGTT TAAAagtcattttatgcttgagagggggccttgagacgtatgtactaaat gctAAATCTAGTCTAAATtcggatcctaacctaagaatgctgtaagaata tcttaagatgattttcccaaaaaagttaagaatatccatgatgaaatgga tttacaccattcttataaaaaaagcgtgtattctgTTGAGGCCAAAAcgt ttagaaaataaatttcaaaaaatgaaccaaaagcagcttctgttatttaa tttttcacttAAGATGTATAGaaggattgatttatttgataGAGGATATT TTCGCATTTGACTGAGATTCTTGATTCTGGGACGAAAgagcttttctttt ttttttgcgccTTAATATTATTTAAATTTACCGAATTCAAACTCTAACCT AGTTTCGGCTCCTTTAAGGGAACAATTCGTggcaagaaatattttcaaag attccCCAAAGGGATTTTTGCCTATTACAAGTCCGGAGAaatcagttttg atttttaaagtaaCAAAAGAGACAAACATAGTAATTCAATTCATTTATTG GAGTGCATTTTTCAGGTCTACTGTTTCATTACAATCTCGTAAAATGTGGT GTTGAACatataaattaataaattaaaCAAATTAAAAGTGGAATGTTTAC TTCAACCTTCGaattagaaataaaaactttcaaaaatattttcacattGT TACAACAAAATCTGTTTCGATAAAATTTGCTCACTGTACGGGTGCGTATG GAAcgacttttttttttgacgatGTCAGTTTGACCATGTAGCGTCTGCTT TCCAACTGCATCACGTGTCACCATTGGAATGATGAAGGTCGTACCAACAA GAGGCTTTCTTTCAAGTTTTTATAGCCAACATTATTCTCATCAAACGATT TCCATATGATCCCTTTTGTCGTGTAACCGTGGTAGTTTTTGTAGGGTCCG TTCATTGCTACACGGTGACATTTTTCATGCCACCAAGCACCGTACCCTCT AGCCGCGCAATTATGACCTGCTACATCATTATCAGAATCAATGGTAGTGA ATTTCATTCCTCTCATCAAACGACCATAATCTACGGTAGAGAAGGTTGAA TCAATATCTTCTTCTTCATAATTGATCTGGTACTTcatactttcactttc gattctgACTTTGTGgattattttcctttttgtgaCACCGAAGAAATCGG TGCCTCGTACAAGGTAGTCGTGGTGTTCTGACGTTGTCAACAAATGTAAC AACTCATTACCGAGATAATACTCGCCTTCCGGATCACCAAAGCCATGTTT GAACTCGGACCAGGTTCGGTCTAAGAATTTTACACTACCATCAAATCGAC GCTGAAAGGCCATCCAACCGCCGCCAGCNATTAATAAATTAAACAAATTA AAAGTGGAATGTTTACTTCAACCTTCGaattagaaataaaaactttcaaa aatattttcacattGTTACAACAAAATCTGTTTCGATAAAATTTGCTCAC TGTACGGGTGCGTATGGAAcgacttttttttttgacgatGTCAGTTTGAC CATGTAGCGTCTGCTTTCCAACTGCATCACGTGTCACCATTGGAATGATG AAGGTCGTACCAACAAGAGGCTTTCTTTCAAGTTTTTATAGCCAACATTA TTCTCATCAAACGATTTCCATATGATCCCTTTTGTCGTGTAACCGTGGTA GTTTTTGTAGGGTCCGTTCATTGCTACACGGTGACATTTTTCATGCCACC AAGCACCGTACCCTCTAGCCGCGCAATTATGACCTGCTACATCATTATCA GAATCAATGGTAGTGAATTTCATTCCTCTCATCAAACGACCATAATCTAC GGTAGAGAAGGTTGAATCAATATCTTCTTCTTCATAATTGATCTGGTACT TcatactttcactttcgattctgACTTTGTGgattattttcctttttgtg aCACCGAAGAAATCGGTGCCTCGTACAAGGTAGTCGTGGTGTTCTGACGT TGTCAACAAATGTAACAACTCATTACCAAGATAATACTCGCCTTCCGGAT CACCAAAGCCATGTTTGAACTCGGACCAGGTTCGGTCTAAGAATTTTACA CTACCATCAAATCGACGCTGAAAGGCCATCCAACCGCCGCCAGCTTGCTC CATCAAACAATAAACCTTTCGTTTATATTTCCCCAAGATAATAACCTGAT ACACTCCATCGTTTCTGTATCCTAATGTGTACCATTGAGCACAATCCTGG GGAAAATCCACTGAATAATACTTTGTTCCTGGCTGAGTTCTCAATGCTCT CGATTGATTCTGATAAGTACGAAAGAGAACATCGTAGAAATTACAATTGT AGTACCTCGTGGCAGGCTTATAGTCGAACGAAAAACATTTGGGATCCAAT GAACAAATACTAATGCATCTTTGAGATGGTGCCTCCTCGATTGATTTGTA AGGTGTATAATCGATGCTCTTTCCCTCTGCTATCAAGTTGAATAGTTTAC CGGcttcaagaaacttttttccaaagaaTAGCAAGAAAAATACGAATGCT GTTAATTGCATCTCGTTTTTTCCcaattgtttctttctttttcaactcca aattgtttttgttaagtTTTACTTTATTCGTTCTTATAATGgtcaatttg aagaaaaaaaattgtttgaccAACAAAGCTTGAAAAGTTTTTCAGTAATG TATAAAAATATCCCTTCAATAAAACAAATAGACATAGAAATTCATCGATA ATTCAATGAACCATTCACAATAAAATGGCAAAAtcgattttttaaataat aactTGAAtagttttgtcatttttctctCTTTAAGATATATTAAATAGTC ATCACTTTGTTTCCATGCAATACATACAGATTGCCATTCAATGTATATTA ATCATAATCCATTTGAATAACAAAATCAGTTGAAACCAGTCTCTTTAAAA ATCGTGAATTCATTGCTTCCACGGCCTACAATGCTCTAAAACAGGCATAA AAATCTTAAATTGGACAATCAAACGGCGAAATCTTCATTACCTATTTTAT AAAGAAACGAGGAGAGACCGACTGAGTAACAACACTAGGCTAGGTGATTG AGTTATTGATTAAAGCTATTATATTAGTTTTATAAATACCTTACTATGCC CATTGAACTCTTTGGGGAAAGTGGTTAATGGGAACTCCAGTGAGCTCTTA CTAGATGTCGAACAACGAGaagtctaatttgttcgaatttatagaataat tcaaattatagaaagcacATTTCTAGCGTTCCACCTTTTAACGGTGATGG AAAATtatttcgaattaaagaaacattcgaataataaaagttcgaattag cgagactCCACTGTAGTGTTTACTTGCAAATCTTCTATACGCCTCCCCTT TAATGTAAGTTTCCTCCTGGGTCAGTCCCCCAGAAATTTAAGACTGATAA ATGTATGATACTTATCCCACCCcctaaaaatgaacaaaatccTTTTCCCA CGCCTTTTGTATTTTCCCACCcgagaaatgttgaaatttttctccccccc cccttctttTCCGGGCAATTAATTTTTATGCACCTTTGACATttacattg tacacaaaaatgTATCAACACTTCTACAAAAGATAACTGATTTTCCAGGA AGAAGAACATCTGCCAAAAAAAACTCCAAATGTGACAGAAGACTTTCTGT TAAAAAGTTCTCCCGccagaaaaatttatttgggggGAGGAAACTATAAT TACATTACTTTATTTTAATAGAACTTGGGAACCAGCTTGAAAATGCGCAG CACCGTTGTGAAACATTGGAAAAACAACTCGACTACATGCGTAAAATGAT GCAAACCCAAACAACAACAGCTGGAAATACGAAACCGCCCCTTTCTACAC CCACCACCCCGAACAACAGAAGGACATTTCATTCACCGCCGGCGACAAAT GATAGTGCCATCTTATCAAGATCTCCACGACAATCCACTGTTGTTGCCAG GTTTTACTTTATTAGGAATTTTGGTTGGCTACTTTTGATGACAAATCGCC GTTTAGCTTTTATTTtgtggattttgaaaaattgagtgTTATTCACGAAA TTTAGTCCCGATGAAAACTTTATAAGGTGTTAtctgtgaaatatttttga acaaagttccaaaaaaaaactgaaaaaagctcCAAAATCTTTATTCACAT CAAGAAAGCGTTAACAAATGTATTTCAATCAACCAGCCTGTGTAATTAAG CTCCCTCGATCTCATAAAATTTCGCGTAAAAATTAGACAGATCTCcaagt aaaaagaaaactaaGTATACTAAAAGTGCATATTGTTAACGAtattttgg acctaccccggtggggtggaggtcctacaaattaacctttgtccgttcgt tcgttattagctctcctcgtgattggctcattagttttttctgatttttt gcacaaatatgtgtaactataaaccctcgaatgtgacggagcccgatttt cgaaaaaaaaattttttgggccaattcgggccaaaaaacggctaaaaaac gggttttttggactttgtgaaaaattggatcattaactttttctgatttt ttgcatgaaagtagcgtaccatcataggtaaaagatggctcaagctgatt ttttcaaaaaaattttgtcggctcaaaaaatgcatgtttatctataagaa tcactatcaataagcatacatcaatgttcttagttaaattactcaatttt tttatgagatagatgtttcttttgctcatgagggcttacttttgaagagt gtgtgtgtttagacatgaaattttggttgtttggcgtgtttttatagaaa aactggccgaattcgatatttatttataagcacattatcaattacttagg tattagcttttctcggtattggctctttgattctttatgattttttgcac aaagatgcataactataaaccctcgaatgtgacggagtctgactttctta aaaaaaatttgggggcaaatttgggccaaaaaacggctaaaaaaccggtt ttttagaccttgtgaaaaattggatcattaactttttctgattttttgca tgaaagtagggtaccattataggtaaaagatggctcaagcagattttttc aaaaaaattttgttgactcaaaaaacgcatgtacatcaatgttcttaacc aaattactcaattttttgatgagaaagatgttttttgctcacaaagtctt gaatatgaaagaatatttcaagagcatgaaattttggtttttaaacgttt ttttttataagaaagaaacgactaattttaatagatcgtcactatttgtg ttctgaatgattgtttaatggtcacgctcacgtagatatcaattataaat atgTGTTagatgcataaccaggtaggtccgtaaaagtatcacttgtttct ccAAGAATCCAGGGGCTCGGCATATTGCCACATTTCACAACATACATATA AACATTTTCATCTGAAATGACATTGATCTTTCTACTATTCAGGTCACCAA CAAGAAGGATCCAATTGAGTGCTGTCCAGGAGTCACCAGCACTTGAGAAA CTGAACGGTCTTGAAAAAGAACATTTGAAATTGACAGCTTCCCAGTCACA AGCTGAGgtaaacatatttttttcattcaatgtaTTGTGGAAATTCAATT GGTTTCTGATAAAATTGCTCGTCTAGATCATAGTGCAGGAGGAGGTTCTT TCTCCAAACCTTGGAATCCCCAAACCTTGGAACCTCATCAAGGATTCTAG CTTTTCAACCCTAAAAAGTACTGTGCCTTTTGACAGCCTTCCACTCaaac aatattttaaatttccttACAATAGGAAATACATCGTAATTAGGACAGAT TACTTCtttgaaagtgaaaaaagtACGGAcaattattttaatattttgac tACCTCTGACAAGAAAGGGAATGGTTCGTGTCAATCCCATACCTTCCCGA ATGGCTCTTTTTTCTTACTACCCCTTTCTGACAATTTCTGTTCCCCTTAG GTTTTTTTAGATGTTGCCATCGCTTTTCGAAAATATTAGTAAAAAGCATG AAACAATTTTAAATCAGTCACGGCTCTGCGAAAGCACGTTTTAGCTCTTT ACCAACTTGGTCGATTTCGAAAAGGTTTTTTCAGTAACCTGCACATTCTG TCGAGCATTGGCTTCTTTTTTCATACAGAACAAAATTCGTCAATTAGAAG AGAAGATTCGAGAGGAAAGCCACTGTCGAAAATTGTTGGAAGATAAGGCT TATGAGGTAAAAATTTAAATCGTTAatactttttttcttaaaaagaatAG CGTGTCATTTCTTATTGCTGTGGACCTTTTTGAAAGTGTCATCCAAGTTG TTTATTATATTTACTTTCTAGCTAGAACAAGTTGTGGCGCAGGCAAATCT CATCGACCACAAAGATCCAACGCCGATAACGAACACCGGCTTGAAACCAA CGAAGACTGTAAAAAAGAAACGGAAGAAAAAGGTGTGAAATCTTCTGCCA ATACACGGGttacaaaattatatcaatgcagtgaaaacatgtgattactc gaaaaagttcacgtgattttatttccatattaCTTGCTTtgcaacttaca gctgataactttatatatgtcaataaaTTCAAACCAAgaagaaataaatg tcatgtaacaagcacataaaaatttcgagtaaaagcgtgatttgacttta attttgcaacctgtgtattgaactttttattggaTTAATCGAACAAAACA GGGTTCAGATCCAGATCTTAAAACGCTTGCAACCATGATTTTGAGCAATC GACATAGCCATAGCGATGTAAGATGGCGTGTCAAAGTCGTGTTTTAGTTG TCCCAAAAGTGACCCCTTTGTGCAAAATATTCAttgaaaaaaacagcaaa aacccTTTCATCCTCCTTTTAGTACCTGAGCAAAAGTTTCTACTTTTTCC AACATGTTACTTTTTCTTTCAGATCATCACAAAAGCACCGACCACAAGTT CTTCGTCCTCGACGACTCCGCGTTCACCACGGTGCCAATCAACGGGTCCT TCTACTAGTCCTAATAACCATTACCTACTCGACCTTAACAATATCCCTTT CGTCGTTGGCCAGGTATCGAAAGTTTTTGTTCACCGGTAGCGAGCCCTCA CTTCTTTTCGTTATGCATTTTTATTTCTTAATTGGCTTTGGTTATATAAT ATGAAGACAGAAACATAAAGAGCTGCTTGGCCTCTAATGATATTGTagtc aaaacatcaaatttaactaaaaaaagTACTTTTCGCTAGTGGTTCATGTC ATTAGACGTCATGTAAGAATTAAGGATTCAATGCTCTACTTTTAATCAAT CGcagataataaaaaaaacgaaaaaagtacAAACTAACAACCTTAATCAC ATATTTTCCAGTTATTATCTATCATGCTTCTCTTTTAGTCTACGTCTCGT TCTCACTCGGTCGGTGCAAACGTTCAGAACGTTCTTTCGATGATGAAATC ACACAGTAGACTTTGTGAGAGCGCTAATCACGCCAAGAAACCGAACACTT CGTCTGCAAGAAGCAAAAGGCCGACACCTCGAACGCCCAGATCACCAAAA AGCACGTCTGAACTGGAATTCTTATTACGTACTCTCAGCGAAGAGTTTGA AAAACTTGTCGAGTAAGAACAACTTCCCCAAAATTCTATCCAATGCATGT TAACTGCTagacaatttaattttttccattAATCATGTAGAAGGTCTACA AATGCTTTCAGGAAAATTCGATTTTATTTTGATCTCCATTTTTTGATGGA CATTTCTACACAAAAAGGAAAACTAAACCTCCGCATCCAAATGTGAATTT TAAAAGTTGATGGAAAATTTAGTTTCCGCTAACACCCTCTTAAATTTATT CATTCATCTTTTCATTCCGCTAACTCACtaattcattcaatttttaatgc attttttaCTCAGTCAGTCATTCGTTAATTTTAGGGAACATCGTCAACTT TCAGAACGGATCGAAGTTGAAGAAAACGAACTTTTACGACAAAGTGACGA AAAAGAACTTTCTCTGATTTATAATAAATTAGAATCGAAAGGTAAACAAA TATCCATGATTCGTGAAGTGCTCANGATAAATTAGAATCGAAGGGTAAGC AAATATCCATGATTCGTGAAGTGCTCAAGTCTTCACCCCAAAGTAAGGTT GCACCCACCGGAGCGTCCAAACAACATACGAGCGGTGGTAAATTAAGATT GGGGCCACAAGAAATTGAAGTTGTGACCACTATACGAGCGCCAACGAAAA CATCTACTGCAAGATCGGAAACGAAAGGTAACACGAACTTGGACCTGCTG AAAAAAGTCCGCAAATTACAATATACCTTACAAAAAGAAGATTTGAAATG ggattaaaatcttttttgttgGTTGATCAAGACATTAGGGAGAAATTTGC TTATGCTACTCATAGTTGATCGTCTTTGAGCAAGGCTGTTTTCAAAGTTC ATTAGACCTACTGGTTGTTTTGACCAATAAATACACTCATACATACATCA TTCACTAGTTGTTTTCCAGTATCTACTGTCTCCAGCTTTtaagtttttaa ctttcatttGCTTTTACTTTATTcgttttttgtgaaaatcgaaTTTCCTG AATTTAATTCGTTTTTGGCGCTGCAGCAATGTTAATGTTGCTTATCAATA GGCAACGTGTTtttaataaattcaaatttgttatttttcaatattgttTT AAAATGGAACAAAGTATTATTTATTAATTGTATAGTCAATACCAATAAAT GTGTAAATAACTACAAATCTACTTGACtatgcaaaatttctttcctttta gcTTATGGTCTTGAAATACAGAAGGGCCACAATAGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00015440TCONS_00015440Clytia hemisphaericatranscript
TCONS_00015441TCONS_00015441Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00015441-proteinTCONS_00015441-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000211supercontigsc0000211:306097..316332 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
CEP57centrosomal protein of 57 kDa isoform a Homo Sapiens
CEP57L1PREDICTED: centrosomal protein CEP57L1 isoform X5 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
13.42 11.66 4.81 3.9 19.53 17.63 10.04 11.75 6.85 8.23 7.79 5.1 4.3 4.28 6.38 8.28 9.23 8 3.46 3.29 3.75 3.26 10.61 10.02 17.72 15.6 2.44 1.07 6.34 7.05