TCONS_00015440 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015440
Unique NameTCONS_00015440
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2242

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015440 ID=TCONS_00015440|Name=TCONS_00015440|organism=Clytia hemisphaerica|type=transcript|length=2242bp
AAAAAAAGTAAAGCACACAAACAGAAATAAATGTTAAACAATGCAACGTT
CTCAAAATGATCAAAGTCCTGCAAAAATCGAGGAACTATACAGTTCAACG
CAGCAGAAATCTTTTGAGAGCATCATGAGAGTACCTTATCAACAAAAGCC
TCCCGTCTACACCAATGATGCACGCTCTATTGAATCACCTTACACTTCTT
TGGGTTCATGTCGTAGCTCTTACGCCAGTATTAAACCTAACAGTTACAGT
TCACTTCGCGCTCGTTCTTTGAAGGCTAATGCACAACACGAGAGTAAATC
AAAAGCCGTCATGCAAGCATTACAAAATTTGCAAGACAAGATAGGTGCGT
TGGAGGTGGACCGAGCAAAAGCAGAAAACAATTTGAAGAGTTTGACAGTG
GAAACAACAGAGTACAAAGaattattgaaacaaaaacatgACCTTTCCAC
CACGTCAACAGTTGGCAGCCCTTGTAGTTCAAAGCATGGCAGCCATACAG
AAGAACTTGGGAACCAGCTTGAAAATGCGCAGCACCGTTGTGAAACATTG
GAAAAACAACTCGACTACATGCGTAAAATGATGCAAACCCAAACAACAAC
AGCTGGAAATACGAAACCGCCCCTTTCTACACCCACCACCCCGAACAACA
GAAGGACATTTCATTCACCGCCGGCGACAAATGATAGTGCCATCTTATCA
AGATCTCCACGACAATCCACTGTTGTTGCCAGGTCACCAACAAGAAGGAT
CCAATTGAGTGCTGTCCAGGAGTCACCAGCACTTGAGAAACTGAACGGTC
TTGAAAAAGAACATTTGAAATTGACAGCTTCCCAGTCACAAGCTGAGAAC
AAAATTCGTCAATTAGAAGAGAAGATTCGAGAGGAAAGCCACTGTCGAAA
ATTGTTGGAAGATAAGGCTTATGAGCTAGAACAAGTTGTGGCGCAGGCAA
ATCTCATCGACCACAAAGATCCAACGCCGATAACGAACACCGGCTTGAAA
CCAACGAAGACTGTAAAAAAGAAACGGAAGAAAAAGATCATCACAAAAGC
ACCGACCACAAGTTCTTCGTCCTCGACGACTCCGCGTTCACCACGGTGCC
AATCAACGGGTCCTTCTACTAGTCCTAATAACCATTACCTACTCGACCTT
AACAATATCCCTTTCGTCGTTGGCCAGTCTACGTCTCGTTCTCACTCGGT
CGGTGCAAACGTTCAGAACGTTCTTTCGATGATGAAATCACACAGTAGAC
TTTGTGAGAGCGCTAATCACGCCAAGAAACCGAACACTTCGTCTGCAAGA
AGCAAAAGGCCGACACCTCGAACGCCCAGATCACCAAAAAGGAACATCGT
CAACTTTCAGAACGGATCGAAGTTGAAGAAAACGAACTTTTACGACAAAG
TGACGAAAAAGAACTTTCTCTGATTTATAATAAATTAGAATCGAAAGGTA
AACAAATATCCATGATTCGTGAAGTGCTCANGATAAATTAGAATCGAAGG
GTAAGCAAATATCCATGATTCGTGAAGTGCTCAAGTCTTCACCCCAAAGT
AAGGTTGCACCCACCGGAGCGTCCAAACAACATACGAGCGGTGGTAAATT
AAGATTGGGGCCACAAGAAATTGAAGTTGTGACCACTATACGAGCGCCAA
CGAAAACATCTACTGCAAGATCGGAAACGAAAGGTAACACGAACTTGGAC
CTGCTGAAAAAAGTCCGCAAATTACAATATACCTTACAAAAAGAAGATTT
GAAATGggattaaaatcttttttgttgGTTGATCAAGACATTAGGGAGAA
ATTTGCTTATGCTACTCATAGTTGATCGTCTTTGAGCAAGGCTGTTTTCA
AAGTTCATTAGACCTACTGGTTGTTTTGACCAATAAATACACTCATACAT
ACATCATTCACTAGTTGTTTTCCAGTATCTACTGTCTCCAGCTTTtaagt
ttttaactttcatttGCTTTTACTTTATTcgttttttgtgaaaatcgaaT
TTCCTGAATTTAATTCGTTTTTGGCGCTGCAGCAATGTTAATGTTGCTTA
TCAATAGGCAACGTGTTtttaataaattcaaatttgttatttttcaatat
tgttTTAAAATGGAACAAAGTATTATTTATTAATTGTATAGTCAATACCA
ATAAATGTGTAAATAACTACAAATCTACTTGACtatgcaaaatttctttc
cttttagcTTATGGTCTTGAAATACAGAAGGGCCACAATAGC
Run BLAST on NCBI

transcript from alignment at sc0000211:306097..316332+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015440 ID=TCONS_00015440|Name=TCONS_00015440|organism=Clytia hemisphaerica|type=transcript|length=10236bp|location=Sequence derived from alignment at sc0000211:306097..316332+ (Clytia hemisphaerica)
AAAAAAAGTAAAGCACACAAACAGAAATAAATGTTAAACAATGCAACGTT
CTCAAAATGTAAGTAGCAGACCCACTCGTACAAGACAAATCCCTGAACAG
TTTAGTTTCAACACCTGTCAATTATAGTTTCAAAAGATAATTTATTAATC
GAATCAATCACTAGAAGTTGAGCGTAAAATGGGCTATATAATAATACTTA
GaggattatttaaaaaattttcctgtaAGCCTTTGTTTACCTTTAAAGAT
atatcaatttctttttatacttttattAGGATCAAAGTCCTGCAAAAATC
GAGGAACTATACAGTTCAACGCAGCAGAAATCTTTTGAGAGCATCATGAG
AGTACCTTATCAACAAAAGCCTCCCGTCTACACCAATGATGCACGCTCTA
TTGAATCACCTTACACTTCTTTGGGTTCATGTCGTAGCTCTTACGCCAGT
ATTAAACCTAACAGTTACAGTTCACTTCGCGCTCGTTCTTTGAAGGCTAA
TGCACAACACGAGAGTAAATCAAAAGGTATTGTTTCATTAAGAGTTAAGA
TTCATTTCTGGAGTTTGAGTGTCaaatttttcgtgttttgattGGTAAAC
CTGACAGCATTTTAAAAAGGTTACTTAGATGCTACACTGTTATAAGAGAG
AAAACTGGATGAGTAAAATTGTCATTTGAAATATTCTGAAGATGCACAGC
TGGTTTTTGGCTAACCTTTGcgtattttcaatttaatttttaggTATTCC
AGCGTATTCATTAATTGCCTTTTGAAAACTTCTgtattatttttaataaa
aagaaagaatatgaCTCTCACTGATAAAAGTCTTAGTAGTAAACAAATCC
TTATATTCTATATGTTACAGCCGTCATGCAAGCATTACAAAATTTGCAAG
ACAAGATAGGTGCGTTGGAGGTGGACCGAGCAAAAGCAGAAAACAATTTG
AAGAGTTTGACAGTGGAAACAACAGAGTACAAAGaattattgaaacaaaa
acatgACCTTTCCACCACGTCAACAGTTGGCAGCCCTTGTAGTTCAAAGC
ATGGCAGCCATACAGAAGGTGAAAACCATTTTCAGATCTTACTTCCCATC
CTCTTTTAAGCTAGAATGGATATATGACAGTCAGTAAACAAACTTGAAAC
AACTAGATGACTAGAAAATTAATTAACAAAAGCtgcttttggttcatttt
ttaaaatttattttctaaacgTTTCGGCCTCAACAGAGTACCATCATCAG
TAAAAAATTTCGTTGTAATGAAAATTAGCTAGCTGTAAAATTTACAAGTT
TAAAagtcattttatgcttgagagggggccttgagacgtatgtactaaat
gctAAATCTAGTCTAAATtcggatcctaacctaagaatgctgtaagaata
tcttaagatgattttcccaaaaaagttaagaatatccatgatgaaatgga
tttacaccattcttataaaaaaagcgtgtattctgTTGAGGCCAAAAcgt
ttagaaaataaatttcaaaaaatgaaccaaaagcagcttctgttatttaa
tttttcacttAAGATGTATAGaaggattgatttatttgataGAGGATATT
TTCGCATTTGACTGAGATTCTTGATTCTGGGACGAAAgagcttttctttt
ttttttgcgccTTAATATTATTTAAATTTACCGAATTCAAACTCTAACCT
AGTTTCGGCTCCTTTAAGGGAACAATTCGTggcaagaaatattttcaaag
attccCCAAAGGGATTTTTGCCTATTACAAGTCCGGAGAaatcagttttg
atttttaaagtaaCAAAAGAGACAAACATAGTAATTCAATTCATTTATTG
GAGTGCATTTTTCAGGTCTACTGTTTCATTACAATCTCGTAAAATGTGGT
GTTGAACatataaattaataaattaaaCAAATTAAAAGTGGAATGTTTAC
TTCAACCTTCGaattagaaataaaaactttcaaaaatattttcacattGT
TACAACAAAATCTGTTTCGATAAAATTTGCTCACTGTACGGGTGCGTATG
GAAcgacttttttttttgacgatGTCAGTTTGACCATGTAGCGTCTGCTT
TCCAACTGCATCACGTGTCACCATTGGAATGATGAAGGTCGTACCAACAA
GAGGCTTTCTTTCAAGTTTTTATAGCCAACATTATTCTCATCAAACGATT
TCCATATGATCCCTTTTGTCGTGTAACCGTGGTAGTTTTTGTAGGGTCCG
TTCATTGCTACACGGTGACATTTTTCATGCCACCAAGCACCGTACCCTCT
AGCCGCGCAATTATGACCTGCTACATCATTATCAGAATCAATGGTAGTGA
ATTTCATTCCTCTCATCAAACGACCATAATCTACGGTAGAGAAGGTTGAA
TCAATATCTTCTTCTTCATAATTGATCTGGTACTTcatactttcactttc
gattctgACTTTGTGgattattttcctttttgtgaCACCGAAGAAATCGG
TGCCTCGTACAAGGTAGTCGTGGTGTTCTGACGTTGTCAACAAATGTAAC
AACTCATTACCGAGATAATACTCGCCTTCCGGATCACCAAAGCCATGTTT
GAACTCGGACCAGGTTCGGTCTAAGAATTTTACACTACCATCAAATCGAC
GCTGAAAGGCCATCCAACCGCCGCCAGCNATTAATAAATTAAACAAATTA
AAAGTGGAATGTTTACTTCAACCTTCGaattagaaataaaaactttcaaa
aatattttcacattGTTACAACAAAATCTGTTTCGATAAAATTTGCTCAC
TGTACGGGTGCGTATGGAAcgacttttttttttgacgatGTCAGTTTGAC
CATGTAGCGTCTGCTTTCCAACTGCATCACGTGTCACCATTGGAATGATG
AAGGTCGTACCAACAAGAGGCTTTCTTTCAAGTTTTTATAGCCAACATTA
TTCTCATCAAACGATTTCCATATGATCCCTTTTGTCGTGTAACCGTGGTA
GTTTTTGTAGGGTCCGTTCATTGCTACACGGTGACATTTTTCATGCCACC
AAGCACCGTACCCTCTAGCCGCGCAATTATGACCTGCTACATCATTATCA
GAATCAATGGTAGTGAATTTCATTCCTCTCATCAAACGACCATAATCTAC
GGTAGAGAAGGTTGAATCAATATCTTCTTCTTCATAATTGATCTGGTACT
TcatactttcactttcgattctgACTTTGTGgattattttcctttttgtg
aCACCGAAGAAATCGGTGCCTCGTACAAGGTAGTCGTGGTGTTCTGACGT
TGTCAACAAATGTAACAACTCATTACCAAGATAATACTCGCCTTCCGGAT
CACCAAAGCCATGTTTGAACTCGGACCAGGTTCGGTCTAAGAATTTTACA
CTACCATCAAATCGACGCTGAAAGGCCATCCAACCGCCGCCAGCTTGCTC
CATCAAACAATAAACCTTTCGTTTATATTTCCCCAAGATAATAACCTGAT
ACACTCCATCGTTTCTGTATCCTAATGTGTACCATTGAGCACAATCCTGG
GGAAAATCCACTGAATAATACTTTGTTCCTGGCTGAGTTCTCAATGCTCT
CGATTGATTCTGATAAGTACGAAAGAGAACATCGTAGAAATTACAATTGT
AGTACCTCGTGGCAGGCTTATAGTCGAACGAAAAACATTTGGGATCCAAT
GAACAAATACTAATGCATCTTTGAGATGGTGCCTCCTCGATTGATTTGTA
AGGTGTATAATCGATGCTCTTTCCCTCTGCTATCAAGTTGAATAGTTTAC
CGGcttcaagaaacttttttccaaagaaTAGCAAGAAAAATACGAATGCT
GTTAATTGCATCTCGTTTTTTCCcaattgtttctttctttttcaactcca
aattgtttttgttaagtTTTACTTTATTCGTTCTTATAATGgtcaatttg
aagaaaaaaaattgtttgaccAACAAAGCTTGAAAAGTTTTTCAGTAATG
TATAAAAATATCCCTTCAATAAAACAAATAGACATAGAAATTCATCGATA
ATTCAATGAACCATTCACAATAAAATGGCAAAAtcgattttttaaataat
aactTGAAtagttttgtcatttttctctCTTTAAGATATATTAAATAGTC
ATCACTTTGTTTCCATGCAATACATACAGATTGCCATTCAATGTATATTA
ATCATAATCCATTTGAATAACAAAATCAGTTGAAACCAGTCTCTTTAAAA
ATCGTGAATTCATTGCTTCCACGGCCTACAATGCTCTAAAACAGGCATAA
AAATCTTAAATTGGACAATCAAACGGCGAAATCTTCATTACCTATTTTAT
AAAGAAACGAGGAGAGACCGACTGAGTAACAACACTAGGCTAGGTGATTG
AGTTATTGATTAAAGCTATTATATTAGTTTTATAAATACCTTACTATGCC
CATTGAACTCTTTGGGGAAAGTGGTTAATGGGAACTCCAGTGAGCTCTTA
CTAGATGTCGAACAACGAGaagtctaatttgttcgaatttatagaataat
tcaaattatagaaagcacATTTCTAGCGTTCCACCTTTTAACGGTGATGG
AAAATtatttcgaattaaagaaacattcgaataataaaagttcgaattag
cgagactCCACTGTAGTGTTTACTTGCAAATCTTCTATACGCCTCCCCTT
TAATGTAAGTTTCCTCCTGGGTCAGTCCCCCAGAAATTTAAGACTGATAA
ATGTATGATACTTATCCCACCCcctaaaaatgaacaaaatccTTTTCCCA
CGCCTTTTGTATTTTCCCACCcgagaaatgttgaaatttttctccccccc
cccttctttTCCGGGCAATTAATTTTTATGCACCTTTGACATttacattg
tacacaaaaatgTATCAACACTTCTACAAAAGATAACTGATTTTCCAGGA
AGAAGAACATCTGCCAAAAAAAACTCCAAATGTGACAGAAGACTTTCTGT
TAAAAAGTTCTCCCGccagaaaaatttatttgggggGAGGAAACTATAAT
TACATTACTTTATTTTAATAGAACTTGGGAACCAGCTTGAAAATGCGCAG
CACCGTTGTGAAACATTGGAAAAACAACTCGACTACATGCGTAAAATGAT
GCAAACCCAAACAACAACAGCTGGAAATACGAAACCGCCCCTTTCTACAC
CCACCACCCCGAACAACAGAAGGACATTTCATTCACCGCCGGCGACAAAT
GATAGTGCCATCTTATCAAGATCTCCACGACAATCCACTGTTGTTGCCAG
GTTTTACTTTATTAGGAATTTTGGTTGGCTACTTTTGATGACAAATCGCC
GTTTAGCTTTTATTTtgtggattttgaaaaattgagtgTTATTCACGAAA
TTTAGTCCCGATGAAAACTTTATAAGGTGTTAtctgtgaaatatttttga
acaaagttccaaaaaaaaactgaaaaaagctcCAAAATCTTTATTCACAT
CAAGAAAGCGTTAACAAATGTATTTCAATCAACCAGCCTGTGTAATTAAG
CTCCCTCGATCTCATAAAATTTCGCGTAAAAATTAGACAGATCTCcaagt
aaaaagaaaactaaGTATACTAAAAGTGCATATTGTTAACGAtattttgg
acctaccccggtggggtggaggtcctacaaattaacctttgtccgttcgt
tcgttattagctctcctcgtgattggctcattagttttttctgatttttt
gcacaaatatgtgtaactataaaccctcgaatgtgacggagcccgatttt
cgaaaaaaaaattttttgggccaattcgggccaaaaaacggctaaaaaac
gggttttttggactttgtgaaaaattggatcattaactttttctgatttt
ttgcatgaaagtagcgtaccatcataggtaaaagatggctcaagctgatt
ttttcaaaaaaattttgtcggctcaaaaaatgcatgtttatctataagaa
tcactatcaataagcatacatcaatgttcttagttaaattactcaatttt
tttatgagatagatgtttcttttgctcatgagggcttacttttgaagagt
gtgtgtgtttagacatgaaattttggttgtttggcgtgtttttatagaaa
aactggccgaattcgatatttatttataagcacattatcaattacttagg
tattagcttttctcggtattggctctttgattctttatgattttttgcac
aaagatgcataactataaaccctcgaatgtgacggagtctgactttctta
aaaaaaatttgggggcaaatttgggccaaaaaacggctaaaaaaccggtt
ttttagaccttgtgaaaaattggatcattaactttttctgattttttgca
tgaaagtagggtaccattataggtaaaagatggctcaagcagattttttc
aaaaaaattttgttgactcaaaaaacgcatgtacatcaatgttcttaacc
aaattactcaattttttgatgagaaagatgttttttgctcacaaagtctt
gaatatgaaagaatatttcaagagcatgaaattttggtttttaaacgttt
ttttttataagaaagaaacgactaattttaatagatcgtcactatttgtg
ttctgaatgattgtttaatggtcacgctcacgtagatatcaattataaat
atgTGTTagatgcataaccaggtaggtccgtaaaagtatcacttgtttct
ccAAGAATCCAGGGGCTCGGCATATTGCCACATTTCACAACATACATATA
AACATTTTCATCTGAAATGACATTGATCTTTCTACTATTCAGGTCACCAA
CAAGAAGGATCCAATTGAGTGCTGTCCAGGAGTCACCAGCACTTGAGAAA
CTGAACGGTCTTGAAAAAGAACATTTGAAATTGACAGCTTCCCAGTCACA
AGCTGAGgtaaacatatttttttcattcaatgtaTTGTGGAAATTCAATT
GGTTTCTGATAAAATTGCTCGTCTAGATCATAGTGCAGGAGGAGGTTCTT
TCTCCAAACCTTGGAATCCCCAAACCTTGGAACCTCATCAAGGATTCTAG
CTTTTCAACCCTAAAAAGTACTGTGCCTTTTGACAGCCTTCCACTCaaac
aatattttaaatttccttACAATAGGAAATACATCGTAATTAGGACAGAT
TACTTCtttgaaagtgaaaaaagtACGGAcaattattttaatattttgac
tACCTCTGACAAGAAAGGGAATGGTTCGTGTCAATCCCATACCTTCCCGA
ATGGCTCTTTTTTCTTACTACCCCTTTCTGACAATTTCTGTTCCCCTTAG
GTTTTTTTAGATGTTGCCATCGCTTTTCGAAAATATTAGTAAAAAGCATG
AAACAATTTTAAATCAGTCACGGCTCTGCGAAAGCACGTTTTAGCTCTTT
ACCAACTTGGTCGATTTCGAAAAGGTTTTTTCAGTAACCTGCACATTCTG
TCGAGCATTGGCTTCTTTTTTCATACAGAACAAAATTCGTCAATTAGAAG
AGAAGATTCGAGAGGAAAGCCACTGTCGAAAATTGTTGGAAGATAAGGCT
TATGAGGTAAAAATTTAAATCGTTAatactttttttcttaaaaagaatAG
CGTGTCATTTCTTATTGCTGTGGACCTTTTTGAAAGTGTCATCCAAGTTG
TTTATTATATTTACTTTCTAGCTAGAACAAGTTGTGGCGCAGGCAAATCT
CATCGACCACAAAGATCCAACGCCGATAACGAACACCGGCTTGAAACCAA
CGAAGACTGTAAAAAAGAAACGGAAGAAAAAGGTGTGAAATCTTCTGCCA
ATACACGGGttacaaaattatatcaatgcagtgaaaacatgtgattactc
gaaaaagttcacgtgattttatttccatattaCTTGCTTtgcaacttaca
gctgataactttatatatgtcaataaaTTCAAACCAAgaagaaataaatg
tcatgtaacaagcacataaaaatttcgagtaaaagcgtgatttgacttta
attttgcaacctgtgtattgaactttttattggaTTAATCGAACAAAACA
GGGTTCAGATCCAGATCTTAAAACGCTTGCAACCATGATTTTGAGCAATC
GACATAGCCATAGCGATGTAAGATGGCGTGTCAAAGTCGTGTTTTAGTTG
TCCCAAAAGTGACCCCTTTGTGCAAAATATTCAttgaaaaaaacagcaaa
aacccTTTCATCCTCCTTTTAGTACCTGAGCAAAAGTTTCTACTTTTTCC
AACATGTTACTTTTTCTTTCAGATCATCACAAAAGCACCGACCACAAGTT
CTTCGTCCTCGACGACTCCGCGTTCACCACGGTGCCAATCAACGGGTCCT
TCTACTAGTCCTAATAACCATTACCTACTCGACCTTAACAATATCCCTTT
CGTCGTTGGCCAGGTATCGAAAGTTTTTGTTCACCGGTAGCGAGCCCTCA
CTTCTTTTCGTTATGCATTTTTATTTCTTAATTGGCTTTGGTTATATAAT
ATGAAGACAGAAACATAAAGAGCTGCTTGGCCTCTAATGATATTGTagtc
aaaacatcaaatttaactaaaaaaagTACTTTTCGCTAGTGGTTCATGTC
ATTAGACGTCATGTAAGAATTAAGGATTCAATGCTCTACTTTTAATCAAT
CGcagataataaaaaaaacgaaaaaagtacAAACTAACAACCTTAATCAC
ATATTTTCCAGTTATTATCTATCATGCTTCTCTTTTAGTCTACGTCTCGT
TCTCACTCGGTCGGTGCAAACGTTCAGAACGTTCTTTCGATGATGAAATC
ACACAGTAGACTTTGTGAGAGCGCTAATCACGCCAAGAAACCGAACACTT
CGTCTGCAAGAAGCAAAAGGCCGACACCTCGAACGCCCAGATCACCAAAA
AGCACGTCTGAACTGGAATTCTTATTACGTACTCTCAGCGAAGAGTTTGA
AAAACTTGTCGAGTAAGAACAACTTCCCCAAAATTCTATCCAATGCATGT
TAACTGCTagacaatttaattttttccattAATCATGTAGAAGGTCTACA
AATGCTTTCAGGAAAATTCGATTTTATTTTGATCTCCATTTTTTGATGGA
CATTTCTACACAAAAAGGAAAACTAAACCTCCGCATCCAAATGTGAATTT
TAAAAGTTGATGGAAAATTTAGTTTCCGCTAACACCCTCTTAAATTTATT
CATTCATCTTTTCATTCCGCTAACTCACtaattcattcaatttttaatgc
attttttaCTCAGTCAGTCATTCGTTAATTTTAGGGAACATCGTCAACTT
TCAGAACGGATCGAAGTTGAAGAAAACGAACTTTTACGACAAAGTGACGA
AAAAGAACTTTCTCTGATTTATAATAAATTAGAATCGAAAGGTAAACAAA
TATCCATGATTCGTGAAGTGCTCANGATAAATTAGAATCGAAGGGTAAGC
AAATATCCATGATTCGTGAAGTGCTCAAGTCTTCACCCCAAAGTAAGGTT
GCACCCACCGGAGCGTCCAAACAACATACGAGCGGTGGTAAATTAAGATT
GGGGCCACAAGAAATTGAAGTTGTGACCACTATACGAGCGCCAACGAAAA
CATCTACTGCAAGATCGGAAACGAAAGGTAACACGAACTTGGACCTGCTG
AAAAAAGTCCGCAAATTACAATATACCTTACAAAAAGAAGATTTGAAATG
ggattaaaatcttttttgttgGTTGATCAAGACATTAGGGAGAAATTTGC
TTATGCTACTCATAGTTGATCGTCTTTGAGCAAGGCTGTTTTCAAAGTTC
ATTAGACCTACTGGTTGTTTTGACCAATAAATACACTCATACATACATCA
TTCACTAGTTGTTTTCCAGTATCTACTGTCTCCAGCTTTtaagtttttaa
ctttcatttGCTTTTACTTTATTcgttttttgtgaaaatcgaaTTTCCTG
AATTTAATTCGTTTTTGGCGCTGCAGCAATGTTAATGTTGCTTATCAATA
GGCAACGTGTTtttaataaattcaaatttgttatttttcaatattgttTT
AAAATGGAACAAAGTATTATTTATTAATTGTATAGTCAATACCAATAAAT
GTGTAAATAACTACAAATCTACTTGACtatgcaaaatttctttcctttta
gcTTATGGTCTTGAAATACAGAAGGGCCACAATAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008621XLOC_008621Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015440-exon-sc0000211-1491911889:306097..306154TCONS_00015440-exon-sc0000211-1491911889:306097..306154Clytia hemisphaericaexon
TCONS_00015440-exon-sc0000211-1510915933:306097..306154TCONS_00015440-exon-sc0000211-1510915933:306097..306154Clytia hemisphaericaexon
TCONS_00015440-exon-sc0000211-1575043694:306097..306154TCONS_00015440-exon-sc0000211-1575043694:306097..306154Clytia hemisphaericaexon
TCONS_00015440-exon-sc0000211-1491911889:306376..306622TCONS_00015440-exon-sc0000211-1491911889:306376..306622Clytia hemisphaericaexon
TCONS_00015440-exon-sc0000211-1510915933:306376..306622TCONS_00015440-exon-sc0000211-1510915933:306376..306622Clytia hemisphaericaexon
TCONS_00015440-exon-sc0000211-1575043694:306376..306622TCONS_00015440-exon-sc0000211-1575043694:306376..306622Clytia hemisphaericaexon
TCONS_00015440-exon-sc0000211-1491911889:306967..307164TCONS_00015440-exon-sc0000211-1491911889:306967..307164Clytia hemisphaericaexon
TCONS_00015440-exon-sc0000211-1510915933:306967..307164TCONS_00015440-exon-sc0000211-1510915933:306967..307164Clytia hemisphaericaexon
TCONS_00015440-exon-sc0000211-1575043694:306967..307164TCONS_00015440-exon-sc0000211-1575043694:306967..307164Clytia hemisphaericaexon
TCONS_00015440-exon-sc0000211-1491911889:311168..311396TCONS_00015440-exon-sc0000211-1491911889:311168..311396Clytia hemisphaericaexon
TCONS_00015440-exon-sc0000211-1510915933:311168..311396TCONS_00015440-exon-sc0000211-1510915933:311168..311396Clytia hemisphaericaexon
TCONS_00015440-exon-sc0000211-1575043694:311168..311396TCONS_00015440-exon-sc0000211-1575043694:311168..311396Clytia hemisphaericaexon
TCONS_00015440-exon-sc0000211-1491911889:312939..313053TCONS_00015440-exon-sc0000211-1491911889:312939..313053Clytia hemisphaericaexon
TCONS_00015440-exon-sc0000211-1510915933:312939..313053TCONS_00015440-exon-sc0000211-1510915933:312939..313053Clytia hemisphaericaexon
TCONS_00015440-exon-sc0000211-1575043694:312939..313053TCONS_00015440-exon-sc0000211-1575043694:312939..313053Clytia hemisphaericaexon
TCONS_00015440-exon-sc0000211-1491911889:313625..313702TCONS_00015440-exon-sc0000211-1491911889:313625..313702Clytia hemisphaericaexon
TCONS_00015440-exon-sc0000211-1510915933:313625..313702TCONS_00015440-exon-sc0000211-1510915933:313625..313702Clytia hemisphaericaexon
TCONS_00015440-exon-sc0000211-1575043694:313625..313702TCONS_00015440-exon-sc0000211-1575043694:313625..313702Clytia hemisphaericaexon
TCONS_00015440-exon-sc0000211-1491911889:313818..313928TCONS_00015440-exon-sc0000211-1491911889:313818..313928Clytia hemisphaericaexon
TCONS_00015440-exon-sc0000211-1510915933:313818..313928TCONS_00015440-exon-sc0000211-1510915933:313818..313928Clytia hemisphaericaexon
TCONS_00015440-exon-sc0000211-1575043694:313818..313928TCONS_00015440-exon-sc0000211-1575043694:313818..313928Clytia hemisphaericaexon
TCONS_00015440-exon-sc0000211-1491911889:314419..314559TCONS_00015440-exon-sc0000211-1491911889:314419..314559Clytia hemisphaericaexon
TCONS_00015440-exon-sc0000211-1510915933:314419..314559TCONS_00015440-exon-sc0000211-1510915933:314419..314559Clytia hemisphaericaexon
TCONS_00015440-exon-sc0000211-1575043694:314419..314559TCONS_00015440-exon-sc0000211-1575043694:314419..314559Clytia hemisphaericaexon
TCONS_00015440-exon-sc0000211-1491911889:314885..315047TCONS_00015440-exon-sc0000211-1491911889:314885..315047Clytia hemisphaericaexon
TCONS_00015440-exon-sc0000211-1510915933:314885..315047TCONS_00015440-exon-sc0000211-1510915933:314885..315047Clytia hemisphaericaexon
TCONS_00015440-exon-sc0000211-1575043694:314885..315047TCONS_00015440-exon-sc0000211-1575043694:314885..315047Clytia hemisphaericaexon
TCONS_00015440-exon-sc0000211-1491911889:315431..316332TCONS_00015440-exon-sc0000211-1491911889:315431..316332Clytia hemisphaericaexon
TCONS_00015440-exon-sc0000211-1510915933:315431..316332TCONS_00015440-exon-sc0000211-1510915933:315431..316332Clytia hemisphaericaexon
TCONS_00015440-exon-sc0000211-1575043694:315431..316332TCONS_00015440-exon-sc0000211-1575043694:315431..316332Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000211supercontigsc0000211:306097..316332 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.58427	0.291684	0	0.504472	0.575779	0.444948	0.784042	0	0	0.373411	0.990014	0	0	0.165941	0	0	0	0	0	0.386606	0	0	0	0.303997	0.711066	0.895954	0	0	0.572148	0.806314
Blast
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BLAST of TCONS_00015440 vs. Swiss-Prot (Human)
Match: CEP57 (Centrosomal protein of 57 kDa OS=Homo sapiens GN=CEP57 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 4.084e-21
Identity = 88/266 (33.08%), Postives = 130/266 (48.87%), Query Frame = 2 
Query:  185 SPYTSLGSCRSSYASIKPNSYSSLRARSLKANAQH-ESKSKAVMQALQNLQDKIGALEVDRAKAENNLKSLTVETTEYKELLKQKHDLSTTSTVGSPCSSKHGSHTEELGNQLENAQHRCETLEKQLDYMRKMMQTQTTTAGNTKPPLSTPTTPNNRRTFHSPPATNDSAILSRSPRQSTVVARSPTRRIQLSAVQESPALEKLNGLEKEHLKLTASQSQAENKIRQLEEKIREESHCRKLLEDKAYELEQVVAQANLIDHKDPTP 979
            SPY         Y S KP   S LR    K    + ES S+A+  AL+NLQDKI  LE++R +AE ++K+L+ ET EYK++L ++      S       ++   H +EL +QL  A+++C  LEKQL+YMR M++                                  A + R+      V+    R+   + VQ    LEKL+ LE+E+ KLT  Q+ AE K+++LE K+ EE   RK ++ KA EL+  +    LI     TP
Sbjct:   34 SPYVV-------YPSDKPFLNSDLRRSPSKPTLAYPESNSRAIFSALKNLQDKIRRLELERIQAEESVKTLSRETIEYKKVLDEQIQERENS------KNEESKHNQELTSQLLAAENKCNLLEKQLEYMRNMIK---------------------------------HAEMERTSVLEKQVSLERERQHDQTHVQ--SQLEKLDLLEQEYNKLTTMQALAEKKMQELEAKLHEEEQERKRMQAKAAELQTGLETNRLIFEDKATP 251
The following BLAST results are available for this feature:
BLAST of TCONS_00015440 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CEP574.084e-2133.08Centrosomal protein of 57 kDa OS=Homo sapiens GN=C... [more]
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