TCONS_00015441-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00015441-protein
Unique NameTCONS_00015441-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length503

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00015441-protein ID=TCONS_00015441-protein|Name=TCONS_00015441-protein|organism=Clytia hemisphaerica|type=polypeptide|length=503bp
MQRSQNDQSPAKIEELYSSTQQKSFESIMRVPYQQKPPVYTNDARSIESP
YTSLGSCRSSYASIKPNSYSSLRARSLKANAQHESKSKAVMQALQNLQDK
IGALEVDRAKAENNLKSLTVETTEYKELLKQKHDLSTTSTVGSPCSSKHG
SHTEELGNQLENAQHRCETLEKQLDYMRKMMQTQTTTAGNTKPPLSTPTT
PNNRRTFHSPPATNDSAILSRSPRQSTVVARSPTRRIQLSAVQESPALEK
LNGLEKEHLKLTASQSQAENKIRQLEEKIREESHCRKLLEDKAYELEQVV
AQANLIDHKDPTPITNTGLKPTKTVKKKRKKKIITKAPTTSSSSSTTPRS
PRCQSTGPSTSPNNHYLLDLNNIPFVVGQSTSRSHSVGANVQNVLSMMKS
HSRLCESANHAKKPNTSSARSKRPTPRTPRSPKSTSELEFLLRTLSEEFE
KLVEEHRQLSERIEVEENELLRQSDEKELSLIYNKLESKGKQISMIREVL
XIN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008621XLOC_008621Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00015441TCONS_00015441Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025913Cep57_CLD
Vocabulary: Molecular Function
TermDefinition
GO:0042802identical protein binding
GO:0043015gamma-tubulin binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0043015 gamma-tubulin binding
molecular_function GO:0042802 identical protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 442..476
NoneNo IPR availableCOILSCoilCoilcoord: 251..292
NoneNo IPR availableCOILSCoilCoilcoord: 80..128
NoneNo IPR availableCOILSCoilCoilcoord: 153..180
NoneNo IPR availableGENE3D1.10.287.160coord: 248..463
e-value: 0.13
score: 12.1
NoneNo IPR availableGENE3D1.10.287.510coord: 80..188
e-value: 4.1E-4
score: 20.1
IPR025913Cep57 centrosome localisation domainPFAMPF14073Cep57_CLDcoord: 238..301
e-value: 8.7E-16
score: 58.4
coord: 89..186
e-value: 2.9E-26
score: 92.5

Blast
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BLAST of TCONS_00015441-protein vs. Swiss-Prot (Human)
Match: CEP57 (Centrosomal protein of 57 kDa OS=Homo sapiens GN=CEP57 PE=1 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 7.181e-41
Identity = 148/456 (32.46%), Postives = 222/456 (48.68%), Query Frame = 0 
Query:   49 SPYTSLGSCRSSYASIKPNSYSSLRARSLKANAQH-ESKSKAVMQALQNLQDKIGALEVDRAKAENNLKSLTVETTEYKELLKQKHDLSTTSTVGSPCSSKHGSHTEELGNQLENAQHRCETLEKQLDYMRKMMQTQTTTAGNTKPPLSTPTTPNNRRTFHSPPATNDSAILSRSPRQSTVVARSPTRRIQLSAVQESPALEKLNGLEKEHLKLTASQSQAENKIRQLEEKIREESHCRKLLEDKAYELEQVVAQANLIDHKDPTPITNTGLKPTKTVKKKRKKKIITKAPTTSSSSSTTPRSPRCQSTGPSTSPNNHYLLDLNNIPFVVGQSTSRSHSVGANVQNVLSMMKSHS------RLCESANHAKKPNTSSARSKRPTPRTPRSPKSTSELEFLLRTLSEEFEKLVEEHRQLSERIEVEENELLRQSDEKELSLIYNKLESKGKQISMIR 497
            SPY         Y S KP   S LR    K    + ES S+A+  AL+NLQDKI  LE++R +AE ++K+L+ ET EYK++L ++      S       ++   H +EL +QL  A+++C  LEKQL+YMR M++                                  A + R+      V+    R+   + VQ    LEKL+ LE+E+ KLT  Q+ AE K+++LE K+ EE   RK ++ KA EL+  +    LI     TP              +R KK  +K P   SS +     P             HY L L ++PFV G+STS SH+V ANVQ VL +MK HS      R+  S   AK+ ++   +SK+ +   P S     EL  +L+TL +EF ++  +H+QL++ I+      L+   E EL  +  ++E+K  QI+ +R
Sbjct:   34 SPYVV-------YPSDKPFLNSDLRRSPSKPTLAYPESNSRAIFSALKNLQDKIRRLELERIQAEESVKTLSRETIEYKKVLDEQIQERENS------KNEESKHNQELTSQLLAAENKCNLLEKQLEYMRNMIK---------------------------------HAEMERTSVLEKQVSLERERQHDQTHVQSQ--LEKLDLLEQEYNKLTTMQALAEKKMQELEAKLHEEEQERKRMQAKAAELQTGLETNRLIFEDKATPCVPNA---------RRIKKKKSKPPEKKSSRNYFGAQP-------------HYRLCLGDMPFVAGKSTSPSHAVVANVQLVLHLMKQHSKALCNDRVINSIPLAKQVSSRGGKSKKLSVTPPSSNGINEELSEVLQTLQDEFGQMSFDHQQLAKLIQESPTVELKDKLECELEALVGRMEAKANQITKVR 419
The following BLAST results are available for this feature:
BLAST of TCONS_00015441-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CEP577.181e-4132.46Centrosomal protein of 57 kDa OS=Homo sapiens GN=C... [more]
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