XLOC_008416 (gene) - C. hemisphaerica

Overview
NameXLOC_008416
Unique NameXLOC_008416
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000203:294901..302521+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008416 ID=XLOC_008416|Name=XLOC_008416|organism=Clytia hemisphaerica|type=gene|length=7621bp|location=Sequence derived from alignment at sc0000203:294901..302521+ (Clytia hemisphaerica)
CTGTAGCATTATGTCTCTTTTGATCGTAAAAATATAGGAATATAAAGTCA CGTATGTAACACTCGGAATTGTCGGAATGCGGGTCGGAATGCCAAAGACT ACTggtattttgattgatttgagtGGAACAATCCATATAGGAGATAAACT CATTGGAAAAAGCAAAGAAGCGATCCAAAAGTAagacctttttatttttg ttacagACGAATATTGACTAATAAGTGTCTGACACTTATTATAGATTAGC TCGACGAAATTTATTTAAGGTCTGGCCCGAATGTTTGACTGCTGAAATCA AACGAATAAAGTGGGAGATACTAAAAAAACCTCCCACAAAATTATAATAT CAAAGAATTTAGGGAAGTAACATTTTGTTGATTTGGCGCTCGATAAAACT TTGGCGGGAAAACATGGTGAACGCACGATGTGCGCGTTATTTTTTTTCGC GACAAAACCCCTGTCAggatagtctagcaagctagacaacTAATTCAGag attcagacatagtagaaataaagcaaaaagtaacggagggaacaatttta tacaaactaaattctGTAACAATATAATCATCATCATAATAACGCCTTAT ATGTGATTGATGTATATTTACACGCATTAATATAAactaaacgactccag tctactgtCAGCCcgagggggggggcactcgtatgatctggcctacgtca tgtgccgcgcttaagggtgggattttcccaagcttcttcttttATGCAGA TTTACAGCCGAgaagaaatatagtgcactataagggttgggtaaatcacg agaaaatgcactgaaagggtaccttttcagccatattgaactgcactgta agggtacgattttgaaaagcagattttgcgcggcacataccgtcgtttcg aaatcgaatGCCCCCCCCGGAACTGTCAGGACAACTCGGGAAAAGTAATA GtaaaattgcgtgatatcgtgatcagagtttcCTTGGGAGCCTCTgataa tgaaaagaaaacaggaCTTATTCTTCTGAATTGCGTCCATTCAGTTGTGT TGTATTCCTCATATGAGAATTGATTTGTATATTTAAAGTGGCTGAGCTTA GTAGTTACTTTTCCACTCAGGATTGGTTCATACCTCTAGTTCAGTGAGAA GAAGGAAAGGTGGCGGCTCTAACTGGTGTGATAAGGTGTTTTTCAAAGAA CGAAACCAACATTGTTACCAACATTTGCAgtaaataccctagaatttcag cccactgaaatttaatgtttaataATTGtattccaaaaccatccccactg aattttttaaccttggaacaatagaatttctatcccttTNaaattgtact ccaaaaccatccccactgaatttttaaccttggaacaatagaatttctat cccttTTGGGATTTCAGTAGGAATTTTAATCCCCGATAAGAAAAAAagtc ccaccggggctgtgagacaggggtgtagtaaACAAAGTAACTCTGAAATA TTAGAAATAAATGTTTTTCATCCCAACTTCTTGTTAAACTAACACCAACT CGATTGACATGGCGATGTTTAAGGTTTTAACTAGTGAAATTACTTACCAT TCCTCTAATTTAGTGCGACCgattaaataattattttgaaggaGCCTTAC TAATTTTGAATCTGCTACTACAAAAGAATTATAGGAAATTTGTTGGGGAA ACTCCACACTAAATTAGATGAAGATCGATAAAAAGTACCTGTACTAATAT TCAGAGGAAAATAATCAAGaagagctttcaaaataaaacatacgTAATAT AGGGGATGAAGATGATTTTCGAATTTTATCAGGAAATCTTTGTCAAAATA TCAAAAGGcgttttttttacagaattctcattttactcattttaatattt catgaaaaatactaaaaatcgTTTTTCGTTGACAATAAATGGCGCCTTCC ATCTATACTCGTCGATTTGAACTAAATCATTATGTAGAGTGTTATCATGA GGATGTAACAGTCGTTTCAGTTTCAAATTTTCCGCTCGCCACTCATCCGC ACTGCCATGACCATCATAAAGACCTACATAATGTCGAATGTCAATAACTG GCTTTTTGTATGGAAAAGACCATGTATTTAAAATCTTAATaatcaaaatg tttttgctAGTGTTCATGATACAGCTGAATAATGACACATCAACTCCACA TCTGAGTTCTTCTAACATTTCAGCATACCAAGAAGCATAGCCTggacatt tgaaaatttctaatgtGAAACCGGACCCTGTATTGGCCAAATGAATTAAT TTCATAAACCTATTGGAAGACTCTTCTTCCccactttttctttttaatgg atCATCTCTCACTGGCTCGTTTTCCTCTTCTGAGTCGAATCTACGGTCGA AAAACCAAACCTTCCTCTGTTGCGACTCTTGCTTCACATTATTTTTTGGT GGAGTAGCACATGATGATAATTTATCATCACCAATTTGAGTTTTGTTCAA TTTCTCAACCAAtgtgacattttctttttcaattttcaacatcttttctt CAAGATGGCTCAATCTCTCTTTCAAAGCAGTATTTTCATTTACTACTTTT AATCTTTCATCCTGCAAAGTCGTATGTTCAATTTTCAAGTCCTTTAATTC GTTTTGCACTTTTAAAAGAGCAACTTCAGATTTTAAGTTTTGCATTTTAT GTTCacctttcaatttttcgattgtCCATTGAAGTCCTGCATTTTGGATT TTGTAATCAACTCTGTCATTTGTATTTAATACCGTATTAAATTGGTCAAG GTGTTCATTCTGTCCAGTTTGATCATCCAATGTAAATCGTTTAAAAGCGT CATTTCCAGATTCTCCAAACTGGCTTTTATCATTGAATCTATTAGCTTTT GCCATACCTTTCCATAAAGACTATCAACCTTAAACACTAATAAATCTAAT ACAAATCGAATCTTTATCTCTTCATTTGATATTGTCTATTTGAGATTTAA CTCTAAAAAAATGTACCATCATGGAAAATTTGTTGCCTTTTAAAACTATC ACTTTCTCCTTAGTAGAGGAAAAAATGATCActgcatcaaaataaacagt aATATAAAACCAAGAATTGTTCTCGAATTTAATGTATTGTTTTCGCACAG CAAGATTTTGTCATTATAAACAAAATGTTTGATGCTTTTATTTGGTCtac aatataaacaaaacaacgaaaaaaacttttatacgAACACTGGTgatgtt acacgctttttttttataagaatggtgtaaatccattaatatgatcatgg atattcttaacttttttgggaaaatcatcctaaaatattgttacagcatt cttaggttaggatcctaattcagactagatttaacatttagtacatgcGT CTCTCTTAAATGGtatttgtgaaaggagtgagccttatttgggggtaatt gataatttataattgaaaatgctctaaaaattgcattcttagcttcagtt gtcaaattccatgatggtggtattcttagcatattcttaattttttggcc attctcatcatggacattctttgccaccggaggaagcctaaagcttctga ggatggcattcatagcttcacgcataaggaagttgggcaaacatctcata attttgcgcgcgtttttcagtatttNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNttctgggaaattccctttttataccacaagtagttattaagcgctct tcataggttaaaaatattactctacttaaagtattcgaacagttatgttg ctaaacgcGTGCATTAGTTAAATAACGGCCGTAGCggccgtagtacagtg gtagtgcatccggctacggttcgcaaggttgtgggttcaacccccagccg ggtcataccaaagattcccaaaatggtacttgatgcctctctgcttgatg ctcagNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNcccctaccttcgggtagatag ctatcgaaagaggagccttcggttcgcctccgactgcggtcgcagactta cttacttactagataacatatgaagagcagtatctttagatatatatacg ctttttataggaaaaaacaGTAAGTCATACGATTCTGGCTGGactgctct taaatttatatgagtttttcagccttaaatgtcaatattaattaaagcgg aaacatgtacttctcagtaatttctgaaatctgagtttcagattcttctt aatttgttcttaggttttggccaaatttcaaccTCGTattattatgaaat tgtttttataaaaaacgtgtaagacaaggcacagatgtcactctaagtag actgtaaatcactcccttgacacatttgttagcatttgaaaaaattttgt ctcagatgagaggtcactcttaacaaaaattactgtagggctaagatcat tccttttggacgcaaattcaactctatgtgttcgttttgctgcggtggca ccttaatgaaagttatggctagtataaagtgtattcttataaaataagcg TGTACTTTATTACCTGCTAAATACTTATGCTGCTTGGAAGTCAGTCAAAA TTCGAAGCAGTAAAAGATGAAAGAAAAGTCATGCAATAAAATGATCAACA CTTTAAAGGAATCCCCTTCCTCAAGGATAAACATAGGCTAAACACCTCAC AGATAAGAGGAAAGTTTTGTCCGAGAATGttctttaatgggataaatttt cgcaggGATTAGATTCCGCGGATTTTGGTGTCGTTCGCAAAaagtcccaa tggaaaattTCTTGAACAGAACTCAAAACATGTCAGATGATTACTTTTAA AATGTTAACTGGCAttaaagaagcgctaataatgcgtatttcaacaacca gtatgtataatttggcagtaaaaagacacaaaatcaTACAAATTCTAATT AATTAAAAGTCAATGAACTGATGATCACTATATCAGGAAATACAGAGATG GACATAAAAAATCTACCAAGACAAATTTGCGTAAATTCGTAAAGCAGTTT GGACATTCTTTTTGTAGTGGATATTTTCCCTTTCTTTTCTTCACAGGCTA AACAATGCCCAACTACCATACATGTTTGTCTCAAACACAACCAAAGAATC GAAAAACAGCTTACATACACGTCTCAACAAGCTTGGTTTAAACATTCCCA AAGAAAAGATCTTCACATCACTCACAGCTACATATGATTACTTAGCACGG AATAGTTTACGTCCGTACAGCCTCTTATCGAAAGATGCTTTGCTTGATTT TGAAGACCTCCCGAAGGAGGATCCGAACTGTGTGGTGATTGGATTAGCTC CTGAAATGTTCTCGTATGAAGAAATGAACAAAGCATTTCAGTAAGTCGTT TTTTAGATAGGCTGTGAGTTGTAGACTCCACAAAGTATTCCCAGTTCTTG AAACGATTCgccagaaaaaaaatcttttttatgggCTTATACAATGAATT ATCGATCCAGAACTAGGATCTTGATCATATAGTTAAGGTAAGGGAAACCC GTTTGGAAGTTTGGACCTTTCCTTTAACAGtggttttaaaatctttaaat gtTTCTCTTTATTTCAGGCATGTTTTAAATGGTTGTCAAATCATTGCAGC ACACAAAGCACGTTATTATCCAGCTAAAGATGAAGTCCTACGACTAGGCC CTGGACCCTTCGTATCAGCCTTAGAATATGCTTGCAGTAAAGAGGCTAAA GTCATTGGCAAACCATCTCCAAACTTCTTTCAATCAGCTCTGGATATTTT GGGGAATCCAGATGTCAGTTACATGATTGGTGATGTATGTTTGGAAATTC AAATAATTATTCCAGAAATATCTTTTcaagtaccttaaaggaagaaattt tggcgggaatttaatttggcggatgaccgAATAGTTTTTTCAGAgcgaat ttaatttggcggatggctggGAAAATTAAATTcggagggaatttaatttg gcggatggaggaaaaagtaaattttggtagaaacttaatttggcggattt tggctaaatccgccaaaatctcttcctttaaggtagattGGTAGCTTGAA CAACAATAAAATCTGTTATGAAAACTAGATTAGTGAAAGCGAAAAACCCT CAACTATTTCTCCAGTTTTATGACTAGTAATATGTAGGGTCAGCAATTCG GAAAGTGCATCGAGGAGTAAATTATAGAATGAAATATGATACTTACAACA AAAACTTGACCAAAACCTTTTCTTATGGTACCCAGTCCTGTCGATCCTGT AACCAGATTCTTTATCCAAAACAATACGATTATTTGGTTTGCCCGTTtca tttttgaattctatttatAATCCTGAAATATAGAAATAAGGACTTACAAT CTAAAATGCTCATACTCATTttatcaagtgtgcaaaagacGACATTGAAG GTTCGCAAAGAATGGGTATCCATGGTATCCTTGTTAAAACAGGTAGGTAC CAAAGATGACTGGCCCCAGCAatagacattttcataaattacgtcacgaa caccacttgcctcgtattcaaacaattaccaccATGGTAattatatccct tgagacattaaatgacttttttatgaatagaaagtagtaataaaatccgc tgggagtaaGTCACCCTGGCAATAATTTcgaaacgaggcaagtgatgttc gtgaggtaatttatgaaaagatctcTATTACTTTTCAGAAGGCACCCTCT AACCAACCACAAGATTCTTTTCCAAAAAGTGTCACAACCTTTCATTTACC TTCAGTCTTTTCTTTCTAAAAATTAGTAAAACGCGTTCTAAAATCTTCTA AGAATTTACGTATTGTGGTGGAGCCTCTAATTGGCGGATATCATCGGGGA AACGTGTACTGGATTTTGAAATTAGGTCTAAAGCCCTTAATATAGGGATA CTTATCAGAGGTgaccgccttttagagtgtctaTCAATTAGAAGTTTTAC TGCAAATTCAGATCATTAttaacaatttaatttttttttcttaggcAAAT ATCAAACAGGCGATGAAGACAGTTCGGAAAAGAAGCCACATTTCGTTGCA GAGGATTTCAGTGAAGCTGTTGAATTTATATTAAATCAAAAGatgtaaaa ttttataaaaaccaagCTATCCAATTCCTTGTCATATAGATATTATTTAC AATAATCTTAGTTAATACTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00015040TCONS_00015040Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00015040-proteinTCONS_00015040-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000203supercontigsc0000203:294901..302521 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
HDHD2haloacid dehalogenase-like hydrolase domain-containing protein 2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.05 0 0.06 0 1.65 1.15 1.77 1.18 1.7 2.97 1.49 2.55 4.11 2.85 0.31 0.06 0.04 0.38 0.26 0.27 0.81 0.42 0.11 0.41 3.42 4.37 0 0.29 0.05 0.17