XLOC_008212 (gene) - C. hemisphaerica

Overview
NameXLOC_008212
Unique NameXLOC_008212
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000197:5505..10564+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008212 ID=XLOC_008212|Name=XLOC_008212|organism=Clytia hemisphaerica|type=gene|length=5060bp|location=Sequence derived from alignment at sc0000197:5505..10564+ (Clytia hemisphaerica)
CTTTTTCAGCCGTTTATGATTGCAGATTCCAAATCACACCAGTCTcaata aactaaaatttgaaCATAAATAAGTTACAAAGGTCCATGCCTCATTTTAT TTAGggcaaaaatctcaattttttagtgttaggttgagaaatcaaatccg tttaaaagtcttctatatagtttatACTTTCTTTTACAGATTTAAAATAA TTAAAGTACAATTATGGCACATTGGTTTCATAGAAATCCATTAAAAGCGT CAAAAACGCAAGATTTTGATGGTTTAAAGAAAATTGCTAAAACTCCACCA GCAGCAAAGATTTGTGGGTAAGACTTCTTTAGAAAATCCGATCAATTTCT TGGATAAATACTTCACTTTTAGTAATACCAATAATTTATGTTTAATCCTC TGTGTATATTTTTCTGTATTAAATTTGTCAGGTGTATACAGGTATATGCT TTATTAAACATCATTATTTTTTCAGAGATCTGCGAGTATATCGAGTGAAA GCACTTCAACAATTGCAAGATCCTAGAAACGCTGTTGAGCAGGTGGAGAA AACAGTCAACGAGTATCTCTCATTATTCTGGGGTTTACTTGAGGATGTCA AAGGGCCAGTTAAAGAGGGAGAAAGTGCTCCTCCAACTTCAGCATCAGGG GAAGCCAAATTACAGAAGATTGAAACTTTTAAATGGAGCCATTCTATATG TGGTAACACTGCAATGTATGCGTAATTTTAATTaagatttttgaactttg tttctttgattttatgaattttatatAACTTAAGGTTAATGTTTACTTCA CATCACTTCCTGTTTCATTTGAGCATAGCTGAAAAAAATCCACCACTATA TAATTTGATACAGGCTTCCAAATGCTACATtctcttgttttgttttgttt tgtttcNTCATTTGAGCATAGCAGAAAAAAGTCCACCACTATATGATTTG ATACAGGCTTCCAAATGCtacattttcttgttttgttttgtttcagtGCT GTTCCTGATGCCAATTACGAATTAGCCTCTGTGTTGACAGAGTTGGCTTT GTGGTATACCAAACGTGCCTCTTATCTCTCTTCGAATGAAAAGTGAGCAA TCAATaaccaatttttttctttcttaatatCATAATTGAGCTCATTCATG CGCCTCCCAAATTTATgataaattgaagaaaaaaaataattgaaacataa aaaagccATAAGATGTCTAACCAAATTAAATGGAAATATGACACATTTTT TTAACTATATTTCGATCCTTACATGTTAAGTTCTTctttatcatttaaaa aaattaacatataAAGTTCTGTGTCCGGAAATTTTACGACTACATACAAT TCATTCTAATTGCtcattttcaatatatttaTCTTTCAATTTGATTAATT TCAGTTTGTCTGACGAAGAGGCGAAAGAGGTATTCAAAAGCTTAAGACAA GCTGCTGGTATATTCATGCAAGCAAAGGTATGGGTTTCATGGTTATTGTA CCTTTCTCGATTTTGTTTTCGATAAGATATGATGAACTGAcgaccaattt tttttaaaggaacTTAATGGAAAGGaaaatttaacaaatattttttatct tcatttttagaacatCTGTGAAAGTAAACTAGGAACAGGGCTGGTGGAGA AACACAGCGATGCGGATCCACGCGTTCTTGATGCTTACCATCTCCAATGT TTAGCAGAAGCTCAAGAAGGTACTTTTTTTATATGatgaaatttatttaa aatcttaatTTATCTCATCAACATTCATGATAACCGTTAATGTGTAATTC CCTAAAACTTCCAGGGATAGACTCTCTTCTACTTTCACTCATATACCTTA GAATCTCTATTTTTCAAGACGGTTACGGTTACGGTTTACGAAGTGTTTTG TTGAGAAGTTTCAAAATCTGAATTGAATTTATTTGACGCATTTCTTTCAT AGTAACGGTAGCGAGAGCAGTGGAATTAAAACACAAATCGACAACCATCA CAGCTGTCGCACTGGGAACAAGTAGCTTATTTTCCAAAGCAGGTATTCAA ACGGAAACAATTTGTTAGATTTAGTAGTGTTATTCTCTCAGTGCCACGGG TTATAGCATAACTTTGCAGTTTTGTAAAGGTTTGAACTTACTGACACTGT ATAACTTCAGACCGAAAAAGTCTGCATTAGTGTAAGGATTAGgggtattt aatttttttacaaatagaTTCCTCGTAAAACTCGGCAGAGGTACTCTTGC TTGTTCTTGTGATAAAGGATTCACCTTTCTCCTTCAGACGATTCATTAAG AAGCATCGATGCTGCCAAATCTGGAAAATGGAGACgttatttacaaataa aaaagaaCATCTACTTGGCATATGTAAGCCCACCTTACACCTGACAACAT ATAATTAATTATTACATCCCGTTTTTTGAACCCCTAATTGAACCCCTAAT TGAACCCCTCAGTTTAGCAATCACTGTCAAGggtttcattttaaagtttt actttttttaagatTCAATCGTAGATGCTCGTTGAGGAATCGTGCTCTGA GCTGATTTTCGTCCCTGCTGGTTTATCTCAAAACCAAAATGATGAAAGAT GCAGCTTCCCGATTCAAATAGTTATGCCTCTATTTCCCTTACCTGAATgc ttttgctttctttctcaaTCATAGGCGCACAGTTTCAAAGGCGAAACGCT TTTAGCAGAAGATCAATGTGGAAATGCAATCAGATCACTCCAAGAGGCTG ACAAATGTATAACATCATTCCCATTCCTTTTTTTCTAATGTCTTCAAATA TTCTTTGAATCGTTTAGGATTCGGGAGATCATCATAATTTTAACGTTTAT TCCAagtggaggggggggggggggcggggacttttaaatccaatttttga gaaGAAAATTTAACTCAGCCTAAACTGAAGCTTCGCCCTCGCTAATTTTA CAGTATTGAAGAGGCTAAAGCTGCATTACCCTCCTCGATTGGCCAAGTTG ATGAAACCCTTGTTTAAGCTGCTGGTGTTCCCTTTACAAAAGCTGATTGA CTTCGTTCAGTTGATATAACTGGTTAAGAGTATACCAAGATAATTACAAC GACAATAGACTACTTTTGGGTGCCtgcctaatagccgcccccccctCCCT CCACTAattaattttccgaaaattttccacccaggacattcttactCCAA CCCCcagcttattaatttttgggaaaatgtttttgaaagctccctctttt gtcttaattctgctgtattagcctcctttaaAAAAATAGGTACCCGAGGG TAGTCacaatacgaaatttgattggttgggACTCGCTAgtctattacatt tttcgtccgtcgtcgtgattatacAGATTTACTTAATCTCACTAATATAT ATTATTAACCTACAAAGCTGCTTGCCTTTTGTCATGCAGGTTACAAGCTT GCAGGTCAACTATGCAAAGAATATGCATCTACGAAGGGGCCTGGAAAATC TGCTCGACCGGACGCTCATCAGTTTTTTCGAAGACTGGGACCGATCGTTC ATCAACGATTGGAAAAAGCCACTCATGAAAATGGATTTATGTAAGTTTAT AACGATTGTTGTACTTGTTATAACAAGTCCGGTTTAAAATTAAAAGATCA ATCGATGCAAGTGCAGTTTTAAATTGAGTTAAAGCTAGGTAAGTAGGTTG AGATTCTTATTCCTTGATAACTATATTCCAATACTATATTTCTCAATGTT TCTTTTTAACATCCAGATACCATCAGAAGGTACCAGAGGAAACTCCTGAA CTAGAGACAACAGAAATTGGAATAGCAAGTCCTGTTGAATTTGCCTTGCC TTCCCATAATCCTCGGTGGAAACCAGAAATCTTTGCGGCTTTTGACGCTG GAAAAGCTCAGTCACAGGTCAGTAATGGTATTTTGATGGGGTGTACTGTA ATTGTATTTGTTGCTACTGCAGGTATTTCAACACCTTGTTGAATGGTAGA AAAGGAAGTAAATCTTGCTAAAGTTGTTCtttaaaaaaccattaaaatct TGTTGAGCTATAAGATCCTCATATTCCTCATATTTTGACAAAGTTGTCAA AAGATTTTGAATACTGTCATCTGACCTTATATGAGAACCCATTAATGAGC ATTTTATTTCTATAAGTGGGGGACCACCTACCCAATGTCTATATTTACAC CTAAAGtttctcatattttttttcagatgacGGGAAAAGATAAAGAAGAC AACGAGAAAATTGAACCAGTCAAAGAGATTGATGATCCGAATTCCGCcgg gaataaaaatgaaactgGTTGTGTTATCTCATGAACATTCTTGACGCCTT TTGCACTCATTTACACCCGTCACGCCCATCTTTCATTCACAATACACATT TACTCTTATTGGCTCTTTGAAGAGAATTTGTACGTGAAATTAGATAATTT GTAGATAATGAATTCAACAAACGAACTTTTGGGTTATGAATAGTCAACGG TCAACGCTGGTAGATAATTAGAAATTGTTGGACGGCTGAACAGTTTTCCA GCATGTAAAATTTGCACTTGAATTTGATACACGTTCGACGCCTAGTACAA TTAAACAGTAAAATTTAAACACTAAAACGGAAAATGTATGTTGCTAAATG TAACTTTCTGGTACCTATCAATCTATTTTGAAAAGTGCattatcatttta atttttatcttactgatttttatttgttcgaaattgtaatattattttta atttttgttacaattttgaaaatttaagtaAATAAGACGAAAGGTATTAT TACATACATTATTTAAAAGAACCAAAATGAAAATGTATACCTCTTAAAAT ATTATGCTAAACGAGAACAACTCTAAATAAATTTCCGATTTCAAGCCTTG GCCAAGGAtgttattacacgttttttttttctataagaacattttgatgt tcctaactttttgagttttatgcctaaaaatgttcttatcatgttctaat ttcaccattttgtgagtaattttgtcctttttttaagaaattgggtgttt tagagtttgc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00014666TCONS_00014666Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00014666-proteinTCONS_00014666-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000197supercontigsc0000197:5505..10564 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
BROXPREDICTED: BRO1 domain-containing protein BROX isoform X3 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
15.68 15.31 23.68 23.54 61.08 46.7 54.85 55.51 57.47 60.28 58.1 41.24 48.93 42.41 34.87 38.91 37.4 38.22 38.44 56.83 35.39 35.21 29.08 32.04 32.55 35.91 55.78 44.49 35.83 34.08