XLOC_007645 (gene) - C. hemisphaerica

Overview
NameXLOC_007645
Unique NameXLOC_007645
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000171:357272..360935+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007645 ID=XLOC_007645|Name=XLOC_007645|organism=Clytia hemisphaerica|type=gene|length=3664bp|location=Sequence derived from alignment at sc0000171:357272..360935+ (Clytia hemisphaerica)
aagcAAGCGTGTTTCTCGGCGATCGAAGAAAGACGGGAAACGAGTTTCTC
AACGGTTTCGCACGCAAAGCTGCTTGATGATCTTTGCGCAGATTGGGACA
AGCTGCGCGCATGCGTCAGAAATGCGTGTTTAAATGTCTCgtgttttcat
ttcaaaatcctCGCTCTTGCAAAAAGTTGTAGTTGAGAAAAGAAGTTATG
GCACAAAACAAAGACTTGAAAAACATTATAAAAGAGATTTTGGCACAGCT
GAAGCAGAGGCtcgaagaaaaaagattttacgaCCAGACAACCTTTTCAA
AGCATGAGGATCAATTTAAGAACACACTAgaagttattgaaaatttgaat
gatGCCATAGAACCGCTTGAAGCTGGAGAAAATATATCTGCCATGACGTT
CATGAAACAAGGTAAGTTCTTTTTAGAAGATAGGATTCAAATGCTAAGGC
TTGCTGACAGGGAAGGATGGACAGTGGTGAAACTTTGTGGACAAAATCTG
TTGACAAAATCTGTTGCTTTCGAATGgggaaatgaaagaaaaacatttga
aagagGCCAGAAAATCTGCCGaaagaataaaacaaaacaTAGAGATTGAA
CAGAGAAAGATAAACTCGTCATCTTGTTTTTAATGATGTTGCGTGCTACA
ATTGCAAAAAGTTGGACATTATTCGACATTTTGTGCAAAAGGAACAGCCA
CAAGTCCCGAATTGTCAAAAAGTTCATCAACAACAACGAGTTCTAGCAAA
CACAGCTCATCAAATTCGtatcatcaaaatcaaaaagcaGAAGAAATTAG
TGATTAACTGAACATAATAAACATAAAGGAAACAttgtgtttttatattt
tttctaattgCTTTCGACGGTTGAGTTATCAATAACATCGCgaataacat
ttttttctttcttacatGGATCCCAAGGGAAGAGAACAAATCGGCTGACA
TCAGTTCAAAATCTATAGATACCGATAATTGGTTCATCGACATTAAGATT
TTCCTATAATTTCATATCTCGGGTCGATTAATAGATCGATTTGCAAATAA
TTTAAATACGAAGTCAACAAACTCANTAAGATTTTCCTATAATTTCACAT
TTCGGGTCGATTAATAGATCGATTTGCAAATAATTTAAATACGAAGTCAA
CAAACTCATCTACTGGTATGAATACATTCGCTTGCCATTAGGGAAAAGAT
AAACTTAATTGGTTATGTCCTCCAATTTCTTTAGTCGGGAAAACCATCAA
ACATCTGAAAAACTGTCAAGAGAAAAGTATTCTTTTTATACCGTTATGGC
AATCTGCTTATTTTTGGTTGACATTTAGACATTTTTTCAATGCTTCTCTG
TCCCtgtttatatgtttttttttttactctgcTGAACGATTATTGGAAAT
GCTTATTTTGTTGTTGTGTACTTGACACTAGAGGCGAgaacatagtttgt
tcttttttcgaTCCAGGTTTTTTATGATGTAATCTTGTAAtttgttttct
cattttcatgTGTAAAAATTGAGAACAACCGAATCATGGTATCGATGCTA
TATTTGCTGGTACCGACATTATTATCAATTTCTGGCTATCGTGCTCTGTT
GCAGATATCAGTGTTTTGAGATTATGATGCACATATGTTGCATATTTGTG
GATATGAATGCCTCGTTGCTCATATCAGTTTTTGGTATCGTGCTCTGTTG
CAGATATCAGTGTTTTGAGATTATGATGCACATATGTTGCATATTTGTGG
ATATGAATGCCTCGTTGCTCATATCAGTTTTTGGTATCGTGCTCTGTTGC
AGATATCAGTGTTTTGAGATTATGATGCACATATGTTGCATATTTGTGGA
TATGAATGCCTCGTTGCTCATATCAGTTTTTGGTATCGTGCTCTGTTGCA
GATATCAGTGTTTTGAGATTATGATGCACATATGTTGCATATTTGTGGAT
ATGAATGCCTCGTTGCTCATATCAGTTTTTGGTATCGTGCTCTGTTGCAG
ATATCAGTGTTTTGAGATTATGATGCACATATGTTGCATATTTGTGGATA
TGAATGCCTCGTTGCTCATATCAGTTTTTGGTATCGTGCTCTGTTGCAAT
ACCTTTTTAAAGATATCGTTTGCGTGAATGCAGATATCGTTTGACAATTA
TCATGGTATCACTGCTCTGTTGCATATGCCATTTCCAGAGGTATGGGAGT
TTTCTTACATTATGTTTTATCAATTTATTCGGAGGAGATTACGCATCCCT
TCTTGAGCAAAGGATAGAAGCAATAAAAGGTCAGAAACTATGATAAGTTC
CAATGGAAAGGAATTCAAGCCTTTGGTTAAGCAATTTCTTGTGTTAGATC
CTTATTTTATTAACAATTCTCACATTAGTTATAATTTTTGATGGTTTTCG
CTAATTCTTACTCGTCANGAAGCcattgtcaatcattttcttgtGTTCTT
ATTTTATTAACAGTTCTAACTAGTTGTAattttttatggttttttgGCTA
ATTCTTACTCGTTAGCGCTACATCACATCCGAAGACGAATAATACATTTT
TTCAATGCATACTGCCCGTTTATAATTTTCTACTCTACTGAACAACTATT
GGAAATGCTTATTTCTTTGTTGTGTAATTGGCTCTAAAGGCAAGAGCatg
tttgttcttttttttgatccaagtttttcatgatgcaatcttgtaatttg
ttttctcattttcatgTGTAAAAATTGAGAACAACCGAATCATGGTATCG
ATGCTATATTTGCTGGTACCGACATTATTATCAATTTGTGGTTATCGTGC
TCTGTTGCAGATATCAGTGTTTTGAGATTATGATGCACATATGTTGCATA
TTTGTGGATATGAATGCCTCGTTGCTCATATCAGTTTTTGGTATCCTGTT
GCAATACCTTTTTAAAGATATCGTTTGCGTGAATGCAGATATCGTTTGAC
AATTATCATGGTATCACTGCTCTGTTGCATATGCCATTTCCAGAGGTATG
GGAGTTTTCTTACATNGATGCAGATATCGATTGGCGATTAATTAGTATCA
CTGCTCTGTTGCATATGCCACTTACAGAGGTATGAGAGTTTTCTTACATt
atttgttttatcattttattcGGAGGAGATTACGCATCCCTTCTCGAGCA
TAGGATAGAGGCAATCAAAAATTAGGAACCCTGATGCTAAATAAAATCGA
AAAGAGCCTATTACATCTGAGTTATTGTTGATCGTTACACCACTTCGGAC
AACCATATTATATATATCCTACACGACTGCAAGGGAGTCTTTTGAAGAGC
ATTTATCGGGTCGAGAAGAACATTTTGCAAGAATTCTcgtcattggattg
gtcgttaactattcagACAAAGCTCTTATTACatgttttctaaagaacgc
gtcatctttattgttttgaataactaattatgTAAACATCATATAAAAAC
CTCAACCCAATTGCATTATCATCAAGAACAGTCATTCTAACAGgttcaaa
attttccaaccgATTAGGAATataaacaaagaattttttgcatccatacc
ttttctttttttcccctCGTGTTTTTCATTGCAAGATGTATccaataaac
aaacaaattcatgttttttattatttctacTTTCTATGTATTATTCTTAA
GCTTTGAGGAGANN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00013679TCONS_00013679Clytia hemisphaericatranscript
TCONS_00013680TCONS_00013680Clytia hemisphaericatranscript
TCONS_00013681TCONS_00013681Clytia hemisphaericatranscript
TCONS_00013682TCONS_00013682Clytia hemisphaericatranscript
TCONS_00013683TCONS_00013683Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00013682-proteinTCONS_00013682-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000171supercontigsc0000171:357272..360935 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
55.69	47.24	26.25	21.38	10.41	7.36	28	26.74	70.62	44.08	40.41	69.24	10.97	13.66	17.63	14.54	17.28	19.9	7.28	6.04	13.9	9.78	31.76	31.1	0.33	1.21	1.04	1.15	20.34	15.91