XLOC_007542 (gene) - C. hemisphaerica

Overview
NameXLOC_007542
Unique NameXLOC_007542
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000168:276591..283019-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007542 ID=XLOC_007542|Name=XLOC_007542|organism=Clytia hemisphaerica|type=gene|length=6429bp|location=Sequence derived from alignment at sc0000168:276591..283019- (Clytia hemisphaerica)
GAATGGACTCCTTTTTGGCTTTACCCCCTGGTTCCAGGTGACTAAAAAAT TTTTCAACCAACCACTGAATCAACTATGGGTTACTACCCTCAGTATGTAA GAACTAATAAGGGGTCAGCTAAATCACTAGGGAGACCTAGAATGTGCATA TAACCCATGTCCGCCCTAAAGTTATCAGTAAGTGATTTATCTCAAAATGG AAAAAAATGGACTTATGATATGATAATTTACAATATTAGTTAAAGTGACT ACAACAAGTCCCTCACTCACTCATACAAATAGAACAATATTTATACAAAT AGACAATTGATGTCAAATTTTGTCTAATATAATCAGGAATTTTAGCTAAT CAGCTTCCACCCATTCCATTTTGGTTCATTTGATGTTTATATCTTTTAAG ATTTCTATAAAAAAATGAATAGGACTCAACAACAAACACCACCAGGTCTT GCTGCCATTTATCGATATCTCCGAAGAATATATCCTAATCAAACAAATCC ATTGCAAGTGACAGCTCTTGTCAAATATTGGTAAGCAATTATATGTTATT AATTCTTTAAATATCTAATTTATAACTTTACGACTGAAGCTGCCACACCA GTCATTTTTAAATATTGAGGTAACGAACTTGAGGAAAGAACCCTCATTGG TTTTTTAGCAGATTTCTTGAACAAACTTCCCTTTTGTAAATTTGTCAGAG TTACCTTTTGTTAAAGGAAACTAGGGATCTCTTTCAAATTCATTCCAATA ATGTAATCTCCATTTAAAAATGTCAGAAACAGACCTGCCAACTTGAGATG TTCATTTTGCGTGAGATAAAAATTGGCACCTCTCCAGAAATCCTTGCTAC TGGAAAATTGTTTGACCTTTGTGGATTTTCCCTAAATCTGCTTTAAAATC AAATAATTGTAAACAAAATATTTTTTTGCTGATTCTGGCTGCTTTGCTCT TGAAGTCTGCTCAGTTGAGATACAAATACCCCTGTCATTGCAAGTGCAAT AAATCTTGGTCAAGTGACCCACTAGACTTCAGATTTTGAGTAAGATTCAC AATATCTATTTGCAACACTGTCAGAAACAGTAAATCTCTCGTGAAGAAAA GTTTTTTAATACTTTAGATCAATTCATTATACTTGTTGCGACAAGAAATA TAAAATAAAATAATAAAATTTCACAAATGTCCCGATATAACCATTTTAAG AAAATTTCAAGTAACTTGTAATAAGAGTGGGAAAGCAGCAATTCAACTGA AAGTTTTTAAAATAATTTTTATTTCCTTCAGGTTAAATGGACCCGATCCA TTAGATTTTGTGAGTATGTATGATAACCCTGGAGATTCTATCCTCAATGT GCCTCCTCATTGGCATTATGTCAGCTGTGGATTGTCTGATCTACATGGTG ATGGAAGAATTCATGAGTAAGCTAAGTTAATGGTAGTGATAGCATCAGAA AGTCTTTGAGTGTAAAAACATCAAACATTCTTTGCTTGAATACTTATTAT AACTTTTTTTGAATGACATTAGGTGTAACAGGAAGAAATTATAATGTTGT TTTTCTCCACAGGACATGACTTTTCGAATTTCTTTACTTCAATTTATATA ATTCTTTTAGATTGACATTGCAACAGTAAGTCCATTGGTTTTGAGACAGT ATGATGTATTTTAGTGGTGTGCAATAAGAATAAATACATTTTTATAGGGC AACACAAGATGACACGGGTCCTAGTGGTTACGGTTTTGAGCTTACCTTTC GCTTACGAAAAATGCCTGGAGAAGAGTATCCACCAACTTGGCCTGCAGAG TTGATGCAGAACCTAGCAAAATATGTTTTCAAATCAGGTATGACATGTTA TAAAAATAAAAGAATATTATTTCCTTAGATTCTGAATCATGCGAGCCAAA GTTAATTATTTTCATATACACAGTCTTCTCGCGGTTGGATATAGGACATA TAGGTTCAGTAAAAACCGTATTGGTGGCCAGGCTTCTCAAGGAAGACAGA TACGGTATATATCTCACCTCCATGTGATTTCTTTTGACCAATAAAACCGC TAGAATCTTACTGATGCAGGATAAAGTTTGATAGTGATAGTTTGGTTGCA GGCCTTACTCTGGAAATTAGGAAGTAGAAAAGTTAAAACAGCACAAAACC AGCAGTTATTTCCTCAAAAAAGAGCAAAACCTGTACTAATTTCAATAGTT TTGTTTGTGTTGTGAAACAAGTAATCAATTAGGTTTGTATTTTCCTATTG CTAGAGCAAATGTTGTGTGCAACTGATCACATATCATGGCATACGCCATT AAACGCTAATGACAAAATGACCAATATAAATCAGATGTTATTAAGTGAAG ACCCACAGCTACATCAGCTCAATACACCTTTTGGATATGTTAATTTCATG CAGGTATAAAACATTATGGTATGAGACAGTTGCCAATACTATTTCACATA AAAACTTGAGAAATTGAGAACTTGTATGCAATTAGTTGGATATTTTTGGA TCGCTAATAGATTGTATTTTTACCTGGGCTGCACTTTAAAAACTGTTGGT TTGCCATCACCCAACCCACTCTACCTCTACCAACCCAAAAAATGTATTTC CTTTCTTCAAATCAAACTTCTATCGGTTCAGTCTGACTCTGTCTTTTAAG ATTAAGAATCGCTTGTGAATTTCCTTCTAGCTCTTACTCTTTATTTTTTT CCAACCAATCGACCCGTCTCTAAAATCTAGGGTCAGGCGACGGCAAACCT ACTTTCCAGCCCTATTACAGATAAGTAAGGTATGAAAAAGGATCTATTTT TATCGTTTATTTTTAAATGTTTCAGATAATTGGAGTGTTCACAGAAGAGT TGCAAGCTGCCCAGCAATGGAATGGATTAGCTGTCATCAATTTATTGAGA CAAATCCCAGAGTATGAAGAACATTTATCTGTCAGTTCAAATACCCAACA ATATTGATCTGAGCCTGCATTGTCAATGCAAGNCGTCGCATGAGAAATAA AGAGACTTGTCTCCATTTTCCTTTTTTTGAGATATTAGAATTTAAAAATT TAGAAATAAAAAGACTTATCTCCAGAAAATGGAGATAAATCTTTTTACTT CTCAAAATTGTGAATTTTGTTACCCTTTACTTTACATTTAAAAAATGGAG ACAAGTCTTTTTACTTTGGATTTAGGGCTGTCTTTTATAAAATTTGTTCA AATCTGCAACCCATTAAAAAAAAAGAGATAAATTTAAAATGTCAAACCTC ATGGATTTAGGTCTGTTTATCTCCAAGAATTTTTTCTGATGAATATGGAT CAATCATTGTCTCATTTTTCGAAAAATTGGAGACAAGTCTCTTTATTTCT CATGCGACAATTTATTTGTCAGTTCAAATACCCAACAATATTGATCTGAG CCTGCATTGTCAATGCAAGATTCAAATCTTATTGGTCAAATATTATTCTC CAAAACATCAACCAAAATAACTTCTCTTACTTTATATCACAGAGCTGGAG GCCATTGGTTCGTTACAGATATGACAAGACAGAAAAGTATTTTTCAAATG AACCCTAGATTAAGGGTAAGATTTATTTACAAATTTCTTTATGAACTGCT TTACGTTTTACAATTAAAAATAAATTTTGTGAAAACTTATTTATTAAAGA TAGCTTTTCCCAATAACAACATGATTCGAATTAACCCATGTAATGTTTTG TAGGAAATGGTTGAGATTGGGATCGCTGACGAGGGGTCAAACTTAAGTGG AGTGAGCGCAAAATGTTGGTGGGGTGAATGTAGTAAAGACAGAATCCATG AAGCTTTGGCGACTGCACACAATAACCAATACCCTGAGAGACCAACTTCC TCTGCACTCTCAAATCGAATCAGAAGCTCGCTGCAAAAGTAAAAGAAATT TTCACTTTTTCAACAGAAAAAACAATGCTGTCTTATTGATTTCACCATTC ATATTATTGATGCATATGGTAGATGGTACTAGGCATAAATGTAAATGATG ACACGAATGTATGTTTCTCTTTCTTGACTTTGAATTGCTATGATGTGAAG GGATTACATTGATATCTACTTTGCTCTCGCTGAAGCCTGGAGGAAATCAG CAAATTATTTTTCCAAATCCCTGCAATATTAGGGTTGTACTATAAACTTG TTTTCAATCTTTCACCTTAGCTACCGTAATGAAGCTGCAGTTGAGAATGA AAGAGCAAGTCGTGCGTCAAATTACAGTTCAGTGAGCGAACTACTCAAAT CACGACCAATCACTGAAGGATTACAGTTGAGGTTCAATTTAGAAGCTGCA GCACTACTGCCTTTGGCAATCAGGTACTGAATTTTGATGTATTTTTTCTC ATTCGGATTACTGGCTGTGAAAAGATTGTTTTTATAATACAGTCTCCCCT TTGAAGATCAGTGTCCTTTCTCCACTGCCTCAAATTGCTTACTTTAAAGG TTTATTTCTTTTTCTTTTACAGAGGTCGTTTAGCCCATGGTAGACATTTT ACATTTAAAGGGGCACAAAGTGATTGCGCCATCACCTTTGTGTCAACTGA TATAACAGGAACAAGTGTGGATGAAAAGTATCCATACGCTGCTCTACAAA ATTGGCTCCAGGTAAGTCCTATCTTTACAATGTTGATAGTAACTTTTACT ATTTTAATATGATATATTCTAACCGATATTCATAATATGCACTATTGCAA TGTCTTCTGACATTACATCACGGACCCAACAGCTGATTGGTTGTAAGTGA CGTAAAATCAGTCAAAACGTCACTTTCAACCAATCAGCTGTTGGGTCTGT GTAATACATTGCAATGGTGCATATCATGAATAGGACGAAATTCCAAACAT AAAACCTTTTAAAAAGCTGTTGTTCGCCTTTTAGACTTTTCTTTGGCTAA CTTAAATATAAAATACTTTCTCGAAATTGTTTTTCTTTTAGGTGTTAATA CCTGATGACTTCTTAGAGACTTTAGCTCATGATTTTGACCAACTACAACG GCGGCCAGACGAGGTACATATTTATTTAGTTTGATTTTCCATTGTTAACT AGATTCCAAACCGTTTTAGTGGAAAAAACAAACAATACCTCTATTGTTTT CATATATTTTACATTTTGTCGCATAAGAAATAAAAAGACTTGTCTCCATT TTCCTTGTTTTGAGATATTAGCATTTAAAAAATTCAGAAAATGGATATAA ATCTTTTTAATTCTCAAAATTGTGAATTATGTTGCCTATTACTTTACATA TAAAAAATGGATTTAAGTCTTTTTTACTTTACATTTAGGGTTGTCCTTTA TTCAATTTGTTCGAATCTGCAATTTATGACACCCATTAAAAAATAGAGAC ATCAAAATATATAAGGCCAAAAAGTCAAAACTCGTGGATTTAGGTCCGTT TATCTCCAAGAATTTTGTCTGTAGAATATGGATCAACCATTGTCTCGTTT TTCGAAAAATCGGTCCCTTTATTTCTCATGCGACGATGTTCGCTTTATTT TGGTCAATGCCTCTGTTAACCCTCTTTGGTTGAAAACAAATTGAAGTATA TTTCCAAAGCAAAACCCCAGTGACTAGTAAAGTTAAAAACTACTAGACCT TTCTTATTTTTTAGATTTCTTTACCGAAACTGTATGCGTGGCCACAAAGA AATTTGATGATTACCATTGTTGGTGATTCGTGAGAAAAACGAAAGGTTTA TATTGAGTCAATATGGTTCTTGTATTTTCTCTGCATATTGCTGATTGGTG ATTTTCATCACTGATCATTCGATATTTAAGACACACTATAAAGATGTTAG TATTAAAGGTTGGATTAGGTGGATTATTTTCTGTTAAAAGTTCTTTTTTT TTTCAAAAACGATAGATTTGTGTATATTAGTTTGTATTTTTGTCTTTTTT GTTGTTTTTTATTACTTTACTGTCATATTTTTCAAATGTTCATGCGATTT TGTTCTTGAGTCTGGAATCTTTGGAACAGATTTGATTTTAGATTTTTTTA CCATTCATCATCATAATTATGAAATATTTTTATTTCTTCGATTTTTTACT TTTTTAATAATAAAAGTTTTCATTTTTAAAATTTTAAGATTTTCATTTTT TTTATAAACCCATAGAATTTGCCTTGAATTATATTGATAGATTAGCTGAT ATAATTTGTTTTGTACAAATTATTTGCTCGATCGCAGGTCTTTCTAACTT TAAATTTTATTTTTAGTTTTTTAACTTTTTTTAATTTTATATATTTATCA AAGAGAAAGGAGTTTAAAGTGGCTTTTTATTGATGATATAGTGTCAGTCC TACATTAAAATTAAACCTTTCAAGAATTTAGCTTTGTTAGATAAATTAAT CTAATTTTTATACCAGTTTTAATTTTTATAAAGCACATCACTAACTTGAA TTGAAATATAATAATATTTGATATTTTGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00013505TCONS_00013505Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00013505-proteinTCONS_00013505-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000168supercontigsc0000168:276591..283019 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
SUFUPREDICTED: suppressor of fused homolog isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.55 3.28 16.31 21.33 36.56 28.11 23.89 26.72 28.14 30.06 20.54 25.03 9.6 9.69 13.03 13.71 8.92 9.53 6.42 7.06 7.91 7.5 7.77 10.01 5.95 6.91 26.32 20.46 17.08 15.97