TCONS_00013505-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013505-protein
Unique NameTCONS_00013505-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length438

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013505-protein ID=TCONS_00013505-protein|Name=TCONS_00013505-protein|organism=Clytia hemisphaerica|type=polypeptide|length=438bp
MNRTQQQTPPGLAAIYRYLRRIYPNQTNPLQVTALVKYWLNGPDPLDFVS
MYDNPGDSILNVPPHWHYVSCGLSDLHGDGRIHEATQDDTGPSGYGFELT
FRLRKMPGEEYPPTWPAELMQNLAKYVFKSEQMLCATDHISWHTPLNAND
KMTNINQMLLSEDPQLHQLNTPFGYVNFMQIIGVFTEELQAAQQWNGLAV
INLLRQIPEAGGHWFVTDMTRQKSIFQMNPRLREMVEIGIADEGSNLSGV
SAKCWWGECSKDRIHEALATAHNNQYPERPTSSALSNRIRSSLQNYRNEA
AVENERASRASNYSSVSELLKSRPITEGLQLRFNLEAAALLPLAIRGRLA
HGRHFTFKGAQSDCAITFVSTDITGTSVDEKYPYAALQNWLQVLIPDDFL
ETLAHDFDQLQRRPDEISLPKLYAWPQRNLMITIVGDS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007542XLOC_007542Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013505TCONS_00013505Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020941SUFU-like_domain
IPR024314SUFU_C
IPR016591Suppressor_of_fused_euk
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008134transcription factor binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008134 transcription factor binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020941Suppressor of fused-like domainPFAMPF05076SUFUcoord: 42..222
e-value: 8.2E-47
score: 159.3
IPR024314Suppressor of fused C-terminalPFAMPF12470SUFU_Ccoord: 235..434
e-value: 3.0E-60
score: 203.7
IPR016591Suppressor of fused, eukaryoticPIRSFPIRSF011844Sufucoord: 2..438
e-value: 3.2E-155
score: 514.4
NoneNo IPR availableSUPERFAMILY103359Suppressor of Fused, N-terminal domaincoord: 7..242

Blast
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BLAST of TCONS_00013505-protein vs. Swiss-Prot (Human)
Match: SUFU (Suppressor of fused homolog OS=Homo sapiens GN=SUFU PE=1 SV=2)

HSP 1 Score: 444.891 bits (1143), Expect = 6.744e-154
Identity = 223/451 (49.45%), Postives = 303/451 (67.18%), Query Frame = 0 
Query:    9 PPGLAAIYRYLRRIYPNQTNPLQVTALVKYWLNGPDPLDFVSMYDNPGDSILNVPPHWHYVSCGLSDLHGDGRIHEATQDDTGPSGYGFELTFRLRKMPGEEYPPTWPAELMQNLAKYVFKSEQMLCATDHISWHTPLNANDKMTNINQMLLSEDPQLHQLNTPFGYVNFMQIIGVFTEELQAAQQWNGLAVINLLRQIPEAGGHWFVTDMTRQKSIFQMNPRLREMVEIGIADEGSNLSGVSAKCWWGECSKDRIHEALATAHNNQYPERPTSSALSNRIRSSLQ--------------NYRNEAAVENERA-SRASNYSSVS-------ELLKSRPITEGLQLRFNLEAAALLPLAIRGRLAHGRHFTFKGAQSDCAITFVSTDITGTSVDEKYPYAALQNWLQVLIPDDFLETLAHDFDQLQRRPDEISLPKLYAWPQRNLMITIVGD 437
            PPGL AIY   RR+YP+Q NPLQVTA+VKYWL GPDPLD+VSMY N G    N+P HWHY+S GLSDL+GD R+HE T  D GPSG+GFELTFRL++  GE  PPTWPAELMQ LA+YVF+SE   C+ DH+SWH+PL+ ++  + I  MLL+EDPQ+  + TPFG V F+QI+GV TEEL +AQQWNG  ++ LLR +P AGG W +TDM R ++IF+++P L+E V+ GI  +GSNLSGVSAKC W + S+    +  + +       R  S   + +IR +L+              N + +  + ++RA SR  +  S S       EL+++R + E + L+FN E+ AL+PL +RGRL HGRHFT+K    D AITFVST + G    E++PYAA   WLQ+L+ ++F+E +  D + L   P+E  LPK Y+WP++ L ++I+ D
Sbjct:   31 PPGLHAIYGECRRLYPDQPNPLQVTAIVKYWLGGPDPLDYVSMYRNVGSPSANIPEHWHYISFGLSDLYGDNRVHEFTGTD-GPSGFGFELTFRLKRETGESAPPTWPAELMQGLARYVFQSENTFCSGDHVSWHSPLDNSE--SRIQHMLLTEDPQMQPVQTPFGVVTFLQIVGVCTEELHSAQQWNGQGILELLRTVPIAGGPWLITDMRRGETIFEIDPHLQERVDKGIETDGSNLSGVSAKCAWDDLSRPPEDDEDSRSICIGTQPRRLSGKDTEQIRETLRRGLEINSKPVLPPINPQRQNGLAHDRAPSRKDSLESDSSTAIIPHELIRTRQL-ESVHLKFNQESGALIPLCLRGRLLHGRHFTYKSITGDMAITFVSTGVEGAFATEEHPYAAHGPWLQILLTEEFVEKMLEDLEDLT-SPEEFKLPKEYSWPEKKLKVSILPD 476
The following BLAST results are available for this feature:
BLAST of TCONS_00013505-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SUFU6.744e-15449.45Suppressor of fused homolog OS=Homo sapiens GN=SUF... [more]
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