XLOC_007133 (gene) - C. hemisphaerica

Overview
NameXLOC_007133
Unique NameXLOC_007133
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000147:529359..536394+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007133 ID=XLOC_007133|Name=XLOC_007133|organism=Clytia hemisphaerica|type=gene|length=7036bp|location=Sequence derived from alignment at sc0000147:529359..536394+ (Clytia hemisphaerica)
GTTAGACAACTATTGAAAGTACATGGGAgagaaaaaagtgaaagaacAGC TATCAATCTTACAATACTCATTCGCTGGTGCATTGTCAGGAGTGGTTTCC AGATTTCTTGGTCAGCCTTTGGATGTTATAAAAATCAGACTTCAATTACA GAACAAAGaggtaaaattttcaatttatctAATTTCTGCAATCTCATCGA TTATTAGTTTATAGCTAGCTGTCCTATTGTAACGCTTATTCatgcatttt gtttttttcacgtACCTGCTTTTAACacaaggggccgtccacatagtacg tacgcacaaagggggagagggggtcttctcaaaagcgtatgctggCGTTC AGGGGGAGAGGAGGGGTCAAagaaaaatgtacgtacgccgagaaaaactt tttcatttttgcttgtttttttgtcgacttttacgcttctCATCCGcgtc aaggaaaagaaaaagaaaattttttttataaccattgagtttcatgtatg aaataaaggtctgAACCAAGcaatttgaattcgaaattttcttcaatcgA GGGGGTATAGGTATAGCCATTTGTGTACGCTTgtgtacagggggaggggg tactggatttttgacattttagtgcgtacgtaatatgtggacggccccca aTACTAAAAATCTAACTAATGGAAATTCAATTTCTGATCAATCCGTCAGA GAGATTAAGATATATTTTCCATACCTTTAGGCAAAAACAGACATTGAGCA ATTCCTGATATTCCTCTTTGGAATTTAGTTTTGGAACTTTTTATTCAAGT CAATTGCAGCATTTTGTTGTcaattttatttacaaaatttgataGATTAG AGTTAATTATGGAAAACCATTAAAGAGGAAAAAACATTCAAATGGCAAAG GCGTAAAAAGTGCTGGCAAAAACAGTGAACTTTTTTCCTTGTTGGCAGCA ATTTGACaacctttttcttttcaaattcctGCTGACAGAAGAGATACACA GTTGAAGTTTATTCACTTTAATTGTGCACTaaagtttgttatttttacCA ATTCTAAAGCGAATTGACTTTAAATACATTCTGAAACAATACGATCccac ttttttttaaacattattattattaataactgttaataaacattaaaaat tgCTATAGTAAATAGCTCTTTGTACTATCATAAAATCTCTGATTTTAGAA TCTttcaaagttttatatttttttgttcattcagGCTGGACAGTTGAAAT ATACAGGAGTCCTCAATACTTGCAAGCTTATTTTCAAAGAAGAAGGGCTG TTTGGGTTTTGGtatgtttgatttttcaaaatgatattATCATACAATTA TTAGATAATTCAGTGGTTTTTGTTAAAACTTGTACTCCAGACAAGATTTT GGTCACCACTTTacttcaaaagttttctttatttcaggaaaGGTCATGTC CCTGCCCAGGTCCTTTCCATTTTCTATGGAAGTGTGcaggtaaaaatata aattttattttgttcttaatgTCTTTGATAAAGCTTTTTAAGGAttattt tcacgcattcatgtGCCTCCTCTTATGAAACTACCTACCCAAAGCTGGAA GAGAACAACTCATTTTgctgaaaatcacaaaatacCTGTTTATTCTTACA ACCGGAAAGAGGGTGCACTATTTGCATTACACAACTTTTGTTCGGATTtt ggttttcatttttcatttttgtattgaCCCTTCAATTTTTAGCATCCCTC GAACCTTGAAACATGCCGATCCAAAAGTTTTTAGTGTTCTCCAAAACTGA GTCTTCACACTGTAAATTGCTTTATTTCTCAACAGTTCGCATCCTTCGAA AGATCGAGGAGTTTCCTGAACCCATATCTTTGTCAAAGAAAAGAGTTGAA TGGTATGTATCTTAAGGAAAGACTACTACGATATCCCACTCCTATTCCTG GCaatttacttaattttttagaTGAAGGATACATCAAATATATTGATCAC AAAGTATTCCAGATATTATAATAGATCATGTAAATAATCCCTTACACGAC AGTcgacacaagaaaaaaaaatgttttttttttaattttgtagatttttt gtcTGGTGGTAATGCCGGCATCGTATCATCATTATTTGTGCACCCGTTGG ATTTACTGCGTACCAGAGCTGTCAGTAACCAAGCCAAGCAGGTAAAAGCC TCtatatttatgatatgcaccattgcaatgtcttctgacattacatcacg cacggacccaatagctgattggttgtaagtgacgtaaaatcagtcaatac gtcactttcagcCAAtcctgttgggtccgtggaagacattgcaatggtgc atatcatgaattgttgtAATGGTAGCTAAGAGGTTCTCCGAAACACAGAA GCCTTGTGCTTGAATTTTTTATAACACAAAATCGAACTTTGTGAACAATA CAATTATAGAACAGTCTCCTCATCAGAAGCATGAAACTGCTAGATATAGG TCACGTGACTCGGCTAGCCCGTTCAAACCCACCTCCATATGAACAACTGC TAAGTTTGTTTAGAATTTTCAGACTAATGCGATAACTAGCTATTTTCAAG CACTCTCACGATTGTTAACTTTTCGATTTTTCCCATCCCCTCTGGGCATT TATTAGGACCCTCCGtttaacaatttttgaaataaatttgaacTGTCAAA AAAgggtcccttattttgctcaaaatagCCTCGTAATGGtctataattac cttattttgggtttATTTAAAGGTACAATATCATACCCCCCGGCAATTTg gtcccccgtttattaaaatttacaGATTTACTAGCTCCCACCGTTTCAGA CCCTGCTTCCGGTTTATTAGGCAACTGAGAGTATAGTTGAGAGTTTAGCT AATTCTAAGAAAACGGGACATATCCGCTTTTATATCCGGCTTTTACCCTT GAAAAATGCTGTAATGTCAACAGAGGAgatatttgtttatattgtcaCCA AAGCACTCGACTAAGCACTAAATGACATCTggtattgttttattttcttg CAATAAAAGCTTTTACTATCAGAATAACTTACAGTTATAACGTGTTCAAA AGTTAGAAATAGTTGATTATCTCTTTCAAACACATTACTAGGTTAAAATC AGGATCCAGAAAACAAACgaataatttttcaactttttcagtttcacCTC CTTCCTTCTCTTTAGTCTTTATCGTTACACATTCTGATCAAAAGCACAGC TCAAGAAAGTGGTATTCGAACTTTTTACCAAGGTATTCGAATGTTTCTTA TAAATCTTTTATTCTTTGATTTCTATTGCTTTGTccattcaaaaaatata taaaaataatttttggaaacTGTCTTTGACTAGAAAATGTTTGTCCAACT GATTAGCAGTTTATTTATAGCTAAAAGTCGTCGAAATTTTCCTCATCCAA TAGGTCGATCTTTATTGCCGTGTTGTGATTTGGCGTACCCGGCGGATTGA GGGGTGCTTGCCCCATACTTATCATCCACCTCAATGTACaatcttttgga aattttgaaacaccTAATATCTGTGTCAAAAAATGCAGTGTTTTTACTTT TGGCCGTAACTTTCCAACCAGTTGtcttataataaaaagtttgatatatc gttggaaagatatcaaATGCGCTCATGTTTTCCACTAATTAGTATTTCAA AATTCGTCCAAATTAGtgaagaaaaacgaagaagaaaatttgctaatttt gatAGAAGATGCGCTCATGTTTTTGGCTTCGTCCAAAAAAGTGcaggaaa acaaagaaaaaaatttgctacttttgatagaaaggtgctatgaaaaagat ttttacatCAATCGAAAGTTGAATAATACGCGAGTTCAAAAATATATGGG TTCGgtcaaagattttattttttgttttgagattTAAAGGGAAATCTGGC TaaaaatttcctgaaaattccaaaaaaaggaGGGAGGGCCTAACGTTTTC GAATATTCTGGGGGCGAAAGGGGTCTCAACTGATTTTGAGATAATCAAAA GCCAACTCTTTAAATCTAAGCATGGAttgtaaatatattttctcagaatt gtttttttttcagtattTAGATATTCACGAGTAGTTGTGTTTTTATATTT CACTAAGCCATAGTATTTAGGTATTTAGATAATGATGTACGTATTTGAAA AAGGAGAAAGATTTTAGCATTCATTGAACCCATGTCTAGCTTTTGCCCGG TAAACCCGAGAACATCTGGGGGCTAGCATGAATCAaattttctggggggg ggggctagggGAAAAGGGGGGACTGAACGTTTttgaattttctggggggc tgCTGATACCCCTGAGGACACTAGAGTTGTTATATTTTCGGACTCGTGTA TTATTCAGCTTTCGATTGATTTGAGACACATTTTCGATagtacctttttt tcttcaattttcgtcactttcttGCACAAATCTTGAAAAACTGAGTTGTA GAAAATATAAGCGTatttaaatatctttccaacgatatccAAACTTTTTA TTATACGACAACTGGTTGGAAAGTTATCGCCGAAAACAAAATTACTTTAC ACCTTTTTGACACAGACTTCAGTTATTCCAATGTCATGGTGAAAAACTGt cttttgacataaaaaactgcCATTCACATGTCATGGACATCGCTGGTCTT TGTTTAGTTTGTAAATTTCAATAAAGTACCTAAAGCaggtttattttttt attttttgtcccTTTTTAAGGAATCATTCCCAACTTGGCGTACGTTTATC CGTATTGTGGATTGAACTTCTTGTTTTATGGCTTGCTAAACAGGACATGG AACTTACTACAGGTATACCTTTGTATTATATGATGATATTTCTCACATAA ATTTCTAAAGGATAGGATTACTATGATAAGATATCagataaaaacattca aaattactgGATCAGATCGAATTCAAAGTGCTAAATTTTCTTGCTTCATC CGGTGTATGAATGTTGTTTAAAATATATGTACTTACTATGATAATTACTT TTCCTTTCATCCCTTAGTTCAGAGAGTCCAGCGTCAAATCTCTGGCATGT GGTACTATAAGTGGAATCTTCGCAAAAGCTTTACTTCTACCAATTGATAA CGTGAAGAAGAGATTACAAGTGCAAGGTTCTAAAGACTTCCAATCGTCTT ACAAGGGTATGGTTAACTGTCTTCAAAGTGTGATTCGTGAACAAGGAATA CATGCCTTGTATCGTGGTATCGTTCCTTCCGTGCTAAAGGTATACAGTAT GATTTTTTTGCTGAATAATTTGAGACTTCTTCAATCTGATTAGGATGACG GGCTTAAAAATAGCGAAATTTCCTGGGTTTaaaatttagtttgaaaattt gaaaaagaagttaAATATTTTCGTGTGGATTTACTTTCACAAGTCAACAT TTTTACGTGATATCGCGTGATTTTTCCCACAAAAAGGCAAAAGTTAAAgc aacaaaaacatgaaaagtagGACTTTCTTATATTGGGCATCACACTTACT AAAGTGATCGCTTCATATGTGCTCGATTTCAAGTATTTTATGATTTACTC AATACAAGAGGCGGGGTTAGTGAGAAAATGTTTCGCCCACGTATACTGTA ATTTAAAAGTTGATCGACCGCAAGCTATGGCAGTTGTATTGTTTCCTTCG CAGCTTTCGTAGattaaaggtatttttttacataagtgttcccgtttcat ataaGACACATACTtaatatcaggacagtgtctgcctattgttatattgt gctgatataaataacaaaaaaatgtttctcttttcctctttctgacaaat cttgctccacattcgcgtcaattcaatatcaaaaagcctttaaattaaag ttgatgagtaagcaaacgatatcactcttatttaaaaacaaaacctttaa agaaatCGTCCTTCCACTTACCGTTAATACCACAATGCTGTGTTTCATAA AGTACACAAATGATATTTATCCTTTATTAACAGAAATATTCTTTAACCCT CCTAATGGAcgtaaaaatatatcaaaaataggtttcttttgctAACCTTC AGATCATAGCTCAGAACCACTTCATTTTTACCCAAAGCTTTCTCGTTTTT TTGGAAAGCTTTCCAACGGTATCAAAGTTTTGTCTGAAACCCATTTTAAG GTCCGcaatcaatttttgaactttgagaAGTCGGAAAAACCTGAGAAAGT AATGTGATCTTCAGATAAACtgtattttaacttttattaCAATTGATGTC AATATTTGTACCTAGACTGGTCTGGCAACTGGTATTTCTTTTTTCGTCTA CGAAGAAACCTGCAAACTGTTGTCAAAATAAAGGATACAATTTATTTGGC AATGAATTACGCGAAATCTttgatttgatcaaataattcCATAACCCAAA TTACATGCTACGAATGCTAAGGTTTTATGGATCGTCACGAACAGAGTTAG CAGGTATTCATTTGTCAGAGAAAGCTTGAATATGCTTACTTCAAGTAAAG GACACTCAAGTAAAAGGAAAATGGATGGCTCCTTTAGCAAATATGGTTTA TTTGTCATTCGTCGCAGATAATTCATTGAAAACTTTTGCAAAGAATACTT AAGATTCTTTCTTAAGGACTctgtttaaaaatgtttttgacgCGCAGGAA GACGACTCCAAGAAATCAAGTACTGCTCAAAGGTCAATTAGAGCAATTCA AATTGATGGACTGATTTGTTTTCTGAAATTATTGTTATaatagaatattt ttttaataaacgcgtccctttattttttatcattcatACCGGAAAATAAT TCAACTTATATGCTTCCGCGATGAGGAAAATCGATTGGTGTTAACAAggc ggttcccgtcgtcgcaatcGCCAGTTTCAACTTTTGCTTGCACATCCAAA GCCCTTAAAGTCTATGTAAACATGCATAACTTAAACCGAACGCAATATCT TTATATTAATAGCCGCAAATGCAAAATGAccccccc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00012704TCONS_00012704Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00012704-proteinTCONS_00012704-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000147supercontigsc0000147:529359..536394 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
SLC25A19mitochondrial thiamine pyrophosphate carrier Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.9 3.63 2.58 1.94 2.84 1.98 2.89 2.74 1.62 2.2 1.6 1.19 2.39 1.81 2.25 2.22 2.57 2.75 0.89 0.67 1.44 1.91 3.85 3.28 2.37 2.37 1.12 1.11 1.9 2.92