XLOC_006820 (gene) - C. hemisphaerica

Overview
NameXLOC_006820
Unique NameXLOC_006820
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000137:512037..517917-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006820 ID=XLOC_006820|Name=XLOC_006820|organism=Clytia hemisphaerica|type=gene|length=5881bp|location=Sequence derived from alignment at sc0000137:512037..517917- (Clytia hemisphaerica)
CAGACATTTAATGGAAAATTAGTTAACTATGAGCGAAGGAAAACAGAGTC AATTTCGCCGCGAAGAAGAGGAGATTGCCAAAGGTGCCAGAGCCATGGAG GATCCTAAAAGATGTTCAATTTGTTTACAACCAAAAACTCCGAATTCTTC ATCCAACAAGTGTGATCAATGTTTGGATAAAATAAACAAAGTTCCAACAG GATTCGCTTTCAGGGCGGTGGAAGGCCAGGGAGATAAAGAATTCGAATGT CCCATTTGTTTGTGTTTAATCAAAGGAGCAACTGAGCTCCCTTGTGAACA TTTGATGTGTGGGGGATGTTTGCTTCACTATGAGAAAGGACAAACTGAGA AAGCGGAAAAGTAAGTTCAAACTTTTTTTTTATTTAGAAAAATCATAATC TTTTCTAGATGTCAAGTTGACCCAGAATTGATTTTTCAAGTTAAAAAAGC TTTTATATTTTTCTCAGATGCCATCAAAACTTTAGTAGAAGATGAAAATA GTGATAATTTGAAACTTAAATTGGGTTGAGAGAAGACATAGAATTCAGTC TTAATTTACTTCTAGTTTTCATCCTTTAAAATAAAGAGCAGTGTTTTGAT TTTTGAAATGAACAGATACACGCTTTTTTTTATAAGAATATCTTCTATAA GAATATCAGGGTGAAAATTGGCCAAATCGTAAGAATACCCTAAGAATGCC ATCGAGGGTGAATTTCATAAGAATACAGTCATTTTGTATATTTGGTTAAC AGAAAAATCTGCTTCCTTTGTTAGAGATGAAGCTTCGTGGAAGAAATGTA ATTTTAACCCAAATGCAAAACTCTCAATTTGATCATTTCTCATGTTTGTA AAAAAGTCAAGTCTGAAAAAGTAAGAATGCGTTAAGAATATTTCACCCTC AATTTTGGCACTTTCTTAAGAATACTTGACCCTTATCCAAAGTAAACTAT TCTTATAAAAAGAAGCGTGTAATATTGGACAAATTTAAGAAGAAATTAAT CTTTCTTTTCAGGGAAGAGCCGAAGAAAAATCCAGAATTTCTTTGCAGTG TATGCATGACACCTTACAAAGTTCAAGACGTGAGTTATCTATTTCAGTAT TTTTTATTGCGTGCAGAAGGACTGGTATAACTCATATAGATTTCGATACA CTCCTGGGTGCCTTGATTTGAAAAATTGCAAATTTAGAGATCTTTCAAAT TCAAAACGCTTCTACGAAAGGGTCGGCGAGGTAGTTAGACTGTGTGATGA TAATTTTCTTTCTTTGTCGGTATTTGAAGAAAAGTGACGATGTTTAGGTG TCAAACGTGTCATGTGTTGACAAAATAATAATTTCTGCAATTCTTCACAT CTAAAGTTGATAAGAGTAAGAGTTGCTACCCACCTAAAAAAGTTCTTTAT TTTCACTTTTTCAGAAAAAGTCGGTAAAGTCCACTGATCGTTTTATACAA AACACGATCAGGGTTCATTGCATGCAAAAAGATTGTCCGTGGATTGGTTC CATCAAGGATTACGAGGTAAATTCACAAACACATTCTTTTTTATTTTACT AGCCATAACTTTCATTAATGTGCCACCGCAGCAAAACGAACACATAGAGT TGAATTTGCGTTCAAAAGGAATGATCTTAGCCCTACAGTAATTTTTGTTA AGAGCGACCTCTCATCTGAGACAAAACTCTTTCAAATGCTAACAAATGTG TCAAGGGAGTGATTTACAGTCTACTTAGAGTGACATCCGTGCCTTGNCTC ATCTGAGACAAAATTCTTTCAAATGCTAACAAATGTGTCAAGGGAGTGAT TTACAGTCTACTTAGAGTGACATCCGTGCCTTGTCTTACACGTTTTTTAT AAGAGCAATTTCATAAGAATACGAGGTTGAAATTTGGCCAAAACCTTAGA ACAAATTAAGAAGAATCTGAGCCTCAGATTTCAGAAATTACTGAGAAGTA CAGGTTTCCATTCTCATTAATATTGACATTTAAGCCTGAAAAACTCATAT AAAATTAAGAGCAGCCCAGCCCGAATCATATGACTTACTGGTTTTTCCTT TAAAAAGCGTATATCTGAAGATACTGCTCTTCATATGTTATTTTACTCTA ATGTACACGTTTAACAACATAACTGTTCGAGTACTTTGAGTAGAAGAGTT ATATTTTTAACCTATGAAGAGCGCTTAATAACTACTTGTGGTATAAAAAG GGAACTTCCCAGAAAAGAGAATTTCCTTAGATTCCTTAACTTTCCAGGGA TAAGAAAAAGACAAACTGAGATTTCAAAATGAGTAATCAGATGAAAATAA CTCCGAAAAGTCTTTTTGATAATGATAAAACTATAGAGAGACCGTAAGAT AAGAATGCTACCGTTAAGCGGAACTTATATACTGAAAAACGCGCGCAAAA ACAAACGCAAAATTATGAGATGTTTGCCCAACTTCCTTATGCGTAAAGCT ATTAATGCCATCCTCGGGAGCTTTAGGCTCCCTGCGGTGGCAATAAGAAC CATTTTGTAGAGGCTCGGCTGTTCTTAAACTCGAAAAACTGTTTATCTTC TCTGCCCTTTGTTCCTTTTGCTATGACACAAACGAATTAAGACTAAGGGC TCTGACCATAGTGAATTTTTCATAATTACCATGTTTAAAATGTGTTTTCT GACTGATGTAACCAACAAAACTATGGCATGTTATACATTTTCTGTTAGAC AAACTATTCCTGAATCTGAAAATTCAAAAATTGCATTGAAGAAATTTGAT GAAGAAGAAAATAGTGGTTTTTCATCAATTCTTCATCTGTATTTTCCTTA AAAAAACAGTCATAACTTTTGACACATCTTTTTAGAAAAACTTTCCGCAA AATTTAAAATAATTCAATTCTTTGCGGACAGTTTGAAAAAAATTCCAAAC AAAAAGGTTAATTACCCATTAAAACTTAGCACTTTTTATAAAAGAAGGTG ATGCAACATATTATTAACGTCTTTTTAAAGTTCATAACGTCATTTTTGCA ATTAAGTTCTTAATTACTCTTGAGGGGTTTGACTAAAAAGTAATTTATAA AGACAATTCTTTGTGAAAAGTGTTAAAGAATCTAAAACATAACTTTTATG TTCAGATACTAAAATCAATTTTCTGACTATGGTCAGAGCCCTTAAGGCCG GTCTCCACTTTCGCGCGACATAAGCGAAAACTTTTTGACGTTTTTGTAAG ATCATTGGTCGGTTGAAAAATGAAGCAATTCCATTGGTAGAAATTGACGT TACGGATGAAAAAAGTAGAACTTCCTTCATTTTTTTTTTGATCGCGTCAA ACTTTTTTATGACGTAATCTTTTCTTCAGGCAAAAAATGCTAGTAAAAAA AACGGTCGCCCATTCCGCGCGAAAGTCCGGCCTTTATATCCTTTTTTATT TTTTTAGGTTCATGTTAAGAAATGTGACTATAATGGCAAAATAAAATGCC CATATTTCGAGTTGGGTTGTCTCAATACGGTAAGTTTTCTTTCATCGATG AAAAGAAAATCTTTTCAAAGAAGATTCTCGGAACAAATTGGTTTTATTTA TACATTTTTATTTTCAGAATTACAATTTCAGCAATTTTATTAATAAAGAA ATTAGAAATCGCATTTTTAGTAAAAATGGCCTCCTTGCTAATTTGAACTT CTGTTAATCGAATTTCTCTATAAATCGAACTAATTTTCCCTGTCAAGGCG AGACCTTCCTAAATTGCTTTCCATTCGAGTCTCTGACAAATTAGATTCTT TGAGTTTGAATTAGCGAAAGTCAATTGTATAAAGAACACAAGATTTGAAT AAGTTGTTTTCACTTCAATTTCTCCAGTTTCTATCATGTTCGTCATCTCT TATACATTCCGTTTGTTTTTAGTTCGAGGTGCAAAATTTACCAAAACACA ACGCAATGAATCGACAAATCCACGAAGCTTTGCTTTTGAACGTCGTAAAT GTGTTGGCAAAAGAGAGACTAGAAAATCGAACACTCTTCGAAAACCAAAA CAAAACAATCGAACGTTTAGAAGAAAGAATGGACAAAATTGAAGTAGAAA ACAAGGATCTGCTGGACAAATATGAGACCCAATCCAATCTTCTCATAAAA AATACTAAGGAAATCGAATCGTTGAAAAATGAAAATGCAAACTTAAACCA AATGCTTCAACAACAAAATGACAATGTTTTGAATATTCATCAAAAACTTC AATTATTAGAAAAGGAAAATCCTAAAGACATTGAAAAGACTTTAAAGGGA CAGAGAAAAGATGTTGAAAATTTGAAAACATTTGCAAAGACCGTCGGTAA ATTACATGGAACATTGAGTGACGTTAATGTAAGAGAGAATTTTCGAATAA AAAAGTACCTTTACGATAAAGATTATATAAAAAATGGAGATGCAAAACAA TGGAATGATTTTGTCCAACAAATCAATACAAACGAAGATTTCAATGGAGA TTGTAATTACCTTCAACAAATGAAAAACGATGTGAATCGTTATCAAGGTA CTGTATACTCAAAGTCTTGGAATACAAGGTTATATCAGTTTGCAAATGCA ATTGATCGAGGAGTGATGATAAACAACCATATAAAACTTTGTTCACCTTA CATAGTGAAATACATCTCCGTTATAGATCACAACACCTACGATAATTTTA ACAGGACAACTCGAGACATGAAATGGACAAAACATTCACATGATATAGCA AGTTATTCGAGTGGACATCAAGGTTCATGGTGTCTCAATGTTGCTGTCAT CTTACCACCTTGGTGTAAAAACGTTTACATTCTTCATTGGAACAAAGAAG ACAAAAAGTTGAAAATTCCACTCAATGGGACAGTTGTATCTTTGAAAGGA GATGATCAGTATTGCAGTGCTTTTGTCATGTTACAAATTGAAGAGTAAAA CAAAAAACTTTGGATGTAAAATATTTATGCTCGTGGTGTCTCAATGTTGC TGTCGTCATGCCACCTTGGTATAAAGGGAGATAAATGGTATCGCAGTCCT TTTGTCATGTTACAATTGGAATAGTGAAATAAAAAAACTTTCCATGAAAA AGGCATACGGTGTCTCAATGTTGCTGTCATGTTTCCAGATTATTTCAAAA TATTTCTAGAGGAAAAGAGGTTTTACAAAAATTTTTGCTGCATAAAAAAC TTTAACATCTCTACTTTTTTTCCAGGAAGTTCTTTTTCAAAATTTTCAAT TTCAACAATATTTTTCAATCGCTTAAAGATAGGTAGCTTTTTTAAATGGC CCCCAAAACGGAGGTTTGCAATTTTAGTGATTTCTCGAGATATCTTTAAG ATATGAATACAAAATTTTGACCATAGTTTGGAAATGTGATTTAGAGAGTT TTGGGCATAAGTTTGTTTGATAAAATTTTTACAGTATACCCCTGGTTGTC AAAATGCAGGTTTGGGGCCCCCAAAACGTAGGTGTAGTTAAAATCAAATT ATTAAGCCCAGTGGTAATAGGGGGGAAAACTATGAACATATTTGTGTTTA CCCTTAAATTTACGACCCGATGGATGTAAAATTTATGATTTTTATGAAAT ATTTCAAGATTTTCGATATTGGGCTCTTCCAGAAAAAATCCGTTCATGGG GGGTGGAGGATATATTAATTTTTTCATGAATTACCCCTGGACATTTTGAT TTTTAACCCCCTGGACATGGGTTATCCCCCTGGACATTGCAATTTTTTGG TATTTTTTCAATACCCCTGGACAATTCATCCTCCACCCCCCATGAACGGA TTTTTTCTGGAAGAGCCCATTGCAAAGTCCAAACTGAAATTTTAGAAATT TTCAAAATGACAATTTTGATTTAACAACGTCTTAATCAAGTTTCTGAAAA CCAATCTCTTTTGAAAACAGTTCCATTCATG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00012132TCONS_00012132Clytia hemisphaericatranscript
TCONS_00012131TCONS_00012131Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00012132-proteinTCONS_00012132-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000137supercontigsc0000137:512037..517917 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.53 1.9 2.34 2.84 6.99 6.18 7.43 7.55 4.52 5.09 5.16 4.32 8.84 7.88 11.67 12.65 5.17 7.29 11.61 11.32 5.93 5.65 4.19 6.6 11.4 11.35 5.24 5.85 19.39 17.86