XLOC_006817 (gene) - C. hemisphaerica

Overview
NameXLOC_006817
Unique NameXLOC_006817
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000137:401018..411090-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006817 ID=XLOC_006817|Name=XLOC_006817|organism=Clytia hemisphaerica|type=gene|length=10073bp|location=Sequence derived from alignment at sc0000137:401018..411090- (Clytia hemisphaerica)
ACGGTACTTTCAAACAAAAAATATATTGACAATGAATGGGTAAGCTTTCT AGAAATCCAAACATACATACATCCAAACATGGTTCCCTCGCTCATATCAA GGCGGCCCGGGACGGGGGTAAGAGAATTAAAGTTTCTTAAGTAAAATCTT AATTATCACCCAAAAAGTGCCTTTTTTACCATTCCTTTAAGTAGATAGTN CCGGGACGGGGGTAAGAGAATTAAAGTTTCTAAGTAAAATCTTAATAATT GTCACCCAAAAAAGTGCCTTTTTTAACCATTCCTTTTAAATAGATAGTCC CAGCCTTATCCCTCCTTCAGTAAAGCTTTTTATACCTTTCGCAAGTCAGG AATCTCACGTGTCTTTGCAAGTTTTCATTTCCCGAAAATGGCCTCGCAAA AGTTAATCCGATTAAAGTGATGAGAAGTAGTAGAGAAGGAAAAGTTGCTA TTTTTGATGAATTTCTTGAATCCTTGAAAGTTTTAACGATTTCCCCTGTT ATTGTATCAAAACTGTCATTGATTCAACTTTTTTTGTATTGTAGGCAAAT TAAAAAAAGACTTATACAAACAAAACGAAAGGCCAATCAGAACCATCAAT TATGGGGAAAGGGCGTTTTCCTTTCCGAAGAACAGTAGAATTTTTGAGTG GCGGCAAATTAGTACTTCAAAAACGTGTCAAAACCGTGGCAGTATCGTTC ACAACTCAAAAAGAAAGCAAAGGATTAAGGTACATAATTTTAATTCTATA TTGGGCTATTCCAGAAAAAAATTGTATCCCCTATGTTGAGGAGGTCTTTT TTTCAAAGTGACCCCCTGACTGGATTTTTTCCTCCACTTTTTCAGGACCT CCTTAGATTTTTTTCTCTCATTTTCTGGACCAGCCTGGATTTTAATCCTC GTTTTACTGACCACCCTGGATTTTCAACATTATTTTACTGACCACCCTGG ATTTTTTACGTCCAAAAAACTAGACCACCCTGGATTTTTATTTTCCAGAC CTCCTCAACATAAGGGGTACAAACTATACTGGAATAGCCTATTTTACAGC TGGGTGTCCACTGGAAGGAAATTTTTTTGTCGCAAAAAATGAATCCTTCA ATTTATTTTTGTCAACAGGTATTTCCTACACACTTACTTACTTTCAGTAC CCAGCTCAATAGTAGTGCTAGTATCATCATCTCAGATATCTGTACAAACT GAAGGGCTAGATATCTTGTTTCAAGATGTGTCCTGAAAATGTTAAGCCAA GTTATGACGAGCTTTAACACGATTTGATTGATTGATTGATGATTGATTGA TTGATTTGAGCCTTTTTTCTTACAATATGTTTAACTTAACTCAAAGATTC CTTCCATGGTCCTTTTAATATAAGCCTTCCTTCCTTCCATGGTCCTTCTT AGTAAGTCCACCAAATATTTTCAATAAATAACAATAACATCCTCAAGAAA ATTTAGAATTTAAGATCTTCGTACCTCATTCGTACCTCCCGTTGAAATTC TATTGTTTTCAAGTAGAAACTAAAAATTACAAACTATCTTATAACTAGAT ATCAAATATCTTGACTGTAAAAAGCAGGAAGCCAGTAAAATTTGGAGGTT CTGCTTAGGACTATGGATGGAAAAAATCTTTTGGTTAAATTTCATTTTTT ACCTGGTTAACAAGATACTTGATTGAAGTAAATAAACGTTAACTTGTCTT TTAGTCGTTTTATAAAGCTTTCATTTCTTTGTATTCATGGCCAACAAATT GAAGTCGTAATTTACATCTTCTTTTATATTTGCAGGGACTTCGTACTAAG GGACTTGCCACAGATACAATACAAAAACCCAAACAAGCAATTTGTCTGTT TTCGAAATCGACACGAATTCCCACACATTACATTGTATTATGGTAAGCTG TTTTGCCCACTATCCACGTAGGCTTGGGGTGGGGGCTAGGGCTGGAGAAT GTTGAGCATTGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGTGGGGG CTAGGGCTGGAGAATGTTGAGCATGTATGAACCGGACTTGTCTGTACAAA ATTTTCAATCTCAGCATGGTTCTTAAAAAAAGAAGCCTTGTGATTATTGT GATTAAAAAGTCTTATTTGTAAATTACCGGGTTTCACTTTTCTACTTTTT ACCTTCTTACATCTTTAAAGGTTTTGTTTTTAAATAAGAGTGATATCGTT TGCTTGCTTACTCATCAATTTTAATTCACAAGCTTTTTCATATTGGATTG ATACGGATGTGGAGAAAAGGAAAAGAAAAACATTTTTTTGCTTATATAAT ATAACAATAGCAAGACACTGTCCTGATATGAAACATGTGTCTGATATGAA ACGGGAACACTTAAATGTAAAAATAAAACCTTTAAAATGAATAAAATCCT TTTGATTTTAGATGGTGGTGAAAGGCAACTGATCGATGTTTACCAAAAAT CTGCCGATGACATTTTGAATCTGGTTGAATTGGCAGGTGCTGCCACTGAA AGGTAAAGAGTAATATTTTTAATCCAAATTTCGTTCCCTACCATCAAGGT AATGCGTCACCAATTATACATTTCTGTCTTAGAAGATCCAAAATTGGGTG ATTTAAGAGCCCCCCCCCCAAGCAGCTTGCGTGATGACGTAATAGGGACT TTTTTGTAGCGTGCCACGTGATTTGGAATTTTTTTTTCGTGATTGCGTGA TTAGAGGTCAAAAATGTGATCGTGATTTGAAAAATTTTTGAGCCATGATA CGTGATTTGGACTTTTTCAAAGGGATGCGTGATTATGCTGATTTTCGTGA TCGAAGACAAAAAATTGCGTGACCGCTTGGGGGATGCCTCATTTAAGAGT CTTTGAAGCCTTAAGACTTTATTTTATTTTTTCTTATATAAAGAACGTAT ACTACAGCATTCTCCATGTTTTTAAATGAAAGGTTTTTACTTCTTAACAA TTTAAAAACAATGTCGAGCCTGATATTACTCAATTTCAAGCAATATAGGG GTCAAAGTACTTTAGGCGTACAAACTTTCGCGAGCAGAAACTTTCGCAAG GTCGAAAAATCGCGACATTTACTTTCGCGAATTTGTGGAAAAAATGTTTT TCGCGAGCATAAACTTTCGCGAATCGTTGGATAAAAATGAGAATTTTAGA ATAAAAATAGCCTTAAAAGTGAAAAATATTCCTTTAATCTGCTAAAGACG GTTACTCTTCGACTTTACAAAGGCATTAAAGGATGATAATATGTCGAAAA TTTGATATTTATTACGATTTCGAGGTTTTATGGATTTCCGATTTTTTTGA GAATTTTTCGCGAGCATAAACTTTCGCGAATAGCCCTGCTAGGAATTTTC AAAGCATTTACTTTAGCGAAAAAGGCCAAAATTCGCGAAAATCGCGCGAC AGTTTCTGTTCGCGAAAGTTTTTACGCCTAAGGTAGTAAAAATTTGGTAT AACGCCTAAAATACCTCGCTTACATCCAAGCTTATAAAATGCACAAGTGT TCTATCAAGTTCACAAATTTCTATGTACATCTAAAAAATTAGCTTTTTCG GGGCTAATAATCGAATTAAAAACATTCTAAAAACATAATAAAATGCATAA AAATCTACGTCATTCCAATTTTGGATAAAAGTAATTTTGATGAATCTAAT TTGTCATAAGTCCTGGTTTCTTTAGAGCAAAAAATGATGCTTCAAGATTT TTATGAGTTTTCTAATTGTTTGGGGCATCGAGGACAATTTTCATTGCACA TCGAACGAAACTTATATTGTTTTATCATATTGTACCGTCTGTTCTAAGAA AATTGGCAGCTCGCATATTTTGATACATTGCTCTTGAAGGAGAAAAGATA CGATTAAAAGTAATAATTCGTTGAAAAGATAATCTTAAGCGGCTGATTCT AAGACTTTAAAACCTTCAGAGAATTTCGAGCCCAGTAGAAAAATTTTTTA TCTGAAAACATATTTGAAATCAACGAAGTTTGTAGTTTCAGAAAAGTATA AATTCCAAATCTCTGGTCCAGTAGTAGACGATCCTATCGTCTACACAAGA TCACTAAAAAAGGGAATAGTTTAGGAGAGGCGTGATAAATTCGGGTGGAG TAAGCAGTGGCGGAGATGTTTACANNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNCTTCAGAAATAATCACCACAAAGA CTAACAGGTTTGTTGTTAATATTTTTTACTTCCAACCTTCATTTTTCTTC TTTTTAACTACAGTAATTTAACTCAAAGACACAACACTTGCTGTACATTT AGTATCATTTTACACATTTCCCTTCTGATAAAAACAGCCTTTTACCTTCT TTTCAATACTCCCTATTTTTGTTTTGTTAGAAATTCTACAAGTTACTAAT TTTTAACTTATATTTTTTATATTTGACATGTTCTGTAGTATAGAAGTATA ATTATAGCCACAGGAAACATTTTGAAGTTTTTAATTTTTGTTTGTCTGGA AGATGGTATCAATTTGAAGGTAGACTATGTGCTTCTGGCAGCTAGAAAAG AGTTTTATTCTGATACAAAAAATCATTACAGGATAGTTTGACAATTGAAG ACAATTTGTTTACAATATTTTCCACCATATTCTATATTTAAAGATAATTA TATTCTGGCCTTAGGTGGAAGTTGTAGACGTTCATGGTACAGCAAGATGC TGTTATTGCTACCATACAATGCTACTTGAAAGTCTTATCCAAATCCCAGC TGGAAAAAATGATTATTTTCTCAGACATATCGTACTACTTATTCTACAAA TGGCCTTTCAATTGCTTTTAATCGGCTGATTGGAGTAAAAACTGAGCTTT TTCAGGGTTTCGAGAAATTAAACCAAAAAATGCCAGAACAAATTCTCACC CTAATTAAAATCCCTGAAGTAATCTCTATAATTAAAAATTTATTTTTTTC TGATTTCCTATATAAATTTTAAAAAATAAGGATAAAATTTTAGTTTTAGT TCTGTTTTGCTAACTTCTTTATATAAACATTAAACTGTCTGCTATTGCAA AACCATATTTTACTTATTACCATATTAACTTATGTAGCATTAAAATTACC ATAAATCCTAGAGCACTCTTCAAATTGACTTCAGATCTGGTGTGTATACT CTCTGTACAGACTGGAAGAAATTTGCAAATAAAAAATGCCCAAAAGATAC CCCAATCAAAATCTTGTTTTTTCAGCAAAGGGCGACAACAGTCAGACAGT TTCTTTTTTCAAACAGCTAAATTTCTTGTTAAAAAATTGCTAAAATTGGC ATAATTCTGGAATTTTTTACATGATATATAAACATTCCTTTGCCACACAA TTCACCAAATTTTGTTTGAGATATTCATTCAATCTGAAGTTATTTATAAA AAAATATAAGTCAAAAAATTATATATATGAAATATTTTNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNCATGAAAAATTTCAACCTTTCACACCGTGAATTTGCCAAAAAATT ATGATGACTTTTAAACGTTTTGTTTTTCATGTACTCGTACATCTGGAATT AACTGAATATAGACTACGTTCTGGTTCAATTAATTGCCCCTACCTAACCT AAGATTCACCCTCTTTTTATTTTTCCAGAAAAATCTCAAAGAAGCTTGTC CATGTCCATTGAAGTGGCAATCTGAACACCCAATAAATAAGAAGAATTAG AATTTGTAACCCCAGTTCTAAAAGGTTCTATTCCTAGAAACTTGGGAAAA TAAATTACTAGATTTGAAACAAACATGAAAAAATATACATGAAGGAAAGT ATTTTCAATCAAAAATCAAAAAGTAGTTTGAGGTATAAAGTAGTTGAGAA TAGAGTGAGAGCTCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGCCATTT TTCCCGCCTTTATTATCACTGTAAACGGACGATAACATCGTCTAGTCCAG TAGAAAAAATCTTATTTTTTTCATCTTAATTTTCGGACCTACCTGGATGT CCTATAAATTAAACTTTTTTCATCCTGATTTTCGAAATTTTTGAAAGATT TTGAAGTCTTACAATCATCCACTTAAGATGATCTTTTCAACAATAAGGTA ATACTTTCAATCATGTCTTTTCTCCTCCAAGAGCAATGTATCAGAATGAT GTGCAGGCTGCCAATTTTTTTTGGAACAACTTTTACTGTCTAAATCCAGT TTAGGTTAATTTGTTTCTTATTCCGCGAAAATCGTCCGACGAGGATGGGA TTCGAACCCACGCGGGCAGAGCCCAATGGATTAGCAGTCCATCGCCTTAA CCACTCGGCCACCTCGTCTTGAAAAAATTGCTGAGAAAGATAGTTTATAA ATTGAATCAATAAATAATTCATTGGTTTCTAACGTGTCAAATTGGTTGCT ATGTGNTTGCTGAGAAAGATACTTTATGAATTAAATCAATAAATAATTTA TTGGTTTCTAAGGTGTCAAATTGTTTGCTATGTGAAATTTACTAAATCCT TTAAAGAATGTCATCTTTAGATAAATACTGAAAGTAATTCAAAGTACTTG AATGGCTTGAATCTGATAGACTAGGGTCTACTTTGAACAAGATGGAGTTT TTACAAGCTCTTATGTGATTTGGTTGGTTGTTAACCAGTAATAAAACAAT TTTGTTACTTTTCTAAAAAACGTGTCATTTTTATTACTTCAAATGACCAA TTATTAAGATATCTTATATTATAAAAACTCCATCTCACCTGGTCAGCTTC TGGCTGAACTTTGCTTTCCAATAATTGATAAAGTTTGATGATGCTGAGTC CAGTGAAGTAGACTAGGTGCACATGACAAGAAATTGCAATCCCCTTTTTT CAAATAAAACCGTTCCTTCAAGCTATTTTTAAGTAATAGAATAGAGTACG CGCTATCATAGTCATTATAAAAAAACACTGGTCTGGCAATGTATTGTTTT AGCTTTATTGTCGAATTTTCTTTTGTTATAAATAAAAGGCAAGTTGCGAT TTGCATACTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAA AGTATGCAAAATAAAGTCGATTTGCGAACACAAGCTCTATCTGTTAACAA TAGAAAGAAACAAAAGCCTTCCAGACCGGGGTTTTTTATAATGACTATGG CGCTATCTAGTCTATCAAGTGGCTATTACATTGTTTTTGTTTTACAACGC ATTGATAAATATATATCAAAAGACATTCTTGATGACATTCTATCAGTTGT CTATGAAGGACTATTAACCCGATATTGCAAGTTTTGGAGATGTGTGCTCC GTTTTTCTTGTTCCGACCTTATATACCTCTCTATCGACTTTCTTTTGGCA ATTCTTATGCCTTATGGCTGATACTTTTAAGTTTGAAAGTTCATTTTTCA ATGAGAACTCTTTTTTCTTTTCATTTCCAGTGAAATTCTTCAAAAGCAAG AAGTAGAATACCCTGGTCGTATCAATCCGGCAAACTTCGGCAAATATGGA CATTGTTTTTGCATTTGTGAAAAACCAGGCCAAGTACCATGCCCATCGAG AGTGAAATTCGATAAACCAATCAAATGGTGGCACGATAAAGAATCAGCAG CACAATAATCCAGTAAACATTCAATGAACAATTTGCGATATTTTGGGGGA TGTATCATCATAGTCCCCTGTAGACACGAGATTCTCAGGAAAAATGAGCT GATCACTTGGGTGTGGAAAGTGCATTTCACATATTTCACATTCATTTATG ATGAAGAATTTAAAAATTGTTTGGGTAATACACCATCATAGCTGCCTGTA GTCATAAAATTCACAGGAAAAATCAGATCACTTAGGCGTGAAAAGTGTAT TGCACGCTTTGGAACATACAAGAAGTTCATCCTGGTGGAAAAATCATTCA CGTTTCAAGCACAGTCTGCACACAACGTTGTTTCAAGGTTTATCTAACGT TCACAACGTCCATGAACGTTGGAACAACGTTGTGTGCCAACTGGGAGGTG TGAAATTTACCTTTCCCATCCAGGGAAACGATCTGCTCAATTTTCATGTG AATCTTGTGTCAGCAATTAACGAAAAAGAGTTTTAGTTTTTCTGACGAAG TTAATCTACATATTTGCGGTGGTCTGTAAAATACACACCGAAGGGAGTTG GATTGGATTACGTGGAATGGTTCTTCTATACGACGATCGGAAACTAACAA ATTGAGTATACGTACATTCGATGATTGAAACATGATTGAACGCGTGTTAT GTTGCGAACAGCGATTTTTTAAGTTGCATATTTGGATTCTTTAAATAAGT GGCTCAAATGAAATCTTTGACTTATGGTCAAAATGATAGATATAAATAAA TGATAAATTAAAATAAAATTAGATAATTGTTTTACTGACAATACTTAAGG GGGGTGGGTTGAAGTCAAATTGTTTTTAAAACATTTCCAGATTCTATTTT AACCAGTAATCTAAATCAAAAATTCAAATTCCTTGAAGTCCCTTATTTTG CACATGATTTGAAAATTCAACATATACCCCTGTCTCACAGAATCGGTAGA ACTTTTTCCCACAGCGGGGGTAAAACCCCCGTAAAAGCCCTATCGAAATC CCAAAAGAAATTCTATAGTTTCAAGCTTAAAAAATGCAATAAGGATGGTT TTAGAGTGCAATTATTTTTTTCTCCCACAGAGTGCCCTATTACTACTTTC CTTAGTTTTATTTTAAGGCGAGCGAATTTTTCATTTTATCTATGAATTCG AGCCGAGCTTTTTGTGTCTTTTTATCTTCTATTTCGCATCTTTCTCAAAA TGTACCGGGTGACCCACGAAAATGTATAATGTATAGTTTGGAGGGTAACT GTGTCCGAAAAAAATGACTTTTTACCTCCATATCTCGATAACTACTTTTC CAAAATAAAAAAATGATACATCAAAATTAAGTTTGCTTTTCCTCTTTACC ATGAAAAAAGAAATTAGTTAAAATTCAATTTTTTTTCGGACACAGTTACC CTCCAAACTCTTATACTTTTTTGTGGGTCACCCTGTAGTAGTTTTTGCTG CCTTTTTAGGAGGTCTTATACTTTGATCGTAGAAATTCTAATTTTAGACT AATTTTAGTGTATATTAGCGAGTCAGGAAAATCTTGATTTTTTTGGGATA TATTTTAGCGAATCACGATTTCAAAAAATTTTGCGTGGATAAATTTTAGC GAATACTCGTATTACATTATTGATAGGAAATTGATTGAATTCGTTTTCTA GCATTTCTTTGCACTGAAACCCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00012124TCONS_00012124Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00012124-proteinTCONS_00012124-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000137supercontigsc0000137:401018..411090 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
MRPS2528S ribosomal protein S25, mitochondrial Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
20.49 21.93 20.92 20.47 18.04 14.46 21.06 22.1 19.51 17.29 15.54 14.82 12.09 9.94 10.92 10.36 21.43 20.69 5.04 7.91 17.05 17.31 16.94 18.37 18.86 22.33 7.81 6.01 10.7 9.76