XLOC_005773 (gene) - C. hemisphaerica

Overview
NameXLOC_005773
Unique NameXLOC_005773
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000104:458300..466568+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005773 ID=XLOC_005773|Name=XLOC_005773|organism=Clytia hemisphaerica|type=gene|length=8269bp|location=Sequence derived from alignment at sc0000104:458300..466568+ (Clytia hemisphaerica)
CttttagcaaaaataaaaaagattgaataaatatttaaaaagaatgTTGA GCATACAAGACGTATTACGACCAAACATTATCAACATCAATGGACGTCGT TATCGACAGCTTCCAATCAAATCATTGAACAATGAGCAGCAAAGTGATTA CACAGAAAATCTGGCTTCCTATGTCGAAGAAGGTAACTTTAATAGTTTAG TTTTCATCTCGTCGACAAATGTTCTTTGTCCGACCTTACTCCCTTTTTTA CAAGCTCCGACAACCGAGCTTTTTTACATTCACGGAAGAagtttcagagg gaatttaatttggcggatggtgtggttcaaatttaaaattaatgtgaaaa tgttcaaaatagcTCCTTTTATGACCcaaattgtgaaaaattgagcaaaa tttgataaaattttaatttggagggaatttaatttggtgggtGGCgggaa agttttaattttttgggaacttaatttggcgaattttggccaaaaccgcc aaatccgccaaattttcttcctttaaggcaTTTTCTTTGACTTCTTTTTT ACTGATTATGAAATGATCAGGGCTAAGTTGCAGAAATCCAACTCATTGAA TGTCATTCTTAGAATTTGTTTGAAGTAATTCctgcaaaatgtcattttct aatttattttcaataattttttcatagaCACGTATTATGACGAACCGAAC ACTTGCTCAAACCAACCAGAATGGCAAGTCGAACAGACACACAACGGTTA TGAAATTGTCATTGAAGACTTACCCATGTTTTATTACAAATTCATAATTG GTAAAGGTGGAAGCAAGAAGAAAGAGATTGAACGTTCTAGTAATGCATCT ATTAAACTACCACCAAAAGGAAGCCAAGGAAATGTGAGTAAGTTTCTGAT TCAGAATTTAAACCTTTATACCTTAAATCCTCGAgtaagcgccccgcttg aataagcgccctgctcaaataagcgccccccttttagttaaaataatatt ataaccGCCCCGCTcaaataagcgcccccctttgaataagcgccccctcc AGGGAagggcgcttattcgaatttTGTTATAgattgaataagatattgag tagatacttgtgtcttaaaaagaaagaaagcgattaagaataaaatgata gaaattatcaattggatttttctaatttttcttttattcgtgcttttttg aaaaatcaaccctttgaaacagctaagtttaagcagattccgaatttgtt gatatacgaatttctgaaataaaaaaataagcgccccgctcgaataagcg ccccccttagagcctgaaaaattaaataagcgcccgggcgcttattcgag gatttacggtagTAACTGGTGATTAtaagtcaaaatttggattttggtaA TTAGTTATATGCCATCATTAATTGCCGCTATTAATTGCAGTCATTCAGTA ACTTCAAATTTccaaatattatttttgatttcaaatgagAAAACACGCCG AGCTCTAGTGCTTTTTTTGGGTGGGATCAAAAATAGGACAACATGGGTCG TGTCCAGTACTCTAAAAAGATTGATGTCAGTGGTACTCTGTTCGACTTTG GACCAATTACCTGGCTTTGGACTTAAACATTCTGTGCAATTAATCCGATT CTACTATTGATATTGCAAATTTTAAAAGTGTGAGCCTGCATCAGGGAGCA AATGAGTCAACTTTCCAAGCATTTTTAACATTATAATGCAAATGAATGTC TTGAGCTGAACTGCAAAGGTTTGAGTGTGGGTTAGAAAAATAAACTAGGA GATTTCCGAGTATTTTAAGTACTGTTATGCGGTGcaaactttcatttttg acTGATTTAGCGGGTGGATTTGAAATATGGGTGATATATATCTTCACTAT GATGAGTGAAAGGTTTTTTAACAAGGTAAGATAatgattgttttattttt tgttccaGTAATCAGCGGACGTCACAAATGTGATGTAGTGAGCGGACGTA ATCAACTTCAAACAATCATTGATTTACACCGTACAGAACAACCTGCAACA CATTTCCTTTGTATCGCCCTTGACGCTGACCACATGGATGAGAAGTTTGC AGACTTCAAAGAAAAAGTCCTCGAACTAAACGTTTGTATTTATTTGACCT ctatcaaaatatatttatcCTGACGCATTAACTTTGACttagtttaattt ttaattggtcagccccggtgacccttcaaatccctttcacgatttttttc ccgGAGGTCGTCGTCAAGACTTTCAAGTTTGAATCCGATTTCGGATTANN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNgaaaaatattttttcttggaagagaaaagaaacacataacttcat taaaagatttgcgcataataataaaagaacactataattaaaaagaagaa agtgaaaaacaattttttttgtttattcaataaattgaaagaagctattg tattgtaaataaatagagggtgtaaaagaaagttttttatgattgatttt gaggctttcttgtctggagagtttttggacctaccccggtggaggtccta taaattaacctttgtccgtctgtccgtccgtccgttagttaccagctttt ctcatgattggctcattagttttttctgattttttgcacaatgatgcaaa atggcaatgcccaaaatgtgacggagcctgattttcgaaaaaaaaaattt ttgggcaaatttgaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNagaaac aaacgactaattttaatagatcgtcactatttgtgttctgaatgattgtt taatggtcacgtcacgtagatatcaattataaacgtgttaaatgcacaat ccaggtaggtccatcaaagtatcacttgttgtatGTAAGAAAGGAATGTC AAAGTGTGGCGTAACATAAACTTAGAATCGTCATAACTTNagcattgtaa ataaatagagggtgtaaaagaaagttttttatgattggttttgagGCTTT CTTGTCTGGAGAGTTTTTGTATGTAAGAAAGGAACGTCAAAGTGTGGTGT AACATAAACTTAGAAtcgccataacttttgattgcgttatcgaaactgga cggaatttCCTAAGCAGCTTCCTCAATATAAAATGCCCCTATTCATTCAC ATTATACTAGGTTCAACACGCCatttaaatcaatctgaatcaattgACTT TGTGATTACTAGACAGCTAACCGTGCCCCGGGGGAGGGGNATCTGAATCA ATTGACTATGTGATTACTAGACAGCTAACCGTGCCCCGGGGGAGGCacct taggcaaaattgggtacggggacgtgccactTATCAGGAtttctttttta ggctctgaagatatctgacaggttcccaaatttactaattttcaagttGT GTATCTGATAGGgtcgattttttattattttggacaattttttaggatgg aaaacagaaaatctttcaaattttcgtctacttttattttcaaggcgaaa ataggaaaaattttgaatttttcgttttgacaagtgccccccccccccNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAATTTTTAGGATGGAAa acacaaaatctttcaaattttcgtctacttttattttcagggcgaaaatg ggaaaaattttgaatttttcgttttgacaagtgccccccccccggaaccG TGCACACTCAACTACTCAACTATAAACGAAGGGCGGCCTTGACTggatag aaaaaaaatcaacataaaaatgccaaaaGTGAACAAAACTGACGAAAGCC GCAGTGAACATATTATAAAGCGGCCACCTCGGATACTTTCTCAGAGAATA AAGAACAGGTTTAAGACATTCTAACGAAAAGATTTATGTGAAATTCCAAG GATGAAATAATCCGATCACATCTCTGTCTGCTTTGNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNAATTCAACtttgtgttaaacttttttt tgtctgaagttcaaccaaaatgagctttttaacctctttggctttaacat cgaattaggtttcttgattgtacttccttctaatcgttttaagcttattg ggctgaccttccagcgcagctggtttatttgaaTTGAAATGCTTTGTAAC AGCCCAAGAATCTAATCGATTGTACTCTAAACTTagtgaaaaaaagaatt gaaattttctctTTCAGGCACGAGGTGTTGATGGCAGTATATTTCAAGAG GCTAAAAGATTACATTTAACACTCTCCTTGACACCTTTCCTGAATGATGC AGAAGTGGTAAGTTTTGTGCTGTTCTTCTAGAAAAGAATATTGACATTGG GACGTTCCTTCCTTGATTTTGcctaaaggttttgttttcttttgttttca cacgcttttttatgagaatatcaggtttaaaattggccaaatcgtaggaa taccctaagaataccctttaagaatttgataagaatacagtcatttcgTA TTTGGTTAAAAGAAGAAACCGATTTTTTTGTTCGACTTGAATTGcaactt tgaggcagaaatataattttgactCCTAATAATGTGTATTCTAAAGTccc aaactctcaaattgatcatttctcgtGTTTGTATGAAAgtcaaatctaaa aaaagtaagaataagttaagaatatttcaccctcaattttggcaatttat ttTAAGagtacttgaccctcatccaaagtgcACTTTTTatgatatgattt tttttcagaacgAATTGCTACCAACTATCAGTGATACCGTCAATCAAATA AAACAGTAAGAATTTCACCTGACCAATTATTCTACTTGGATTGTTTCAGC AAATTATCTATCTTTCATGGTTCTTCCTATTACGATACCTTAATCTATCT TTCCTTGACAGAATTACTGCTCATTTCTAAAACACTCCTTTTCATTATCC CCAAAACAAACTAAAAGCTAACAGTTTTGTAgtagaattatttttttctg tagaCAGTATCTACCTGAAGAATTGGTTAAAATACATTTACGAGGGATCG AATACATGAACGATGACCCTGGTGAAGTAGATGTGCTTTACGCAAAAGTC AGTTTGCCTGATAGTTCAAACAGGTAGGCAAGCTTGTAACTTTGTGATCT TCTGTTTGAGTGCTACCCAAGCGCTTCGCTTTAGCATTCAAGGCAAGCTC TCCCTTGTATTGACAACTTAGTGTTGCCTTATTAagagaattaattttct tcaatAAGTTTACTTTTCTTTGTACTTGCATAAAATGGTTTCCTTTTTCC TGGCCCCTGGCAGATCCTTCTGTGGAAATTTGTCACTTATATCTCTGCTT TCTTACGGGTTTGAATTGTGATGAGACAAACTTTAAGAATAAgataaaaa ttgatatgataGATATTGAAACTTGTTGGTACTTGCTTTCTTTAATATAA TTCTCGTGTTTGGAAAATTGGGTCGGTAGCGAGTGTTTCCCAAGGCGGGA ATCGATCTTAACTTCAGCATTTCACATTTGTAATAatcttgttttctttt cagaCTTCAAAAGTTCGTGGACGAGGTCGTGGATGCACTCTCTACAAATG GGTTGGTTAAAAAACAATACGATCACGTCAAACTCCACGCTACCATCATG AACACTTTATTTCGTGAAAACAAAACACCCAAAGAAGAACGAACGCgcaa tcaaaaattcaaagaacGGGTTACTTTTGACGCGACCAAGATTCTTGAAG TAAGCCTATCTTCTGCAATTCTGTTGATTCGATTGTGTTGCTTTTGTGAT CTTGATTTGTATAGGTGTGCTGAAGAATTTTCCGTTTCGATGGGACGAGC TGAGCAGTAAATTTTATCATAAAACAATAATTTGATTGCATTTCTTGTTA AGAAAAAAGCCTTTCAGGTTTGCTAAGATAGTTCTAACCATCATTTTGAT CTACTAGTATTTGGGATAGGCACACAGACAGATTGTCCGATTAAATTTAG TTTTAACatctttgtttttcttgctAGTTGTATGGTGATTACGTGTTTGG TGAGGTGACTTTCAATAAGTTGGATATCTCACTCAAAGGAAGCTACGATA AAGATGGACGTTACAAAAGAGTGGTGTCCATACCTCTGTTGAGCAAATCG TAACATGAAACAATGATTTGTCAATCAgccattccattaaatttccatac agagGGGGGGGGGATggggacgaaccttttcaagtcaaaaaacatttcat ggaaatgtgtggatacccccttgaaaatgacaaaattagcaaataaaacc ttggaaaatttattttcac
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00010265TCONS_00010265Clytia hemisphaericatranscript
TCONS_00010266TCONS_00010266Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00010265-proteinTCONS_00010265-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000104supercontigsc0000104:458300..466568 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
ASCC1activating signal cointegrator 1 complex subunit 1 isoform a Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
28.25 26.89 43.68 42.74 56.32 41.94 31.77 32.29 19.8 19.85 16.47 14.9 11.69 12.04 16.86 17.23 26.51 23.65 8.54 10.75 15.02 12.82 21.07 17.64 15.03 17.43 11.36 9.38 11.84 11.55