XLOC_004924 (gene) - C. hemisphaerica

Overview
NameXLOC_004924
Unique NameXLOC_004924
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000087:492832..497889-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004924 ID=XLOC_004924|Name=XLOC_004924|organism=Clytia hemisphaerica|type=gene|length=5058bp|location=Sequence derived from alignment at sc0000087:492832..497889- (Clytia hemisphaerica)
ATTGAAAAAGGTAAAAGAAAAATTAAAAACACAACATCGATTTCAACTTC AACAAAATCAGTGCACCAGCAATACATGACCAAGAGAGACAGTATCAACA TCACTTAATATGAAACTTGAGAACGGTAGAATCGATTTGGATTCACCAAG ATGGCCACAAGACACATTTTCTGGCCGTTTTCAACATTTTTGGTCAATCA CTGATTGGAGAAATGGTTTACATTCTGAACAAACTTTAGATGATTCCAAA AAACTTCTTGAGTTATACAGGTATTCTACTGGCAAAGCTATGTATGAAGT ACAATTAATCTCTTTTTTTAATACTGTAAATTGCTTTCCAGGCTTCTTAT TATTTCATCATTTGTCTAGAATTGTTCTTGTTTTTTTTTATGGTAAATGA TTTAATCATATGGTATGGATAAAAATAACAGAAAAGGTATGATACCTCAG CTTTGCGCCTTGAATAAGATTAAGTTTTAAAGTGCAAGTTAACTGATTTA TACAGAGAAAAACTTTCTAAATCATAATAGTTCTTAAAACTTATTTGCAG ATCAGGTCTAGAACCACCAGGTACGACTGAGGAACAGATCTGGCAAGCCA AAAGGTTATATGAGTCAGCATTCCATCCTGATACTGGTGAAAAGATGAAT GTGATTGGTCGAATGTCGTTCCAGGTCCCTGGAGGAATGTTGATCACTGG TGGTATGCTCCAATATTACAAGTAAGGCTTCTCTTTCTTGAATCATTGCA GGCTACGTCATATCTTCCTTAGTTTCGAGCGTAGAACTCCTACTCTAAAA GTAAGGCCTAAAATCCTGTACCTGTCTTTTGTGTAGACTAGAATCATTGT GGATTAATTTCTGATTGTGAACCAAACAGGCACACAATTGTTTTTGAACG TTCATATAACTTTACATGGATGTTAGAGACGTTAGAAGGATGCTGTTCTG ACGTTCGATGGGGATAACTTAACTTAATTTGTTCTCTAAAAAAATATAGT AGTGTCTTTAGATTTTTGTATTCAAACCCGTTGATAAGTCATTCTCTAAA ATTGTCCATTAGAACTGTACCACAAGTAGTTTTATGGCAATGGATCAATC AATCGTTCAATGCTCTTGTCAATTTCACCAACAGAAATGCAAAATCTGAT ATCACCAATAAGTAAGCAATTTACTACCGCTTGCTATCTTCAACCTTACC TTTTTATACCAAACATGGGTTGACGTCAATTTTCTTATATTGACGCTTTT GTAAAACTTCCACTAGCGCGAGGTGGATGTTTTTTTTTGGACAAGGTTTT TTCTAATTAATGAAGGAGAACGGCTGCTATTAAAAAACCTTTTCTTTCGA CAGTCAATTAATTCCAAGTATCTTCCAAGTTTTTAAATTTTGGCTTTAGG GGCGCGTGAACCCCTCCATCTTGCAGCTATTCCAGGATCAAGGTTTCTCT GAAAAATCCTTCTTGTCAAACGGTGTATTTTTCTATCTTTTATGTTTTTG TAGACAAATAATGACGGCATATGTATCAGCAACAAGTGGAGCCATGGCTG TTGCTTTAGGTTTGAATTCACTGGTTAAGGTAAGTCAGCGTTGGAGTCTT TATAAACTGAGACTGAAGTATTGCCAGTTTCTTCCAGGCATCTATGTCTT GCCAGAGATTTCGAGTCTTTCATTCAATATTATAGAGTCAATTTTCTACT ATTACTAAGAATCTTTTCAACATTTTCTAAAAATAGATAACTTTTCAACA ACATTATACTAATAAGCTCAAGGTTGGTTTTCGACTTCTGTACTTTTTTC AAATTACAGCAATAAATTTTCTTGGTCCTTCTTTGGAGTTGCTTAATTTT CCCATGGAATAATTAAGTAAAACATAAACACATATGCCTACCCCTTTAGC ATTTTATAGTAGCTGTCTGATATTTAATCGCCAATTGATTATATAATTGA CACTCTATAATTCGACGTTCTACTACGATATGCTCGTAAACGACGCTATA CTTTTCCATACACTCCGTTTTTCGATAAAAATCCAATTCCCCTCGAAAAG TGAATTATAGAGCGTCAACTGTAATTCAAATTAATCTTTTCTCTTCAAGG CAGCACCACCATTGATGGCCCGCTACGTTCCTTTTGCGGCTGTGGCGGCC GCCAATTGTATAAACATACCTTTGATGAGACAGAGTGAGATTCTGAACGG AATTAGAGTGTACAGTGAAAACGGCGAAGAGTTAGGATCGTCACAAAGGG CTGCTTACACTAGCATTGTACAAGTCACGGCTTCTAGAATCACAATGGCT GCACCAGGAATGTGTAAGAAGATTATCTTTCGTGCATTCTGATAAGCTTT TTCATAAATCATTTTGAGTGTAACAAATGCCTCATTTTGAAGCCATTAAC AAGGGGATTAAATCTTTGAGTGTTACTTTTATAAATAGAGTCAACCTCTT ATCGTTTTCAAAATATTTGTAATAAACTGATTCCCAGATGAGTTACTAAT AATCAATTACCTTAGAAACTTTTTGAAAGCGAGGCAAGCGTTGTTCGTGA TGCATTTTATGAAAATGTCTGCTCCCCACGTATAATTCACTTCGCTTTTT TAATAAGTTTAGCCTGCCAGCTGAACACCAGCACCATTTTGACGTTGACT CGACATTATATCAAACTACTTTCTCCATAATGTTACAACTGTCTAGAACG AACGTCTTCCTAAAAACTTCAAACATCTACAACCAATGATCATTTTCAAC AGTACATTTTACGTTCGTTCACATGTTCACAATCACGTGAAAATAGGTTG GCTGATTACCGTATTACTTCGAATTAGTGCTCCCTTCTTTTGAAGGCCTC CCTCGAATAAACACCCCTCCTAAAATCCAAAAAATAAAAAAATAAACGCC CGGGGCGTTAATTCGAAGTAATACGGTATAAGGAATATCACGTGGTTCTA TGCTTAGATTTCCAGATATCATTGGGCTTTACTCCTTTTATTACAGTACT AGCACCAATCATCATGGAGAAACTTGAAACATACAACTGGATGAAAGTAT GATTCTTATCTTTATGTTTTGTTAAAAAAACTTTAAAAATAATCTTAAGA TATTGTATCTTATTTTGGGGCCTCGTATTCATAGAGAAGCTCAACCTACT GAACTCTCCATTAGTTTCTAAAGATTTAAGATTTAAGCATTCAATGATAT TTCCAGGGGTATTTCAAACTCTGTAAGATGGGACCTCGTCCTTCTCCTGA TGGGGATTGGGCGCTAAAAGCTCACCCCTACACTGGCACCATTTTCCCCT GAACTCTATTATTAGCAACTTTTATTTAGGCGACACCTAAATGATAGGAC ACCCCTGTGTCACAGAATCCGCTGGGACCCCAGCCCCACTGGAAAGATTG ACAAAAATTTCGTCCCCGGTGGGAAAATACCCTAAAATTTCACTTGGAAA CTGACTTTGATTTTATCCCCATTCAAAATTCAATGTTTAAAAATTGCACT CCAAACCCATCCCCACTAGATTTTTAACCTTGGAAAGATAGAATTTCTAT CCCCATTGGTTTTTCTATCTATAGATTATTGCTATCTCCACTGAGGAAAA AAGTTCCACCGGGGCTGTGAGACAGGGGTGTGATTTCTCTACAACTTGCG CCTAAGCTAGGGAACACGGTGTAGGCTATACGGTTGACTCGATCTTCAAG GAACCATGAATTTTCTTTGAATAAAAGAAAGATTTGAACAATTACGAGGA GTATTTCACACGACTCTCCAGCTGACGAAAAAATGCATCAGGTCTAATTA TAAAGGTTTAAATTAGTGAAACTCTGTAATATCAAAAACATTTTTTACTC ATCATCTTTTAGCGCATCAAACCATTACATGGACCCATCCAGATCTTATT ATGTGGTATCAGGTGTGAATTTGTCATTTCTTGAGATCATAATCATTCGA TTGTAAATGTACATTATGTTTTCTATTTCACCTTTCGGAACTAAACTACT ATGTGAAGTGGTGTGGAAACGACCAATCACTACAGTGGAATCTATATAAC TCGAACCCGCATGGGGAACTCAAATTTCTTCGAATTATGGAAATCTCTTG TTATTAAGTAAGGGTTAAAAGGCATTGTTTACTGGAGGGACCATAAAACT TGTTATAGAGTTATAGAGGTTTGAGTTTCACTATTTTACTATTAGAAGGT CTGAAGTTTCTCCCTGAAATATACAACGCTTGAAAAACGAAATTGAAAAA AAATTTCGGACTAATGCTTACTGTACCAATTTTTTTGACATGCTTTATAT TCCTCAATTTTTAGTTTGACTTTGATGGTACCTGTAGCTTGCTCCATCTT CCCTCAAAGGAGGTATGTATCATAAATCACCGGATCTGAATTTTTCAAGA TTAATATACGTAGACATCTCCAGGCTTTTGGTGCGCATAGTGATATAAAC TGAAAAATTCAATATTCGAATCAAGAGCATTGCGCATATATCCCGAAGAG TAACAGTAGTTTTACACTCGAAACGAAGGAAGATATGACATAGCCTAAGA CAAGACTTTGTTCTTTTGTTCTTTTATATTGTTTGATAAAATCTTTTAGG AACAAGTCATTTTCCATCACCAAATTCAATCTTTTCCTTTTCATTTCAGC TCACTCTCCATTGGTTCATTAGAAAAAGAATTACAGGAGAACATTATGAC GAGAAGTGATGCCTCTAATATCCAACGAGTCTATTTCAATAAAGGCTTGT AAAAGCAAAATGCATTGCGAACTTTAATTGCTGGCAATACATTTTAGAAA CGAATGAACCGTGAAGCTTCCGGTAGTGTAAACTTTGAAGCATTTTTTGA GAGGTAGGGGATTTACTTTACCAAATGGAGGACCCACCCTTTTTATCGGG TTGAATATATCAAAAGATTTTGTACTGTACATTTTTTAAAACATAATTTT TTTTAGAATTTTTATGAAAAATGATTTTTAGAAATTTATAGATTTTTCTT TGGTTTAGCAATAGAATTAATGAAATAAAAGGGATATATTTTTTTACTCG TTGCAAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008788TCONS_00008788Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00008788-proteinTCONS_00008788-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000087supercontigsc0000087:492832..497889 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
SFXN2PREDICTED: sideroflexin-2 isoform X2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
65.35 60.85 21.07 13.81 73.19 55.55 48.71 54.16 56.65 46.84 39.45 37.69 41.7 39.42 75.93 83.08 69.3 60.9 24.46 22.45 41.23 40.01 70.86 65.24 39.74 42.83 60.21 57.21 63.81 57.08