TCONS_00008788-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008788-protein
Unique NameTCONS_00008788-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length323

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008788-protein ID=TCONS_00008788-protein|Name=TCONS_00008788-protein|organism=Clytia hemisphaerica|type=polypeptide|length=323bp
MKLENGRIDLDSPRWPQDTFSGRFQHFWSITDWRNGLHSEQTLDDSKKLL
ELYRSGLEPPGTTEEQIWQAKRLYESAFHPDTGEKMNVIGRMSFQVPGGM
LITGGMLQYYKTVPQVVLWQWINQSFNALVNFTNRNAKSDITNKQIMTAY
VSATSGAMAVALGLNSLVKAAPPLMARYVPFAAVAAANCINIPLMRQSEI
LNGIRVYSENGEELGSSQRAAYTSIVQVTASRITMAAPGMLLAPIIMEKL
ETYNWMKRIKPLHGPIQILLCGISLTLMVPVACSIFPQRSSLSIGSLEKE
LQENIMTRSDASNIQRVYFNKGL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004924XLOC_004924Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008788TCONS_00008788Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004686Mtc
Vocabulary: Biological Process
TermDefinition
GO:0006811ion transport
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0015075ion transmembrane transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006811 ion transport
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016020 membrane
molecular_function GO:0015075 ion transmembrane transporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004686Tricarboxylate/iron carrierTIGRFAMTIGR00798TIGR00798coord: 8..323
e-value: 4.6E-124
score: 411.4
IPR004686Tricarboxylate/iron carrierPFAMPF03820Mtccoord: 15..323
e-value: 6.0E-132
score: 439.3

Blast
[Close]
BLAST of TCONS_00008788-protein vs. Swiss-Prot (Human)
Match: SFXN2 (Sideroflexin-2 OS=Homo sapiens GN=SFXN2 PE=1 SV=2)

HSP 1 Score: 357.451 bits (916), Expect = 9.951e-124
Identity = 179/316 (56.65%), Postives = 235/316 (74.37%), Query Frame = 0 
Query:    8 IDLDSPRWPQDTFSGRFQHFWSITDWRNGLHSEQTLDDSKKLLELYRSGLEPPGTTEEQIWQAKRLYESAFHPDTGEKMNVIGRMSFQVPGGMLITGGMLQYYKTVPQVVLWQWINQSFNALVNFTNRNAKSDITNKQIMTAYVSATSGAMAVALGLNSLVKAAPPLMARYVPFAAVAAANCINIPLMRQSEILNGIRVYSENGEELGSSQRAAYTSIVQVTASRITMAAPGMLLAPIIMEKLETYNWMKRIKPLHGPIQILLCGISLTLMVPVACSIFPQRSSLSIGSLEKELQENIMTRSDASNIQRVYFNKGL 323
             ++D+PRW Q TF GR +HF +ITD R    SE+ LD +K ++E  R G+ PPGT  EQ+  AK+LY+SAFHPDTGEKMNVIGRMSFQ+PGGM+ITG MLQ+Y+T+P V+ WQW+NQSFNALVN+TNRNA S  + +Q+  +Y +AT+ A+A A+G+N L K APPL+ R+VPFAAVAAANC+NIP+MRQ E++ GI V   N  E+G S+RAA   I QV  SRITM+APGM+L P+IME+LE  ++M+++K LH P+Q++L G  L  MVPVAC +FPQ+  L +  LE +LQ+ I  +        VYFNKGL
Sbjct:    8 FNIDAPRWDQRTFLGRVKHFLNITDPRTVFVSERELDWAKVMVEKSRMGVVPPGTQVEQLLYAKKLYDSAFHPDTGEKMNVIGRMSFQLPGGMIITGFMLQFYRTMPAVIFWQWVNQSFNALVNYTNRNAASPTSVRQMALSYFTATTTAVATAVGMNMLTKKAPPLVGRWVPFAAVAAANCVNIPMMRQQELIKGICVKDRNENEIGHSRRAAAIGITQVVISRITMSAPGMILLPVIMERLEKLHFMQKVKVLHAPLQVMLSGCFLIFMVPVACGLFPQKCELPVSYLEPKLQDTIKAKYGELE-PYVYFNKGL 322
The following BLAST results are available for this feature:
BLAST of TCONS_00008788-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SFXN29.951e-12456.65Sideroflexin-2 OS=Homo sapiens GN=SFXN2 PE=1 SV=2[more]
back to top