XLOC_004571 (gene) - C. hemisphaerica

Overview
NameXLOC_004571
Unique NameXLOC_004571
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000082:186010..190354+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004571 ID=XLOC_004571|Name=XLOC_004571|organism=Clytia hemisphaerica|type=gene|length=4345bp|location=Sequence derived from alignment at sc0000082:186010..190354+ (Clytia hemisphaerica)
TAGCGGTGCGTGATGGTAACCCAGAATCCAAGTCCAAAATCTGAAACATC
TGAACGCTGAATCCCAGTCTGGAAATTTCCATTTAAATGGTGTACACTAC
GCCAAATATATTCAGTGTGAGTGGGagaactttctttgtttttacatCTG
AATATAGTTTAAAATTCAGCTTTGCATCATTTCCAGACTGGTCTGAGTCT
TGTGTACTGTGAGCTATTATGGGATGGATGGTTTCGCTACTTGTTTCACT
TCTTTTTGGCTTCGGGGAATAGATGCTTTGGTGAACGCGACAGTCTTTTA
ATTAGAGTAGTTAGTTATTAATTACTCCACATAcgttactttccctcagc
caataaaaacatgataaattatcttaTCTCTAGTCTAGGTAACTGGCTGC
TGTGTGCGCGCTGCCTGTGTGTGGTGGTggagtattatttgttttttttg
gagtAATATTTGGAGTTTATTATTTCTAATAAAGTTAATTAATGAAGATa
cattataatattttataGTATTTTATCATTACCCACCTAAAATTCACAAC
TAATATTACTTCTTAGCattcaaatttcaaccaaactCATGAATAATCTC
ATAACTTTAATCTCTTAGTCTTAAGTCTTACACTTTCCAAGCTTGGTCTT
GGACACACTTaggggtcagtcacaaatcaattttaagttagaagaacgtc
aattgacgtatatgggtgggtgggttaaaggttgttgacgtttttcagaa
acatcgatttttcattccatgccaaatattacttNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTCT
TTCTGTCGCTACAtactacggagataattaattacaggaattttgtgaac
aagtttagaaattatctccatttctttttttttaaatataaactatgcga
gccgtagtgaaaatcaagatggctgacgaaacagcaATTGGCAATGAAGG
cagtttttatcaattttcgggtgtttgacgtttttgggtgtgggtgggtg
ggtcagcttttaaaacgtcaattgacgttcttctaacctagaatcgattt
gtgactgacccctTATCACCCCCCTTTTCTTGTTAGCCCCTTGActttta
gaatgattttaatatttgttgatatttatgaataaaattattttattaaa
caATCAAATGGAAAAGAGTGTAACTAAGTTATATCTTTTCGGGGGCTTTG
TAAGGGGTACcaaaatttgcttaaaaaattggGAAGGGGTCAAACAAGAA
AATGGGGCTTGGAAATTTTGGTAAACTTAATGGTATTTTAAAGCAACAAT
ATGTACCATCATATGTTAATAAAAACGCTAGTTATATTGTTATATGGTGA
AGTTAATGGCCCCTGACTTATATATTTTGTATTCTTTGATCACTTTGACA
CATACAGCATATTTCCTTCGAAACAGACTTTTTGTAAATGAAGAGGGTAA
GACTTAATTACAGAAGGGGcttggcagttacatcaaaatgcctcNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Naataattggattgtaacatcgagttaagtctcttttgttaagtcaccag
ggggtaaataaaacagaccttgatacatttatcgtttgtttcaacttgac
gatttgtttaaaactcagcctcctaaatatttggggtaggtaaaaataag
tacaaagaaattcatacttttccaacccggcgaatctactaaaaaagaag
cgaacaataaaatataattaccctttccaaataaacctcttcggtggcga
gggtagtctactctgacgtaattgtaaaatttatgtgatgggagtttgac
atagtaatgtaatgttgtttggggaattatgNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNtactctgttctcacacttatgtct
ttttttttcgcgtccttttccgtgattacttttatttatatttttaaaga
caggtaagaaggcatattgatgtaactgcttgGGTATAaagggggatgaa
ataaacctaggggctTCATAAACCTCTGCAAACTATGGTTAAAAAAAACT
GGATAGaactgtttttaaatatttgcaaAGTATCGTAACATTTTTTTGAT
TAGTCACTTAGCTTTTAGAATGATGAATGGTCCCTGCAAGCCATAAGACC
AGCAGTGACTTGcttttgaatttgaatattCTGAAGCTTTTAATACAATT
TGGGTATCAGACTCGAGAAAAAACGCCGTTGTATTGCTATCTATTATAAT
ATGTTCAGACTCactattaaaaactgttttttgtttCTAGAATAATTGAA
AATGAGCAACGCTGAAAGAAACCCTGATAACTTTGCATTATCCGTTAAAG
AAGGACTTGAAGGTAATGATGTTTCCAGTTTGAAGGAATTGTATAAATCA
CTTTCTGAAGAAGAAAACATAGAACATGCTAAAACTGTTTGCACTTCCAT
GTATCACTATACGTTGGAATGCATCCTAGACAAGATCAAATCTAAAGAAG
CCAATACAATGACCAAGTATTATGCATGGCATTTCTTACAACTTGGAACA
AGCTCCTCAGATATAGTTGAAAAAGTGCAGAAGGACTTTCAGTTATTACC
AGCACTTATGAATCTACATACAGAAGATTTTGACGATAACTTATTAGATT
CTCTACATGCTATTTCGTTGACCTTTTTGGTAGTCATGCTTGGAGTTGCG
GATGACTTATATTATGATCATTTTGCTGAATGTGGCGCTTTATCTTTTGT
TCATAACATGTTAGCACAAACTTCATTATCATCAACAGACAGTCAAATAG
AGTCACTCATTTTATTATTGAATCTTGTACTGGAAGGCACGAGTGCTTGT
AAAAACCAGTTAATTAATTTGGACTTTGAGAAATTGTTAGCAAAGAAGAT
TAAAGAGCGGCAACAATGTAATGAGAATCTATTAAAAGTATCACAAGTGA
CTCATCAGAAATTACTATTACTTACAAGTGAACACCAAACATTTATTGAA
ACTTTTCGTCACGGATTTCAAGAGGTAgctaagaaacaaaaaatatatca
aGAAGTCAAGACTTGCTCTTTTGGTACCTGTGAAGTGACTTATAACTCTC
AATTCAAGAGGTGTTCCAGGTGTAAAACAACAACTTATTGCAGCAAAGAG
TGTCAAgtgaaacactggaaaaatggACATTCCAAAACCTGCGTCCCTGT
CACCTAAGTAATCGTTTCGTATAGGTCAACCAAATCCTTTGATTCAGGAA
TTGAAATCGATTTTGCGTCGTCATCTTCAGGGGTACTCTCATTCGCCAAA
AACACATTTCATTATTACAATATGAtagattttgtttattttattcagat
ttcaatttGTTGATCAATTTTGTAGTCTTGAGATGTGACAAAGATTTGAA
TAATGTAATAACTTCACACTCAAAGTTTACTATTTTATAATGACC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008103TCONS_00008103Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00008103-proteinTCONS_00008103-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000082supercontigsc0000082:186010..190354 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
20.95	16.52	6.39	4.63	22.12	15.41	12.8	12.02	7.18	7.22	10.93	7.05	4.38	5.61	7.17	8.59	5.29	6.86	4.44	3.75	7.27	7.04	30.03	24.41	10.22	12.9	5.63	9.24	13.87	17.42