XLOC_004356 (gene) - C. hemisphaerica

Overview
NameXLOC_004356
Unique NameXLOC_004356
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000079:44621..51481+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004356 ID=XLOC_004356|Name=XLOC_004356|organism=Clytia hemisphaerica|type=gene|length=6861bp|location=Sequence derived from alignment at sc0000079:44621..51481+ (Clytia hemisphaerica)
attccgccgaagaaaagaaaaaggctCTAATACTGAAAACGAAAGAACAA TTGGATAGAGGGGGCATCAGAGTCGGTGAACATTTTCAGATTGGTGAATG AATTGGAGAATAGATCTTTTGTTACTTAACATTGAGAACAAAACggtatt tttattgtttcgctaaaaaaaagagaagaacAGGCAGTATCCGTATGGTG GAAagtaaaagtttatttttgagATATCTTTTTTAAACATCTTTGGTTTG ATGCTGGTAATTAGTTTGTTTTTCAGTATCTCGTACTTTTACTCACATTC CGTgtaattttccattggattgATAGTTTTGCGTTTCATCTGGGTTGTAT CTGGATTGTTTTAGTATCGATCCTTACGAAAGCTAGATCACACTTAAAGA GAAAGGAACAGATTCTAGTTTCCAAGCTAGGATTTTTAGTCTGGGTTGTA TCTGGATTGCTTTGGAATCGATCATCAAAGCTATATCTTACCTAAAGAGA AAGAAGTTCTTCAAGACTACGTAAAAGACTCTATTAAAAAGTAATCAAAG AAAAGAATTAATATTTTCCCAAGAAAAAAAAGGTTTCGCGAATTACGGAT AGGACAATATAACTATTTCATGAAATAATTGGTGTTAATATCAAACAGAC AGACAGAGAGAAAATATCACCTAAAAGTAGATAAACGAGAAACGTTACAT GAGGGAAAGTAGGTGAAATTTTCACCACGTATAATTTTGAGGAAATCCTT GTTTTCTTAGTCGAGAGCTATACGAGAGAATACAGCAGATTGGTTTTTAT TGATCGTGGGCTACGTCTTTCTTCTTTTACTACAAGGATATAGATTTTCA AACATTTATTCCTTTGGCAGAAGAACAAAATAAACTTAATGTGATATCAA CACACAAAAACCTTTAATCTTGACTTAATCATCATTAAGATATATTCAGC AaacgaaaaaatataaaaaagggGTTTTTGCTTGGTGTACTTAAGAACTG AAATATAAGGATTACAGAAACTGAGATAAACCATGAAAACCGCATTAATG AGCTTGGGAAATAACACAACTATTGTAGGTCACGAGAGACTAGAACCGAC TCCAATAACCATGGAACGTAAATGCGAATGGGATACTACAAACATTAGCT TGATTTTCTGCTACTTTTTAATCCTGTTTATTGGCACATGTGGTAATATA CTTGTGTTGGCCATGTTTAACAGAAAATCGAAACAATCCGCATTGAATTT ACTCATCATGTATCTTGCAGCTTTCGATTTGTTTGCTTCAATATTTGTAC CATTTATTTTTGGATACTGGGTTTGGGTTTGTGATTTACAATGGCATTTC GGTTTATTTGGGTGTAAGACGCTCCCAGTCGCAACACGGATCTTCACATC TGTATCGATTGGCATTTTACTGATCATGGCCATAGAACGATGTCGTGTTA TCATCTCACCATTTAAACCCCCTATATCTAGAAAAACAATACATTTCACC GTTTTCGTTACTGTAATTCTTGCCGTCGTCTCAGAGACGCATTACATCAC GACGTTGCACATAAACAGGGACGGCGAATGTGCCGTGGTTGTACACGAGT ATTACATAATCGCATCCATTACTATAACTTTATTACGAACTGTCACCTTT ATGAGTATTTTCCTATCCACTACATTGCTAGTAACATGTAAACTTAGACG GAAATCGGGTATTGATAATACGGAGACAAAGGAACTTGCAAGTCACATGG AGGTCCGGACGCGACGCAAACGGAAGGCAATGAAGATGTTGGCCGTTATG ATGGTCGTGTTTGGTATCACGGTATTGCCAAGAGATTTATTTCAAATGTC CTTGGTCATTTCGTATTTGTTGCCAGAAAAATATTGGATCGACTACTCGT gagtattcattttcttttttcttaaaaaaaccttaaaagaATTTGTAATA CCGTTCGTGCTTTTACAGCGGAAAAAATGGCCTGGTATATATTGTATCCT AAAGTTTTGTTCCTTGAGTAAAAATGAAAGGCAGTTTATTtatgtttgaa aaattatgagAGCATCACCTTAGCCTTAAGCATGTTTTAACTATGTAGGA GTTTTTTACCTTTATCTGCTTAGTCAAGAACCCACGAGGAAACTAtccgg gggggtacttaggcgaATGGAGGTTACAGGTATATGGCGCCCTTAAGAGT GCCTTTTTAGACCTTCGAAGTCCCTCTACGGGTCTAAAAAATCACAATAT CCaatttcagccccccccccttaaaaactCCAACATTTAACCCTAATAAG TTTATAAGTTTTAGGAAAAAAGGTCccaaaatttgcaagatttcgGTTTT CTCCTCGATTTTAAGCCctaaaatttctgatttttaaaaaccgGGCGGCA CCCCTCGTTACTTTGAAAAGCTACaactctcccccccccccccttttgat gaaaaactttcatttccccccccccccgtttttttttttcaatttttgaa aaaaaaaatattaaaaaaaaaaataaaaaaaagtaggggggggggggggg ctgtagCTTTTCAAAGTAACGAGGGGTGCCGCccggtttttaaaaaaaaa aaccccccccccccccgggtttttttttttttttaaaaaccggGCGGCAC CCctcgtcacaccgtaaaagtacaacccccccccccccccgtttttttat ttcaattttgaattaaaCTATCTGGTATTCAAAGGACATCTTGATACATA ATTCTGGTCTTACATTAATTTTCTTCGAGAGCTTAATGAAATTCAACCTT CATCAAAATTCCGTGTTATATTGAAATTTCCAAATCAAAAATGGGTGCGA TTAGATTGGAATAGGAGAAAAGCCATACAACAGTTCTGAGACATTACAAT CCCTTTAATCCTTTGGTCTATCAATATTCAaacaatattgaaaaaaaatg tttttgaaaatagagTATAATGAAAATCCTATGGTTGACACGAATTAATA TCCAAACCCCTCTCTGTAATTTATAAGATcagatttttgtaagaaaactg TTACAGTTTATGAGACACTCTTTTCGCACAGACCACAGTGGGACACCTTC CCACTGGGAAacttggccaaaatatcgtccccagtggaaagttAGAGGGA TAGTCATGGTTTCATCCCCCCCATCAAacttgaagcgatttagaattTTG GTAAGTTTATGATTGGCAGGCTAAACATTTTTGTCTCCggtaaacaataa aactagCGGCAAATAACCATACTTTTTTGGTGCTTCCGTTTAAAACGTTA CGTCATCAATATCAAGTATCACTGTTTTATtggtcttttttctttcttaa ggCTTGCCATACTACGCATCAATACTATCCTGAAGATCCTTCAGACGTCA AACTCCATATACAACGTCTTCATTTATGCTGGCATGTACAAAGGATTTGT CGCTAATGCTCTAAAGGTGAATATGGTTGTTGTACTTTTTGTGGTGATCT ACCTAAATGAAGTCATCCCTCTCGTTCcttatactttaatcggatCGAAC TTTGTGAGATGTAATCAACAAGATCAAATGAGTTTGAGTCTATCAAAGAG TGATGCTCATatcttttaaccctttaagtgtcacggtgattttttcaaag tttttcatagaaaatcgctagttcgaactttaaaggcttatatctccgga tctagctgccaaaaatgaatggaaacaaccattttgagtcaaaaattgca aattttcagCGTGACTTATGGAAAATCTGATTTAAAAAATCTCGCGTTGA TTCAATTTCGCAAGTCAGCTATCTCACGCGATAAAGACGGAGATCAAATC AAATTTCTCCGTCTTTATCGCGTGAGATAGCTGACTTGCGAAATTGAATC AACGCGAGATTTTTTAAATCAGATTTTCCATAAGTCACGctgaaaatttg caatttttgactcaaaatggttgtttccattcatttttggcagctagatc cggagatataagcctttaaagttcgaactagcgattttctatgaaaaact ttgaaaaaatcaccgtgacacttaaagggttaaaagatATGAGCATCACT CTTTGATAGACTCAAACTCAACCTCCTTTCAATAATTCACTTTTGTGTGC AAAAGTTGATCAAAGACAAGCTAATTGCCAGTTCATATTAAGgttgcgtg gatttaatttgtcgcaaaaaaaataatgatatatCTTGATTTCCAGACAT ATGCCTGGTTTTACGTTGTTTCAACAAGTATTTGCAGCGAAGTTTTTTTC AGTTGACACCCGCTTAGGCTTTGGTTTTTCTATTAATCTTCTACTATCTT ATATTTTGTAGATCTGCAAACGTGTGAAGAAGATAAAGAAACAATACACC ATAAGACGTCGAACCATCCAGCGGTCATACTACGAACGTGAAGAGGAATA TCATTTATCACTCAGCAAATCATCAAATTTGACCAGGTTTTCGCCAGACT GTGTGTCCACGGATGATGTCTGGATTTGATCTTGTTGGATTTGATCTTGT TGATCAAAAGGTGATATTTTGTGAAAGTGATAGCTCATTGCATTATCTTT TATACCGCTGTACCTTTCATAGACTAAATTCCGTTTATTTGAGATTTCAG TCctaatagtagagggcattttgtaaagtcgctcgactgttttgttagaa gcacttgttatacatttttggaaagctaaggggtaggggaatcgaaatta ctatgtttccaattttttttcggacactttgNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNatttcgattcccctaccccttagctttccaaaaatgtataacaag tgcttctaacaaaacagtcaagcgattccaaaaaatcgaacaaaattccc cctactataaaaacaattcaaaaaaatattttttgaggtcTCTGGTTTTA GACAATTTGTTTGGGCTCACTAAGGACGGTTGCAGCCTTGGTAACATGCC GGAAGCTTTCTTGGCGCCGAAATTCCATTCttttaccgtgaaaagcacag ctcaaaatcatatatttacgctgtgccgacgaatcgagattctattcatc gcgcaatcagcgaagacaaaagtaaccatgacgacNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatggt aatatttgctcttcatctttgattttttctacagtgattagattgacata tgcgcgataaaatttctattatttgtcttcagaggttactattttctttg aaaacttaacctctgatactcagggtaccatTCTTTACTTTCGATACCAC GCAGAAACCtcattttagtaaaaaaatgtttagaaagTTGATGGTTATAT CCACTTAATATGTTGTTTTTCTCAACTGAATTGCGCCCTTCATCTTgaga aacgtttttttataagaacaaactacaaaAGAAATAACATAGGGCTACGG tgatcaaaaagttaagaacatgttgagaaaATTATAAGGCTTTACGGGCa caaaaatttttagatgttctccTAGAAAAAATATGTACCGCCAAAAATAT GGTAAAAATATATGCCAAAGCACGAAAAACACAGAAGAAAATGGCGTTAT AGTAAATACATACTCTTATTCTTCTATTTTAGGAAGTTTACGCAGACACA TCGTGAATTGTGGGAATGGACCAATAAACGAGATATCAATTTTCTTCGGA TTTTATGCTATGTAAAATATTGTAATGTaatctaaaaaattatttttaat taacTTTAATTTATTCATATTGTTAAAAAAGCTGTAAAATATAATACATA CCATAACAAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007683TCONS_00007683Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00007683-proteinTCONS_00007683-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000079supercontigsc0000079:44621..51481 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.7 0.76 0.57 0.4 1.29 0.81 6.69 7.98 4.96 4.53 2.55 3.97 0.67 0.37 0.52 0.95 1.42 1.29 0.67 1.16 2.3 2.07 0.93 1.56 1 1.15 0.74 0.81 0.32 0.26