TCONS_00007683 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007683
Unique NameTCONS_00007683
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2391

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007683 ID=TCONS_00007683|Name=TCONS_00007683|organism=Clytia hemisphaerica|type=transcript|length=2391bp
attccgccgaagaaaagaaaaaggctCTAATACTGAAAACGAAAGAACAA
TTGGATAGAGGGGGCATCAGAGTCGGTGAACATTTTCAGATTGGTGAATG
AATTGGAGAATAGATCTTTTGTTACTTAACATTGAGAACAAAACggtatt
tttattgtttcgctaaaaaaaagagaagaacAGGCAGTATCCGTATGGTG
GAAagtaaaagtttatttttgagATATCTTTTTTAAACATCTTTGGTTTG
ATGCTGGTAATTAGTTTGTTTTTCAGTATCTCGTACTTTTACTCACATTC
CGTgtaattttccattggattgATAGTTTTGCGTTTCATCTGGGTTGTAT
CTGGATTGTTTTAGTATCGATCCTTACGAAAGCTAGATCACACTTAAAGA
GAAAGGAACAGATTCTAGTTTCCAAGCTAGGATTTTTAGTCTGGGTTGTA
TCTGGATTGCTTTGGAATCGATCATCAAAGCTATATCTTACCTAAAGAGA
AAGAAGTTCTTCAAGACTACGTAAAAGACTCTATTAAAAAGTAATCAAAG
AAAAGAATTAATATTTTCCCAAGAAAAAAAAGGTTTCGCGAATTACGGAT
AGGACAATATAACTATTTCATGAAATAATTGGTGTTAATATCAAACAGAC
AGACAGAGAGAAAATATCACCTAAAAGTAGATAAACGAGAAACGTTACAT
GAGGGAAAGTAGGTGAAATTTTCACCACGTATAATTTTGAGGAAATCCTT
GTTTTCTTAGTCGAGAGCTATACGAGAGAATACAGCAGATTGGTTTTTAT
TGATCGTGGGCTACGTCTTTCTTCTTTTACTACAAGGATATAGATTTTCA
AACATTTATTCCTTTGGCAGAAGAACAAAATAAACTTAATGTGATATCAA
CACACAAAAACCTTTAATCTTGACTTAATCATCATTAAGATATATTCAGC
AaacgaaaaaatataaaaaagggGTTTTTGCTTGGTGTACTTAAGAACTG
AAATATAAGGATTACAGAAACTGAGATAAACCATGAAAACCGCATTAATG
AGCTTGGGAAATAACACAACTATTGTAGGTCACGAGAGACTAGAACCGAC
TCCAATAACCATGGAACGTAAATGCGAATGGGATACTACAAACATTAGCT
TGATTTTCTGCTACTTTTTAATCCTGTTTATTGGCACATGTGGTAATATA
CTTGTGTTGGCCATGTTTAACAGAAAATCGAAACAATCCGCATTGAATTT
ACTCATCATGTATCTTGCAGCTTTCGATTTGTTTGCTTCAATATTTGTAC
CATTTATTTTTGGATACTGGGTTTGGGTTTGTGATTTACAATGGCATTTC
GGTTTATTTGGGTGTAAGACGCTCCCAGTCGCAACACGGATCTTCACATC
TGTATCGATTGGCATTTTACTGATCATGGCCATAGAACGATGTCGTGTTA
TCATCTCACCATTTAAACCCCCTATATCTAGAAAAACAATACATTTCACC
GTTTTCGTTACTGTAATTCTTGCCGTCGTCTCAGAGACGCATTACATCAC
GACGTTGCACATAAACAGGGACGGCGAATGTGCCGTGGTTGTACACGAGT
ATTACATAATCGCATCCATTACTATAACTTTATTACGAACTGTCACCTTT
ATGAGTATTTTCCTATCCACTACATTGCTAGTAACATGTAAACTTAGACG
GAAATCGGGTATTGATAATACGGAGACAAAGGAACTTGCAAGTCACATGG
AGGTCCGGACGCGACGCAAACGGAAGGCAATGAAGATGTTGGCCGTTATG
ATGGTCGTGTTTGGTATCACGGTATTGCCAAGAGATTTATTTCAAATGTC
CTTGGTCATTTCGTATTTGTTGCCAGAAAAATATTGGATCGACTACTCgC
TTGCCATACTACGCATCAATACTATCCTGAAGATCCTTCAGACGTCAAAC
TCCATATACAACGTCTTCATTTATGCTGGCATGTACAAAGGATTTGTCGC
TAATGCTCTAAAGATCTGCAAACGTGTGAAGAAGATAAAGAAACAATACA
CCATAAGACGTCGAACCATCCAGCGGTCATACTACGAACGTGAAGAGGAA
TATCATTTATCACTCAGCAAATCATCAAATTTGACCAGGTTTTCGCCAGA
CTGTGTGTCCACGGATGATGTCTGGATTTGATCTTGTTGGATTTGATCTT
GTTGATCAAAAGGAAGTTTACGCAGACACATCGTGAATTGTGGGAATGGA
CCAATAAACGAGATATCAATTTTCTTCGGATTTTATGCTATGTAAAATAT
TGTAATGTaatctaaaaaattatttttaattaacTTTAATTTATTCATAT
TGTTAAAAAAGCTGTAAAATATAATACATACCATAACAAAG
Run BLAST on NCBI

protein sequence of TCONS_00007683-protein

>TCONS_00007683-protein ID=TCONS_00007683-protein|Name=TCONS_00007683-protein|organism=Clytia hemisphaerica|type=polypeptide|length=382bp
MKTALMSLGNNTTIVGHERLEPTPITMERKCEWDTTNISLIFCYFLILFI
GTCGNILVLAMFNRKSKQSALNLLIMYLAAFDLFASIFVPFIFGYWVWVC
DLQWHFGLFGCKTLPVATRIFTSVSIGILLIMAIERCRVIISPFKPPISR
KTIHFTVFVTVILAVVSETHYITTLHINRDGECAVVVHEYYIIASITITL
LRTVTFMSIFLSTTLLVTCKLRRKSGIDNTETKELASHMEVRTRRKRKAM
KMLAVMMVVFGITVLPRDLFQMSLVISYLLPEKYWIDYSLAILRINTILK
ILQTSNSIYNVFIYAGMYKGFVANALKICKRVKKIKKQYTIRRRTIQRSY
YEREEEYHLSLSKSSNLTRFSPDCVSTDDVWI
Run BLAST on NCBI

transcript from alignment at sc0000079:44621..51481+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007683 ID=TCONS_00007683|Name=TCONS_00007683|organism=Clytia hemisphaerica|type=transcript|length=6861bp|location=Sequence derived from alignment at sc0000079:44621..51481+ (Clytia hemisphaerica)
attccgccgaagaaaagaaaaaggctCTAATACTGAAAACGAAAGAACAA TTGGATAGAGGGGGCATCAGAGTCGGTGAACATTTTCAGATTGGTGAATG AATTGGAGAATAGATCTTTTGTTACTTAACATTGAGAACAAAACggtatt tttattgtttcgctaaaaaaaagagaagaacAGGCAGTATCCGTATGGTG GAAagtaaaagtttatttttgagATATCTTTTTTAAACATCTTTGGTTTG ATGCTGGTAATTAGTTTGTTTTTCAGTATCTCGTACTTTTACTCACATTC CGTgtaattttccattggattgATAGTTTTGCGTTTCATCTGGGTTGTAT CTGGATTGTTTTAGTATCGATCCTTACGAAAGCTAGATCACACTTAAAGA GAAAGGAACAGATTCTAGTTTCCAAGCTAGGATTTTTAGTCTGGGTTGTA TCTGGATTGCTTTGGAATCGATCATCAAAGCTATATCTTACCTAAAGAGA AAGAAGTTCTTCAAGACTACGTAAAAGACTCTATTAAAAAGTAATCAAAG AAAAGAATTAATATTTTCCCAAGAAAAAAAAGGTTTCGCGAATTACGGAT AGGACAATATAACTATTTCATGAAATAATTGGTGTTAATATCAAACAGAC AGACAGAGAGAAAATATCACCTAAAAGTAGATAAACGAGAAACGTTACAT GAGGGAAAGTAGGTGAAATTTTCACCACGTATAATTTTGAGGAAATCCTT GTTTTCTTAGTCGAGAGCTATACGAGAGAATACAGCAGATTGGTTTTTAT TGATCGTGGGCTACGTCTTTCTTCTTTTACTACAAGGATATAGATTTTCA AACATTTATTCCTTTGGCAGAAGAACAAAATAAACTTAATGTGATATCAA CACACAAAAACCTTTAATCTTGACTTAATCATCATTAAGATATATTCAGC AaacgaaaaaatataaaaaagggGTTTTTGCTTGGTGTACTTAAGAACTG AAATATAAGGATTACAGAAACTGAGATAAACCATGAAAACCGCATTAATG AGCTTGGGAAATAACACAACTATTGTAGGTCACGAGAGACTAGAACCGAC TCCAATAACCATGGAACGTAAATGCGAATGGGATACTACAAACATTAGCT TGATTTTCTGCTACTTTTTAATCCTGTTTATTGGCACATGTGGTAATATA CTTGTGTTGGCCATGTTTAACAGAAAATCGAAACAATCCGCATTGAATTT ACTCATCATGTATCTTGCAGCTTTCGATTTGTTTGCTTCAATATTTGTAC CATTTATTTTTGGATACTGGGTTTGGGTTTGTGATTTACAATGGCATTTC GGTTTATTTGGGTGTAAGACGCTCCCAGTCGCAACACGGATCTTCACATC TGTATCGATTGGCATTTTACTGATCATGGCCATAGAACGATGTCGTGTTA TCATCTCACCATTTAAACCCCCTATATCTAGAAAAACAATACATTTCACC GTTTTCGTTACTGTAATTCTTGCCGTCGTCTCAGAGACGCATTACATCAC GACGTTGCACATAAACAGGGACGGCGAATGTGCCGTGGTTGTACACGAGT ATTACATAATCGCATCCATTACTATAACTTTATTACGAACTGTCACCTTT ATGAGTATTTTCCTATCCACTACATTGCTAGTAACATGTAAACTTAGACG GAAATCGGGTATTGATAATACGGAGACAAAGGAACTTGCAAGTCACATGG AGGTCCGGACGCGACGCAAACGGAAGGCAATGAAGATGTTGGCCGTTATG ATGGTCGTGTTTGGTATCACGGTATTGCCAAGAGATTTATTTCAAATGTC CTTGGTCATTTCGTATTTGTTGCCAGAAAAATATTGGATCGACTACTCGT gagtattcattttcttttttcttaaaaaaaccttaaaagaATTTGTAATA CCGTTCGTGCTTTTACAGCGGAAAAAATGGCCTGGTATATATTGTATCCT AAAGTTTTGTTCCTTGAGTAAAAATGAAAGGCAGTTTATTtatgtttgaa aaattatgagAGCATCACCTTAGCCTTAAGCATGTTTTAACTATGTAGGA GTTTTTTACCTTTATCTGCTTAGTCAAGAACCCACGAGGAAACTAtccgg gggggtacttaggcgaATGGAGGTTACAGGTATATGGCGCCCTTAAGAGT GCCTTTTTAGACCTTCGAAGTCCCTCTACGGGTCTAAAAAATCACAATAT CCaatttcagccccccccccttaaaaactCCAACATTTAACCCTAATAAG TTTATAAGTTTTAGGAAAAAAGGTCccaaaatttgcaagatttcgGTTTT CTCCTCGATTTTAAGCCctaaaatttctgatttttaaaaaccgGGCGGCA CCCCTCGTTACTTTGAAAAGCTACaactctcccccccccccccttttgat gaaaaactttcatttccccccccccccgtttttttttttcaatttttgaa aaaaaaaatattaaaaaaaaaaataaaaaaaagtaggggggggggggggg ctgtagCTTTTCAAAGTAACGAGGGGTGCCGCccggtttttaaaaaaaaa aaccccccccccccccgggtttttttttttttttaaaaaccggGCGGCAC CCctcgtcacaccgtaaaagtacaacccccccccccccccgtttttttat ttcaattttgaattaaaCTATCTGGTATTCAAAGGACATCTTGATACATA ATTCTGGTCTTACATTAATTTTCTTCGAGAGCTTAATGAAATTCAACCTT CATCAAAATTCCGTGTTATATTGAAATTTCCAAATCAAAAATGGGTGCGA TTAGATTGGAATAGGAGAAAAGCCATACAACAGTTCTGAGACATTACAAT CCCTTTAATCCTTTGGTCTATCAATATTCAaacaatattgaaaaaaaatg tttttgaaaatagagTATAATGAAAATCCTATGGTTGACACGAATTAATA TCCAAACCCCTCTCTGTAATTTATAAGATcagatttttgtaagaaaactg TTACAGTTTATGAGACACTCTTTTCGCACAGACCACAGTGGGACACCTTC CCACTGGGAAacttggccaaaatatcgtccccagtggaaagttAGAGGGA TAGTCATGGTTTCATCCCCCCCATCAAacttgaagcgatttagaattTTG GTAAGTTTATGATTGGCAGGCTAAACATTTTTGTCTCCggtaaacaataa aactagCGGCAAATAACCATACTTTTTTGGTGCTTCCGTTTAAAACGTTA CGTCATCAATATCAAGTATCACTGTTTTATtggtcttttttctttcttaa ggCTTGCCATACTACGCATCAATACTATCCTGAAGATCCTTCAGACGTCA AACTCCATATACAACGTCTTCATTTATGCTGGCATGTACAAAGGATTTGT CGCTAATGCTCTAAAGGTGAATATGGTTGTTGTACTTTTTGTGGTGATCT ACCTAAATGAAGTCATCCCTCTCGTTCcttatactttaatcggatCGAAC TTTGTGAGATGTAATCAACAAGATCAAATGAGTTTGAGTCTATCAAAGAG TGATGCTCATatcttttaaccctttaagtgtcacggtgattttttcaaag tttttcatagaaaatcgctagttcgaactttaaaggcttatatctccgga tctagctgccaaaaatgaatggaaacaaccattttgagtcaaaaattgca aattttcagCGTGACTTATGGAAAATCTGATTTAAAAAATCTCGCGTTGA TTCAATTTCGCAAGTCAGCTATCTCACGCGATAAAGACGGAGATCAAATC AAATTTCTCCGTCTTTATCGCGTGAGATAGCTGACTTGCGAAATTGAATC AACGCGAGATTTTTTAAATCAGATTTTCCATAAGTCACGctgaaaatttg caatttttgactcaaaatggttgtttccattcatttttggcagctagatc cggagatataagcctttaaagttcgaactagcgattttctatgaaaaact ttgaaaaaatcaccgtgacacttaaagggttaaaagatATGAGCATCACT CTTTGATAGACTCAAACTCAACCTCCTTTCAATAATTCACTTTTGTGTGC AAAAGTTGATCAAAGACAAGCTAATTGCCAGTTCATATTAAGgttgcgtg gatttaatttgtcgcaaaaaaaataatgatatatCTTGATTTCCAGACAT ATGCCTGGTTTTACGTTGTTTCAACAAGTATTTGCAGCGAAGTTTTTTTC AGTTGACACCCGCTTAGGCTTTGGTTTTTCTATTAATCTTCTACTATCTT ATATTTTGTAGATCTGCAAACGTGTGAAGAAGATAAAGAAACAATACACC ATAAGACGTCGAACCATCCAGCGGTCATACTACGAACGTGAAGAGGAATA TCATTTATCACTCAGCAAATCATCAAATTTGACCAGGTTTTCGCCAGACT GTGTGTCCACGGATGATGTCTGGATTTGATCTTGTTGGATTTGATCTTGT TGATCAAAAGGTGATATTTTGTGAAAGTGATAGCTCATTGCATTATCTTT TATACCGCTGTACCTTTCATAGACTAAATTCCGTTTATTTGAGATTTCAG TCctaatagtagagggcattttgtaaagtcgctcgactgttttgttagaa gcacttgttatacatttttggaaagctaaggggtaggggaatcgaaatta ctatgtttccaattttttttcggacactttgNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNatttcgattcccctaccccttagctttccaaaaatgtataacaag tgcttctaacaaaacagtcaagcgattccaaaaaatcgaacaaaattccc cctactataaaaacaattcaaaaaaatattttttgaggtcTCTGGTTTTA GACAATTTGTTTGGGCTCACTAAGGACGGTTGCAGCCTTGGTAACATGCC GGAAGCTTTCTTGGCGCCGAAATTCCATTCttttaccgtgaaaagcacag ctcaaaatcatatatttacgctgtgccgacgaatcgagattctattcatc gcgcaatcagcgaagacaaaagtaaccatgacgacNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatggt aatatttgctcttcatctttgattttttctacagtgattagattgacata tgcgcgataaaatttctattatttgtcttcagaggttactattttctttg aaaacttaacctctgatactcagggtaccatTCTTTACTTTCGATACCAC GCAGAAACCtcattttagtaaaaaaatgtttagaaagTTGATGGTTATAT CCACTTAATATGTTGTTTTTCTCAACTGAATTGCGCCCTTCATCTTgaga aacgtttttttataagaacaaactacaaaAGAAATAACATAGGGCTACGG tgatcaaaaagttaagaacatgttgagaaaATTATAAGGCTTTACGGGCa caaaaatttttagatgttctccTAGAAAAAATATGTACCGCCAAAAATAT GGTAAAAATATATGCCAAAGCACGAAAAACACAGAAGAAAATGGCGTTAT AGTAAATACATACTCTTATTCTTCTATTTTAGGAAGTTTACGCAGACACA TCGTGAATTGTGGGAATGGACCAATAAACGAGATATCAATTTTCTTCGGA TTTTATGCTATGTAAAATATTGTAATGTaatctaaaaaattatttttaat taacTTTAATTTATTCATATTGTTAAAAAAGCTGTAAAATATAATACATA CCATAACAAAG

Coding sequence (CDS) from alignment at sc0000079:44621..51481+

>TCONS_00007683 ID=TCONS_00007683|Name=TCONS_00007683|organism=Clytia hemisphaerica|type=CDS|length=3447bp|location=Sequence derived from alignment at sc0000079:44621..51481+ (Clytia hemisphaerica)
ATGAAAACCGCATTAATGAGCTTGGGAAATAACACAACTATTGTAGGTCA
CGAGAGACTAGAACCGACTCCAATAACCATGGAACGTAAATGCGAATGGG
ATACTACAAACATTAGCTTGATTTTCTGCTACTTTTTAATCCTGTTTATT
GGCACATGTGGTAATATACTTGTGTTGGCCATGTTTAACAGAAAATCGAA
ACAATCCGCATTGAATTTACTCATCATGTATCTTGCAGCTTTCGATTTGT
TTGCTTCAATATTTGTACCATTTATTTTTGGATACTGGGTTTGGGTTTGT
GATTTACAATGGCATTTCGGTTTATTTGGGTGTAAGACGCTCCCAGTCGC
AACACGGATCTTCACATCTGTATCGATTGGCATTTTACTGATCATGGCCA
TAGAACGATGTCGTGTTATCATCTCACCATTTAAACCCCCTATATCTAGA
AAAACAATACATTTCACCGTTTTCGTTACTGTAATTCTTGCCGTCGTCTC
AGAGACGCATTACATCACGACGTTGCACATAAACAGGGACGGCGAATGTG
CCGTGGTTGTACACGAGTATTACATAATCGCATCCATTACTATAACTTTA
TTACGAACTGTCACCTTTATGAGTATTTTCCTATCCACTACATTGCTAGT
AACATGTAAACTTAGACGGAAATCGGGTATTGATAATACGGAGACAAAGG
AACTTGCAAGTCACATGGAGGTCCGGACGCGACGCAAACGGAAGGCAATG
AAGATGTTGGCCGTTATGATGGTCGTGTTTGGTATCACGGTATTGCCAAG
AGATTTATTTCAAATGTCCTTGGTCATTTCGTATTTGTTGCCAGAAAAAT
ATTGGATCGACTACTCgCTTGCCATACTACGCATCAATACTATCCTGAAG
ATCCTTCAGACGTCAAACTCCATATACAACGTCTTCATTTATGCTGGCAT
GTACAAAGGATTTGTCGCTAATGCTCTAAAGATCTGCAAACGTGTGAAGA
AGATAAAGAAACAATACACCATAAGACGTCGAACCATCCAGCGGTCATAC
TACGAACGTGAAGAGGAATATCATTTATCACTCAGCAAATCATCAAATTT
GACCAGGTTTTCGCCAGACTGTGTGTCCACGGATGATGTCTGGATTTGAA
TGAAAACCGCATTAATGAGCTTGGGAAATAACACAACTATTGTAGGTCAC
GAGAGACTAGAACCGACTCCAATAACCATGGAACGTAAATGCGAATGGGA
TACTACAAACATTAGCTTGATTTTCTGCTACTTTTTAATCCTGTTTATTG
GCACATGTGGTAATATACTTGTGTTGGCCATGTTTAACAGAAAATCGAAA
CAATCCGCATTGAATTTACTCATCATGTATCTTGCAGCTTTCGATTTGTT
TGCTTCAATATTTGTACCATTTATTTTTGGATACTGGGTTTGGGTTTGTG
ATTTACAATGGCATTTCGGTTTATTTGGGTGTAAGACGCTCCCAGTCGCA
ACACGGATCTTCACATCTGTATCGATTGGCATTTTACTGATCATGGCCAT
AGAACGATGTCGTGTTATCATCTCACCATTTAAACCCCCTATATCTAGAA
AAACAATACATTTCACCGTTTTCGTTACTGTAATTCTTGCCGTCGTCTCA
GAGACGCATTACATCACGACGTTGCACATAAACAGGGACGGCGAATGTGC
CGTGGTTGTACACGAGTATTACATAATCGCATCCATTACTATAACTTTAT
TACGAACTGTCACCTTTATGAGTATTTTCCTATCCACTACATTGCTAGTA
ACATGTAAACTTAGACGGAAATCGGGTATTGATAATACGGAGACAAAGGA
ACTTGCAAGTCACATGGAGGTCCGGACGCGACGCAAACGGAAGGCAATGA
AGATGTTGGCCGTTATGATGGTCGTGTTTGGTATCACGGTATTGCCAAGA
GATTTATTTCAAATGTCCTTGGTCATTTCGTATTTGTTGCCAGAAAAATA
TTGGATCGACTACTCgCTTGCCATACTACGCATCAATACTATCCTGAAGA
TCCTTCAGACGTCAAACTCCATATACAACGTCTTCATTTATGCTGGCATG
TACAAAGGATTTGTCGCTAATGCTCTAAAGATCTGCAAACGTGTGAAGAA
GATAAAGAAACAATACACCATAAGACGTCGAACCATCCAGCGGTCATACT
ACGAACGTGAAGAGGAATATCATTTATCACTCAGCAAATCATCAAATTTG
ACCAGGTTTTCGCCAGACTGTGTGTCCACGGATGATGTCTGGATTTGAAT
GAAAACCGCATTAATGAGCTTGGGAAATAACACAACTATTGTAGGTCACG
AGAGACTAGAACCGACTCCAATAACCATGGAACGTAAATGCGAATGGGAT
ACTACAAACATTAGCTTGATTTTCTGCTACTTTTTAATCCTGTTTATTGG
CACATGTGGTAATATACTTGTGTTGGCCATGTTTAACAGAAAATCGAAAC
AATCCGCATTGAATTTACTCATCATGTATCTTGCAGCTTTCGATTTGTTT
GCTTCAATATTTGTACCATTTATTTTTGGATACTGGGTTTGGGTTTGTGA
TTTACAATGGCATTTCGGTTTATTTGGGTGTAAGACGCTCCCAGTCGCAA
CACGGATCTTCACATCTGTATCGATTGGCATTTTACTGATCATGGCCATA
GAACGATGTCGTGTTATCATCTCACCATTTAAACCCCCTATATCTAGAAA
AACAATACATTTCACCGTTTTCGTTACTGTAATTCTTGCCGTCGTCTCAG
AGACGCATTACATCACGACGTTGCACATAAACAGGGACGGCGAATGTGCC
GTGGTTGTACACGAGTATTACATAATCGCATCCATTACTATAACTTTATT
ACGAACTGTCACCTTTATGAGTATTTTCCTATCCACTACATTGCTAGTAA
CATGTAAACTTAGACGGAAATCGGGTATTGATAATACGGAGACAAAGGAA
CTTGCAAGTCACATGGAGGTCCGGACGCGACGCAAACGGAAGGCAATGAA
GATGTTGGCCGTTATGATGGTCGTGTTTGGTATCACGGTATTGCCAAGAG
ATTTATTTCAAATGTCCTTGGTCATTTCGTATTTGTTGCCAGAAAAATAT
TGGATCGACTACTCgCTTGCCATACTACGCATCAATACTATCCTGAAGAT
CCTTCAGACGTCAAACTCCATATACAACGTCTTCATTTATGCTGGCATGT
ACAAAGGATTTGTCGCTAATGCTCTAAAGATCTGCAAACGTGTGAAGAAG
ATAAAGAAACAATACACCATAAGACGTCGAACCATCCAGCGGTCATACTA
CGAACGTGAAGAGGAATATCATTTATCACTCAGCAAATCATCAAATTTGA
CCAGGTTTTCGCCAGACTGTGTGTCCACGGATGATGTCTGGATTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004356XLOC_004356Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007683-proteinTCONS_00007683-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007683-exon-sc0000079-1491911889:44621..46518TCONS_00007683-exon-sc0000079-1491911889:44621..46518Clytia hemisphaericaexon
TCONS_00007683-exon-sc0000079-1510915933:44621..46518TCONS_00007683-exon-sc0000079-1510915933:44621..46518Clytia hemisphaericaexon
TCONS_00007683-exon-sc0000079-1575043694:44621..46518TCONS_00007683-exon-sc0000079-1575043694:44621..46518Clytia hemisphaericaexon
TCONS_00007683-exon-sc0000079-1491911889:47972..48086TCONS_00007683-exon-sc0000079-1491911889:47972..48086Clytia hemisphaericaexon
TCONS_00007683-exon-sc0000079-1510915933:47972..48086TCONS_00007683-exon-sc0000079-1510915933:47972..48086Clytia hemisphaericaexon
TCONS_00007683-exon-sc0000079-1575043694:47972..48086TCONS_00007683-exon-sc0000079-1575043694:47972..48086Clytia hemisphaericaexon
TCONS_00007683-exon-sc0000079-1491911889:48982..49180TCONS_00007683-exon-sc0000079-1491911889:48982..49180Clytia hemisphaericaexon
TCONS_00007683-exon-sc0000079-1510915933:48982..49180TCONS_00007683-exon-sc0000079-1510915933:48982..49180Clytia hemisphaericaexon
TCONS_00007683-exon-sc0000079-1575043694:48982..49180TCONS_00007683-exon-sc0000079-1575043694:48982..49180Clytia hemisphaericaexon
TCONS_00007683-exon-sc0000079-1491911889:51303..51481TCONS_00007683-exon-sc0000079-1491911889:51303..51481Clytia hemisphaericaexon
TCONS_00007683-exon-sc0000079-1510915933:51303..51481TCONS_00007683-exon-sc0000079-1510915933:51303..51481Clytia hemisphaericaexon
TCONS_00007683-exon-sc0000079-1575043694:51303..51481TCONS_00007683-exon-sc0000079-1575043694:51303..51481Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000079supercontigsc0000079:44621..51481 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.699149 0.761057 0.570697 0.39624 1.29367 0.814353 6.68924 7.98454 4.9599 4.53136 2.55329 3.97409 0.670439 0.370589 0.517023 0.951163 1.41587 1.28858 0.674075 1.15753 2.29518 2.07032 0.932128 1.55929 0.995041 1.15291 0.735725 0.808979 0.324838 0.257412
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000276GPCR_Rhodpsn
IPR017452GPCR_Rhodpsn_7TM
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00007683 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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