XLOC_003936 (gene) - C. hemisphaerica

Overview
NameXLOC_003936
Unique NameXLOC_003936
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000073:384562..391326+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003936 ID=XLOC_003936|Name=XLOC_003936|organism=Clytia hemisphaerica|type=gene|length=6765bp|location=Sequence derived from alignment at sc0000073:384562..391326+ (Clytia hemisphaerica)
attaaAAGATATACAACAAAAGAAGAATGGACCCGATCAtagttttcact tttcttttcacAATATCACTGGTCACAAAGGTAAGAACAATTTCTTCATC TTCCCATTTCAAGGTCCATCCAAAATGAAGGAGAGGAGAACTACGGTAGA AtactctttaaaaatttgattcCTCTGTATCAACCAATACCTTTCTCCGT GTTACCCCTGTATCCTTTGATGCACCCCTGTCTCCCCATAACAGCCCTGT CTTCTTTTAAATTCTTAAATTGTACAGGTGCATATTCATGACACCACAAT ACTGTTTTTCTAGATTTGCATAACCCTTCACAGCTCTTTGAGGTCCTAAC TTGAACATACAGGGATAAGGCTACATTAccatttattttttatcaggtca aatcaaaaaattaatataGGAAATTTGGGAAGTGTCAGTATTGTCTAATT TCATTGTGATATTTACTCACTCTTCTGACTCTACAAATTTCTTGTTTGCC GATACCAAAGTCACGAGGATTATTTCGCGCCAAAAAGACATCATCGCTCT TACCCAGTCTCTTCAAACATCGATGGAGAGCTCAATGATGGAGTTTTAGT GACAACTACTTTAGCTTTTTCGTCAGTCATGACACTCTGTGACAGTGCTT TATCTTATTTGTTAATCATGGCACTCCACCGCAGTGTGTTTAAATGTGGC GATCTTTAATAGTAAACTAAATATCAACTGCGTTTTGAAGCTATGGTGTT TTTAGAAAATTCCTCCTATTTTTCTGTCATCGAATTAAATCAGCTATATT GCCACGCATCAGTCTTTTAAGTGGAAATTCGAATAAAATCACCAGCGTTT TCACGAGCAACCTTATGTCACAAACTGTAATGCTAGGAAAGGGACACCTT TTAGGAACCTTTGTTACTGGTCACTACTTTCTGTGCAAGCTTGTAAGATT TTCCTGCCTCTTTTAAGATGCCTTAACCCTTCATCCATCTTAGCAacatc aatattttgaaatgttatgAAAAAGAAGCGCCAAAAACTCCTTGCCCAGT TCAAATAAACAAGATCTCAAACTACAACATGCTTCGACATGAAATCCATT AAAAATGCGCGGGAAAAATATTTCCGCTGTCTGTCTGTCATAAAGTGATA TGTTGAAAAGACAAGACAAGATATTTTAATCAACTTCTCGTTTTACAAAA TATGATTCTAATCTGTATGCTTAAATAGAATGATTTTGACATCAGTATAT TGTACCCGCTTTCAAAGTCTTgtccaaaaaaaatatttctgaatCTTCCC AAAGGcttactttctttttgttattgcaGGTTAACTCGAGTCCAGCCAAA TNTATTTCTGAATCTTCCCCTATCAAATAAACTTTTTACCCACTTTCTTT TTGTCATTACAGGTTAACTCGAGTCCAGCCAAATTTTGTCACCCTGGGTA CGAAGTTGGCGAGGATAATAAATGTCGCGCATGTCAGGTAGAATAGCCTC CGTACAATTTTGTTGTGCTTGAAGCACACACTACATAATATAAAATACAT TCGAACTTCTCGACTCTCGAATGTCTCGATAATTCAAACAACTCTTTTGT CCCTTCAAATTCTCAAACCTTTTAAACGACTCTcgttcaatgaagtataa gcccgaaggcctagaagtcaatctccttggtaggatttgaagccaacaaa tcctaccaaagttgcgcggccttgagcggatcgcctggtttttacacaaa tgacagattgaaactaaaatttaccgctaaatttcgaattgctagattca atctgtcgtcaaaaatgcggcgcattttttaaggcttcactttttcttgc ctgagaaaggttagagattgaactttagcccttcgggctttaaactcaat gctctCGTTCCCCTCTTTAACTTACAGAGAAGATAAGaccatctttttta aaaaatatttttttcatgataGGCTCTTCGCTTTTACACTTTGAGGAAAa gaatgatgacagtgccgaaCTTTTTGTCATTTAGTTCAACTTTTACTTTC TAGCCTGGATATTATTCCAAGAACGGGACACGTTGCAAACCTTGCACCAA ATGTCACAAGGGACAAACAGAAACACACAAATGTGAACCCTCGCGTAACA CGCTCTGTCTCTGTGGAAAAGGTACGTCACTCTTTGTTACAACCGAAAAA TATAATGTAAAGACGTTGCTGGAACTTTTAAagagtttttgaaaattaga aacGCCTCAGATGCAATGGATaagccaaaaatattttcttggaGATTCTA AGGCTTAGTTTTAGGACTTTTTTATCGGGAACTtctaaaagttaatctga aacaCAATATAATTAGGTTGTCTTTTTGTCTTTCCAACAGGTTTATACGA GCGAGATGGTATTTGTAAAGAATGCACTGATTGTCCAGCTGGAATGTTTC AAAAACGCGATTGTGGACACAACTTGAATCGACTTTGCGAAAGCTGTCCT CAGGTAAGAAGATGGTGCATTTTTCCTCATTGCTTTTGAATCTATTCGAA TCTTTGACTTATGTGGATTAGAATGCTGATGTTAGTGCGATTGCcggagt ttttcttttgattttatgTTACCATTCAGTATCTAGGATATCTAATTTAA TCTGAAGAATATTGAAAATTCATCTATTTTTCCATCACGTTTCAGGGTCA CTACACGAACCATACTAACACGAAGAAATGCATTCCCAAAGTTCATACCA CTCGTAAGTTGATTTTGTACCACTCTTATGTTCTTCCTATTAcgagaatg aaaaaaattgtaattctAGCCATGAGGAACTACATAATTCGAATCATCGG GACAGAAAGACAGGGGGTGTAAATATTAGGTGCTAAGTTGAATCCGATGT GGAAACCCCCTGATAATTTCTAGGAATGGTGACTGGTTCTTTCAATACTG CTTGCCACTTGGCGGGACAAAGTTCTGTGAAAGAGTTATCTTcgtttgat ttcaaaatttttccattcTTGTGTATCAACCTTGTTAacaactttgaaac accctgtCTCCGTGGCCTGGGGAGAATTTTcttagccagtggggataaat tAACAAAGCAAAATTAAAATTGGCATTTCAAATGTTATTCTCTTCAGTTC AGTGATTTCCGAAATTGTTATGTTATTCCAATTTGGAATGAGACTCCAGT GTAGATTCTCAATAGAGATGAAATCTCTTGGGTAACTTAAAATCATCTTC CATTCCTTTGCACAGCAATCACACCGAAAGAATATCATTACCACACGTAC GATTGGAAACTCATCATCAGTCTGGTAGCTTTGGTCAGCATCCTTTGTAT CATCCTCGCTATCATCGTCTATTATGTTTTCCACAGGAAAAGAAGACAGA GGAATAGAGGTGAGgatcaaagaaaaaaatcagttttcaatAATATTTCC GGCCGTACTTGGTTATTAATGGAGTTCTTCTGCTGTTccaagctctagtt tagacagccGACTTTCTACCCTGTccattctaattgttagagtagggaGA AAAAGCGCACAAAGTTgggttaaaatctttgcttggaaaagtttgaaaga agacattgcattggcGTCAAAAGAGGACAATGCATTGAATTTAGACATCA CATATTATGTCCATTTAAATTCATAATTAGAaaaggcagggcgaaaagtg ggccgtataaactagagctaagagcTCTCGCTTTCTAGGGGTTCGAATGT ACAGTTGGTTGCGGTAAATCTGAATTTTACGGCTTTTGCTCTGaggtttt attttaaattatggATATTGGTCAATGGGTTTAAATTGTATGTATAAGCG TTGGAAAATCATATTACAGTttacactctctaattcgacattctactatt tGATACACCCCATTAATCGATAATATCGATGTCACCGTCAACGATAAACT ATCATAAACGACATTCTCTTATTCGATGAATATCCAATTCCCCttcaaaa tcgaattagagagcgtcaactgtatactCCCCTTTCCCTTATCAACTAGA ACAATATTCAGAGAACCAATAACTGATCTCTATAATTTCTTCTGTAGTCA TCACAAATCACGCGAACAACAATCACCAGTTTGAAGAAGAAATACCACTC AACTTCGAGATACCAGGTAAATACTTATCACCCAATTTAGCAATTCATGG TAGGTACCACTGCAATGAcatcacgaaattatgcaacttttctgtttgtt tttttactatgtttaagtgacgtattgggtggaaaattttcagaagaCTC TCTAGTGGTGTACATCATGAATAGTCACTTCCAAGAGATTTTACTTTAAT GAGTTTGTACGTTACCTCAAGAGCTTTTGGCCTgacaaatgcttttcttg tttAGATCACGAAGAACGCCATCAGTTAATGGAGAACATCCCTTATTCCG TGTTCGAAGATCTAGCTATGAAACTAAATCCTGAAGAGCCCAACAATTGG CGTAAATTGGCATCACATCTAGGTTTTTCACTtgaaagaattagaaacat tgCTTTAACGCCAAACCAGGCAACACAAGAACTATTGAACGAGTGGGTGA TCAACCCCAACTCTACAGCTTTCGTGCTTCACAACATACTGACTTTTATG AATAGGCCTGACGCTGCAGCCATCTTAGAACCACATCTCTACAGGGAAGA TATGTTTAAAGAGGAGATGAACTCAACAGTATAAATGTTCGGAGTTTGAA TGGAGAAGTTAAGACTGATGTTTGGGAAGACTTCGTTTATAGTTTGGTAC CTAGCTCGTATTACACTCTTTTTAATAAGAGATCTGGATCGATTCTCGTG TTTTTTCATCATTGGCAACAAATTGGGTGTGCACCTCACCTCTCACTTTC TTAGTGGATCTTCTCTGGGAAAGAGCTCCGCGAgaatgcaaaaatttgca aaatattggatTCGGAGTGAAACAAACAAATACGTAAAGTTGAACGACTG GGCTTTTTATAAAACGTTTCATATCAATGTATCTTGATAGTTTTGAacca aaatcttttgtttttcttgataGTTTTGAACcgaaatcttttgtttttcg aaactttttataggttaaagtgaaattttgttttattttggatGTGTTTT GCAGAATAATTGTCAGCTGGGTCAGCAACGTTTTCGTCAATCAATAAATC TTTGTCCGGAAAGTGGAATCTAAGCTGAAAGGGCTGTATAATTTAAATGA GGCAAGTGCTGATTGTGACGTAATGGTCTATAGCTACGCAATTATTATAT GCGAGGACACATAGTTTTAGCGAAATGCATTTAGTTAGTTAACTTTATCT TTTACTTTATCTTTGAGTGATCTTTTTCGTTTATTTGGATCTTTTTAGTT TATGTTTGAACCTGTTCAAAGCGATCAGATCAATGACCATGCTAACCAAC TGCTCTTGACGAAGTGGTAATTTTAAACGTTCCTAATTGTACGTAAAGCT ATGAAAGTACAGCTGACGCTCCCTAATCCGACTTTCGAGGGcaattagat tttcatcgaataagggagcgtatcgaaaagtagagcgtcgtttatgagag tttcttgttgacagtgaatttcaatattatcgaataatagaacgtcaaat tagagagcgtcaattgtACTAACTTTACAACACAAACCAATTTTAATATC GCTTCATCGAAAGGTATATAAAAAATGTTGGGCTAGGAACCAAAAGTGTA TTTTGAGACAGCCAACCACTCCTCAATCACGAATTCTTTCAAATTTGCAA GCTCATTGTTTGAATATGCAAGGTGAAAATTTTTAGTTCagtttttagtt atttttaagAGAAATTCACAAAGTTTatatatttctcttttttttgcaaG CAATGTAGATATTGAAAACACAGAACATTATTATAACATGCTACGTACTA ATTACGTTATACGTGCGTAGTAAGCTCTTCTTATAATATATAAATTATAT ATGGATTACATAgtgtattatattattttcttacatttttttgcgATGCT ACCCCCTACTGAACAAGTAGTAATAAAATTTTTCGTGTTAATGAACTCGT TTTGTTTGTCCTCTTCGTTGTCCTTATTGAATTTACTGTTACTCGCCCAA AATGCCATCTATCATGCCCAAGGGTGTTGGAATTGAATGTTTCCATCTGC CAAATATTGGTTCAAACAAAGATGATGTCCTTCAACAGGGCAATCCTCAA AACGAGGCTTTGTGACGTAATCTCCCCAACTGTTGTAGCCTCGATTCGAA CCGCCATCTATCCAATGTTTAGCATGTTTCAATACATCATAACCATAATG AGAACGGGCGTATAATCCAGGATTAGGGCGGTTTGGAGACCAGTGATCTC TCATATGAACTTTAGTGTCTTCACCGATTATTCGGTTTGGCGGGAAAACG TTTTTATAAAACGGGTGTAAATTCCACGGCTGATAGAAATCACCTATTAA AACGTACTCTCCCCATGCTTCTAATCGCCAAGTGTTGCCCCTGACTCCGA TATAACCACATGTCCACTTCGGAGAATCGCCGATTAATCCGTTTGACACA CTCGCATTCTTCAAGCATGGTTTGTCGATGTCTGTTTTGAAATGCATTCC TTTGAGCCCGAACTCGTTCTCGTGTTTTAAGAGATCAGTGAAATTGGACG CTCGGAAAGCGAAATCTTGGTCGAGGTCCCATGGGAGAGTATCATCCAAT TTTGTGGCTGCCATC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007039TCONS_00007039Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00007039-proteinTCONS_00007039-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000073supercontigsc0000073:384562..391326 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
30.97 30.29 9.48 7.07 32.26 24.95 22.04 24.81 18.95 31.03 20.74 18.01 20.85 22.03 12.83 11.84 18.69 25.53 21.3 20.15 22.71 24.31 24.92 25.77 37.53 34.36 20.49 17.79 10.97 12.36