TCONS_00007039-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00007039-protein
Unique NameTCONS_00007039-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length319

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00007039-protein ID=TCONS_00007039-protein|Name=TCONS_00007039-protein|organism=Clytia hemisphaerica|type=polypeptide|length=319bp
MDPIIVFTFLFTISLVTKVNSSPAKFCHPGYEVGEDNKCRACQPGYYSKN
GTRCKPCTKCHKGQTETHKCEPSRNTLCLCGKGLYERDGICKECTDCPAG
MFQKRDCGHNLNRLCESCPQGHYTNHTNTKKCIPKVHTTPITPKEYHYHT
YDWKLIISLVALVSILCIILAIIVYYVFHRKRRQRNRVITNHANNNHQFE
EEIPLNFEIPDHEERHQLMENIPYSVFEDLAMKLNPEEPNNWRKLASHLG
FSLERIRNIALTPNQATQELLNEWVINPNSTAFVLHNILTFMNRPDAAAI
LEPHLYREDMFKEEMNSTV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_003936XLOC_003936Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00007039TCONS_00007039Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001368TNFR/NGFR_Cys_rich_reg
IPR000488Death_domain
IPR009030Growth_fac_rcpt_
IPR011029DEATH-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001368TNFR/NGFR cysteine-rich regionSMARTSM00208TNFR_3coord: 80..115
e-value: 0.0049
score: 26.1
coord: 42..78
e-value: 2.2E-4
score: 30.5
IPR001368TNFR/NGFR cysteine-rich regionPFAMPF00020TNFR_c6coord: 42..78
e-value: 8.9E-8
score: 32.3
IPR001368TNFR/NGFR cysteine-rich regionPROSITEPS50050TNFR_NGFR_2coord: 41..78
score: 11.628
IPR000488Death domainSMARTSM00005DEATH_4coord: 213..305
e-value: 0.0056
score: 25.9
IPR000488Death domainPFAMPF00531Deathcoord: 230..302
e-value: 9.1E-10
score: 38.5
IPR000488Death domainPROSITEPS50017DEATH_DOMAINcoord: 241..305
score: 13.428
NoneNo IPR availableGENE3D2.10.50.10coord: 14..64
e-value: 2.7E-9
score: 36.6
NoneNo IPR availableGENE3D2.10.50.10coord: 65..85
e-value: 2.4E-7
score: 30.3
NoneNo IPR availableGENE3D2.10.50.10coord: 86..127
e-value: 4.0E-13
score: 48.7
NoneNo IPR availableGENE3D1.20.1070.10coord: 128..205
e-value: 4.4E-4
score: 18.5
NoneNo IPR availableGENE3D1.10.533.10coord: 216..305
e-value: 2.6E-18
score: 65.7
IPR009030Growth factor receptor cysteine-rich domainSUPERFAMILY57184Growth factor receptor domaincoord: 20..135
IPR011029Death-like domainSUPERFAMILY47986DEATH domaincoord: 211..306

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00007039-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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