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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000049:1661571..1669399- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00062541 ID=BlTCONS00062541|Name=BlTCONS00062541|organism=Branchiostoma lanceolatum|type=mRNA|length=7829bp|location=Sequence derived from alignment at Sc0000049:1661571..1669399- (Branchiostoma lanceolatum)
TCCACAACTCCTCTCCGACAAGCCGGAATACAGGTAGGTACTTATTCTGA
TCTTGCTGTTGTTGTTGCATAAATCGAAGATAGAAATCATGGAAAGTTGG
CCATAGATAGGTTTGATGCGGAAGATTTGTCGTCTTTTCTCGACTCCATA
AGTTGCTGAACAATAGGCCTAAGGCAGATGTGCCATTTGTAACGAAATCT
ATACCAAGTCTTCTGATGAAATATTTCCGACATTTAGGACAATTTATACT
ATTTCTTTCAGTCCTGGTGTATTATACTGACGGTTATGCTGCTTGACCGA
TTCAAATTCTGCCGATTCATATGAAGCAAGATTCTGCTTCAAATGTTGCG
TTGTTCCCTCCAGAAGCGGCCCTCATAATAGGCTATATATTTACGTTTTT
TAAAGAACAAAGGATGTTGAATGAAACTACTGAAACGATGTTATGTTTTA
GCTTCTTTCTATCAAAGTTGCGCTTGACCAATCCATTCCCACGTTTTAAA
ACGGAATGTGGTTATCGATATCACGGCGGTACATTTCATATGAAAATGGG
AAATTTAGGTTTTATCGATCTATATGGGTCACAATGTACATGCTAAACCA
ATAAATAATTAAAATATAGGTAGCTCCAGCTATCATCAGCTCCGGTTATT
ATGGTGGCCTACAGCTAGGTCAGTTTAATTTGCCTCCGGCATCGGATGGT
CAGTTTCTCAATGGTTAGTTGGAGAGGTAGGTTAAGTCGCCAGTTATGAA
CACATTTAACTACATCGTAGTTTGCTGAATTTTGATACGTCTTAGTTGCC
CTCTTTTGCAGCTGGACGCACAGAGGACCGCCTATTTCCCTGGTAATTAC
ATAGACATGTTACTGTGTAATTTCTACCATGTTTTTCAGTCCTGGTGTGT
TGTAATGACGGTTATACCGCTTGACCAATTCAAATCCAGATTTTGCTTCA
AAGGTTTCAAAAATCTTGTTTTATCTCTAGCTACGTTTTTCTCTCCAGAA
GCAGGGCATTTCACACGTCGAACGACGGCCCTCATAGTAGGCCGTAAGTT
GTCTATTCGTGTCTATTCTCAACTCCATAGTAGGCTATGGTTGTCTATTG
ATTGTCTATTCTCAACTCAATAGTAGACCGTTTGTCGTTTGTTGTCTATT
CTCAACTCCATTAGCCTGGAATCCATCCTATTTAGCTTCCGGCCGCTACC
CAAGCTCCGCTGCCTGGCGCCGGAAGCTAAATAGGATAGATTCCAGGCTA
CAACTCCATAGGTTGCTGAAAAAAATAGGTTGAATAACTTGCCAAAGGCG
TTAGTTGGACAGATTTTCAATTTGTAACCATATACTACAATGGCTCTCCA
CGTCCTCTGATGAAATATCCCCCACCCACCCCCACCCATTTTGAGCAATT
TCTACCATATTTGTCAGTCCTGGTGTGTTACAATGACGGTTATGCCGCTT
GACCATGTACGTTACAAATTCAAATTCAGGACATTCAGATACTGCTTCAA
ATGTTTCAACGGGTCATGCCCAACTGAAATTCTTTGTTTTTAATTTTTCG
ATCAGTTGAAGCGGGTCGGTGGGAGTTGACAGAGAGGGATCAAGATGGCC
AACGGCAACACGCCAAGCAAAGTGATCTTCGTCGTGTTCGGAGTAGTCCT
GGGATATACTCTGTCTTTGCTGCACAACTTCGGCACCACCGTCGATACCC
ACCCTACTGTCAGCCACGATGTGCCTGTTCGCTCTTCTTTAGACGAGTCT
CTTCGGTAAGTAAAATCTCAACAGTACTGTGTTGTGTTGTTTTGTGATGT
GTTGTGTTGTGTTATGTTGTGTCACATGTGCTGTGCTGTATTCTGCTGTG
CCAGTTGTGCTGTGTTTTAATATAAATATAGACGACTGCGCTTGGCCACC
ATTAATCATTTTGTTAACGTCCCGATTGTATCTTCGTAAATTGTTAACCC
ACTTTTAGATATCGAACCTATACTATAGACATCTAAGAGTTGGATTGAAC
AGAAACATTTCTAGCAACTAACGACTTATTGATCGATGTAGGCCGCCACA
GATACCACTACAGATGCCACAGATACCACTACAGATGTCACAGATACCAC
TACAGAGGGATGGTAGTGTACCGCGACAGGGGGGTGGTAGTGTACCACTA
CAGGGGAGTGGTCCACGGAAAATACTTCTGGACTGCGGAGCTAATGTCGC
ATCTACTGTGCAGGTAAGAGAACGTTTACTTCTTTAAAAGAACGTTCTAG
GAAACTCACGGTTTGGCTTCGTGATGAAGTAAATATGTTGAAGAAAAACA
AATATTTCTTCATTCATAAAAGTGGTAAGTGAGAAAAATCATGTCAAATA
TGTTCCGTTTCCAAGCAAGCGGCAAATGTTTCACCGAGAAAAAATCCTTG
GTTTCACCCGTTGTTGTTCAAGATACTGTCGAAGTGAATAGCTTTGTTAT
TATATAGACACAAATGACTAGATTCAACCAAGGACCTGATTCAACTCTCA
TACATCAAATTACATATGAAAAGGGAGAAAGCGTACAGGAGGAGTCTCCA
TGGGAAATGAAACATGACAAAAGATATGACTTGGAAATGTTTAAGTTTCT
TTCTGTTCCCTTTTGGGACTTGAATTCAGCAGCCTTAATTTGGTACGCAT
GATGTTTCACATTATACTGTTACATACCCTCCTAGAAGATTGACGTACAA
GATAAATTACCGTATACAGTGTGTTAATTCAAAATACATAAATTCTTGGA
ACAAAAAAAACAACAACGAAGTACTAGTATTATGGAAGAACTACAGGTGG
TTGGAAATTCAGCTTATATATCTTTAGAGTGATCTTTGTTATAAGAGGTA
AGATATCAAGTATCGAGACTTCTATTGTTCTGGTACACACAGTTATTCCG
GGAGACATACCCTGATGGAAAAGATTACATCATCCACTCGTTTGAACTGG
ACGCGAGGCTGGCGCCCTACTTCGCATCCTACTCCAACCACGTCCTGCAC
TGCCCAGTCGCCGTGGCGGGGGAAGATGGTCAGTCATGCCACCCTTAACA
CTTTTCTACAGGTTTAGTTTAGGAATGGATGTATCTTCTTCCTACTGCTT
AACCCTGTAACCAATAGATATTTTGTGTCAAACAGCTACTGCAGTAGGGA
TAAGGTTTAAGGCTTATACTAATAAGCTTGTACATTTGCCTGTAATGCTC
TGTAAATATACTTTCCTTGTATTATCACATTGTAGTAAGGTGTTCTCTCT
TTTTGTATCATTAGTTGTTTACTTAATGTTGTGTTGATATATATGCATAT
GTCTATGACTATGTTTAGTTTCACTTAAGTGTAGTTTCATTTTGAATTGA
TATTTTCATTATGTAATACAGTGTACATATTACTCAATTTGTTTATTTGA
TTTTTCGCTATAATCTTAGTTACCTGGGTGGCTAACATATAAGCTTGCAA
GCTTTCGACCCCCCTCGCACATTTGTATTAAGATTTCTTATTGTTTTCAC
TTGTGTCTTTGACAATTAATCAATCAACTCACTTTTCAAAACGAGGGCTA
TATTTCTGTGTGATTTTATCAGCCTAGGCGTGTAGAACGTTGACATATAG
AATAGTTCAAAGTTGAAACGTGAAATAAACGCACGAATTTCCTTATCAGG
AAATATCACGGCCTACGCCGAGTCAGCCTGGAAACCGGACAAGGGTGCAG
TCGCTGGCAAGGACATGCAGTGGGGAGGGGGGGCCATCTACGCCTCGGAA
TCAGAGAAGCAGGGCGAAATTCACGGCCGACGATTCGGTGTACGAAACGT
CATACCAATGGTGGATCTGTCCACGTGGATACAAGAGAACACAGGTATGT
TATAAATTATATATATATATATATATATATATATATATATAGAGAGAGAG
AGAGAGTTCAGGCACCACATGTAGCGCGACACATACCTTTCCTCGGATGT
TCTCTAATCATTTGGTAACTGCTATTTCAGCCATATGTCAATACGGTTGT
CAATACAGTCGATAAGGCGATAGGTAAAACTGACATATGTTTGCTTGTAG
TTAGCATGGTCACTTCAAATTAGTTTATAATTTTAGTCATTGCCATTTAA
TCATACAAAGTTGCTATCGTCCGTACCCTGTGACGAAGGGTATCACCAAT
GTTTTCTCCTGAGAGCCGTTGTAGCCATTGAATTTCATCAGGGGCTTCAA
GTACATCTACCTTACATGCGGTTTCATACTAAACTCTTTTTTGACATGTC
CAGCCTTGGAAGACTACGTCATCTTCAAACTTGACGTCGAGGGAGCAGAG
TACGACATCCTGGAGAAGATGGTCAAAGAAGGGACCTTCAAGTGGATAGA
CAAGTGCGTGCATTGCTCCTCTATATGGCTTTCACTTAGAGCTTAGTATA
TATTAAGTCGACTCTACTGGACTAGCTTAGTTTGATAACACGTTTGCTTA
CTCTATATGTTTACAGCTTGTACTGTTGTATTTATGTCCTTGTATGTTCC
ATGTGTTAAATTAGACGACCTGTACCTAGCCCATCGGGGCATGAATGCAT
AATGAGGGTCTTTCATTCATTCATTAATGTAACAATTCTTTACATTTGAA
ACCGCATCATCTGACCGTTGTTGCTTAACAGTATCTACTAATATGTAACA
ATACTTTACGTCTGGGACTGCGTTGTTAGCAGTAACACCTAGCTTCAGTG
CACTGTGAACTAGTCAGTATTGTCCTGGTGAAGATGACAGGCAGTCATCG
AAACATCAGCTCTTGTGAGTTGTAAAATACTTGGTTGTGAATAAAAGAAT
AGTCTTGCTATTCAACATTTCGAGATGTTAAAAATGCATCCAATAGACCC
CTTTCCAAAGTCCGGCGCCATTTTGAGTCTGGTCTCGCGAGAGCACATTC
TAGTGCGCGCGTGACTTGATGTAAATGTAAACCATGTATTAAACGTTAAA
CATTTACAGGTTTTATGGCGAGTTCCACGACTCGTTCCCTATACCAGGAT
GGTCAACACAAAGAAAACAAGGTCTTAGGAGTACTTTGAAGACCAATGGG
ATCAACATGCTTGACTGGGCAGGAGAGTACAAAAGATATGAAGACATGGA
AGCCATTCACAAGGTTGACGTAAGTACAGCGGGGATGCACATGTAACGCT
TTCTGTCCACAACTCGTCATCTAATCATGGGATACTTGCACATGTAAAAA
CATATAAACAAATGCATAGATTCCAGACCCTAGGTGCCTGTAGGCTAACA
TACAGATATGTTAACGGAAAGGGTTAAAAAATCGTATTGAGACGTACATC
ACTGATAAGAAGGGGTGTCATAGAATGGTTCTCTTGATTTTGGCTGTGTC
TTATATAACGTTCGAGGGGGGAACATCTACAGATGTAAAATTGGGGATAT
ATGAAAGTTTCTTGCAAATTTCTGCCCGTAGGCTAATTGTACGTACATGT
ACATGTAACACGGGGTGGACGGACAGACACATGCAATGATAAACAATAAA
CTTCGGTTCTAACTTATTGGGTTCGGCTTCTTTTTCCGAGACAGTAAAAG
ACGAATGATCCAACTGTTTCTGTAATATGTGGGTTTTGTGATGTTAATAG
GTGAGTAGTTTTCTTATCGACTGAAAACGTGGAGAAATTAGGATTGAAAA
TGGCGGCCTCTTTAAACAGCTGATGAAGATAATGAAGATCACCTACTGTC
GGTTGTTATAGATCCCAGCTGGTACCCCTGGAACTGCTGGCGTGGCCTAC
TCCAGCTGTTCTCCCGGTAGTCCTGCCCGCCTGGCCCTGACGGTGCAGGT
CGGGATGAACAGGAAGGCGGCCCACAAGCTAGTGGAGACCATCCGGGCGC
ACCCCAGCAACATGCCGGTCACGCTCTTCGTCTACGGGGACTTCGTGCAG
GACTCCCCGGACCTGATCACCAAGTGGGCCGACAGATATACGATAGGAAT
ACGAGAGGTTCGTTGTCTTCCTTTGAGTACGACTAGTAATTTCCATGTAG
AGCTTCCAACAGACTGTATGTACAGTATGCATTCTTTAGTACGAAGAAAA
TACATTTGTTATGAAGATCACTTCCATCAGCAGTCTAAAGAATCATTAGA
AAAGTACAGAATGTCAAAAATAGCAGGGCTTACCATTTGAAATAAAAACA
AATCAACAGCGGATGTCGCTTGAAGACAGAAGGAAAATGGCCTGTCTGTA
CATGATGTACAAAATTACTGGTGGACGTACCTACGACGTACCCGAGCAAG
CAGCTATAGAACCCATACCTACACCTCTACTTTCTTACATCACAAGCTCT
CCACCACTATAAGAATTAAGACAAAGACCGGAAGTTTTGCTGCAGTACCA
AGGTCACTTGCAGTACAGAGCCCCAGACTATACTTTGACTACCAAATAGA
CGCCACAGTTATAAGACACCATATTTCAGTTTTGGAGACACAACTATCAA
AAAGCTAGTTCAGCTGTGAGGACTTTTTCCCGCGAATATTTCACATTTTA
CAGTACGTCGAAGGGCGGTTATACCAATGTTAGTACCATCATTAATTGTT
TTGAAATCTCCCCCATAGAATGCGCCCTTTCCAGCAGACCACTGGGTCCT
ACAGAACGCCGACGTGATGAGGATGAGTCTGATATCGGCCGTGCAGCGGA
TGAAGGAAGTGGGGGTGCGGCCAGCCTATTACTATCCGGACGGCCTGTCG
CAACGGGTTCAGGATACAGCAAAGAGCAGAGGACTGAGGCTCATTCAGCC
GACAACCAAGTTCCCTCCAAACCTTGGTAAGCCGCTTATTTGTCCATCAT
TTACTAATTTTACACATAAAACATAAGAAATACAACTTAACATACCATCA
CACAACTTGAAATAACGTAACGTAAAATGATAAGAATATATTTGATAAGA
AATTTTCCAGAATTGAAAATAAAACCAAATCACGCAAGAAAACATAAATT
TTGGTCGTCGGAGTTAGGTCAAACTATAGCCGATTCTTAACCTTAGTCTT
CTCAATATCTTTCTCTGAATCTGAAATCTAAGTCCAAACTTTAATCCTTA
TTTCAGGTACGTTGTTGAGGGAGGATAACTACTATCGGTTCAGAGACGTG
GAGAGGACACCTAAGGCGCTCCGGATCCTGTATGAACGCATCTCGAAAGG
AGGGATTCTCAGTCTGGACACTGACCACCCAGACAGCTACATGATCTCAG
CTTTCCTCATGGACTACCTGTACGAAAACTCCGGCTTTCAACTTGTCAAT
GTGAACGACTGTTTGAACTGATAGAGACGTTTTCCGAAAAGCATGCACAA
TATTTCATATTTATTCGATGGACTACAGATGATATTGTGTTTGAGGTTGA
AGATTCCCTCAGTTGCTTCGGTATAGATCTGTGCCATTGTTAGTCTTAGA
GGTATGATTATCGTTTTGGCAGTAAGAGGTCAATCAGTCCTAATCTCTCC
TGCATGAAAGTAGATATTCGTGATAGAAGCCCTCTAGTTGACGATTTTGA
CATTATTTCCCTCACGAGTGAGTTTCGAAGGGCAAGGGGCTTAGCAAAGC
TGACTGGGGGGCGTCATAATGTAAAAGAATAATATAGTCAAATTCATTAC
AACACGACCGTCGTAAGAACTGTAAAGTGATAGTCATTAGAAACTGTGAA
ACTGTTTTCCTGACGCATGGCCTCAAAAAGTGTTTTCAAGCATGTGAAGC
AACACTTCTCTTAGAGAACAATAGCCCTTATTGATAGACTAACAAAAGTA
AAGGGTCTTTAAACTAGTTTTATCTCCATGAAAAAAGGCTTTTTCATGGA
GATACTGTTTTGCTTGCAATTGCGTTTGG Coding sequence (CDS) from alignment at Sc0000049:1661571..1669399- >BlTCONS00062541 ID=BlTCONS00062541|Name=BlTCONS00062541|organism=Branchiostoma lanceolatum|type=CDS|length=1593bp|location=Sequence derived from alignment at Sc0000049:1661571..1669399- (Branchiostoma lanceolatum)
ATGGCCAACGGCAACACGCCAAGCAAAGTGATCTTCGTCGTGTTCGGAGT
AGTCCTGGGATATACTCTGTCTTTGCTGCACAACTTCGGCACCACCGTCG
ATACCCACCCTACTGTCAGCCACGATGTGCCTGTTCGCTCTTCTTTAGAC
GAGTCTCTTCGGCCGCCACAGATACCACTACAGATGCCACAGATACCACT
ACAGATGTCACAGATACCACTACAGAGGGATGGTAGTGTACCGCGACAGG
GGGGTGGTAGTGTACCACTACAGGGGAGTGGTCCACGGAAAATACTTCTG
GACTGCGGAGCTAATGTCGCATCTACTGTGCAGTTATTCCGGGAGACATA
CCCTGATGGAAAAGATTACATCATCCACTCGTTTGAACTGGACGCGAGGC
TGGCGCCCTACTTCGCATCCTACTCCAACCACGTCCTGCACTGCCCAGTC
GCCGTGGCGGGGGAAGATGGAAATATCACGGCCTACGCCGAGTCAGCCTG
GAAACCGGACAAGGGTGCAGTCGCTGGCAAGGACATGCAGTGGGGAGGGG
GGGCCATCTACGCCTCGGAATCAGAGAAGCAGGGCGAAATTCACGGCCGA
CGATTCGGTGTACGAAACGTCATACCAATGGTGGATCTGTCCACGTGGAT
ACAAGAGAACACAGCCTTGGAAGACTACGTCATCTTCAAACTTGACGTCG
AGGGAGCAGAGTACGACATCCTGGAGAAGATGGTCAAAGAAGGGACCTTC
AAGTGGATAGACAAGTTTTATGGCGAGTTCCACGACTCGTTCCCTATACC
AGGATGGTCAACACAAAGAAAACAAGGTCTTAGGAGTACTTTGAAGACCA
ATGGGATCAACATGCTTGACTGGGCAGGAGAGTACAAAAGATATGAAGAC
ATGGAAGCCATTCACAAGGTTGACATCCCAGCTGGTACCCCTGGAACTGC
TGGCGTGGCCTACTCCAGCTGTTCTCCCGGTAGTCCTGCCCGCCTGGCCC
TGACGGTGCAGGTCGGGATGAACAGGAAGGCGGCCCACAAGCTAGTGGAG
ACCATCCGGGCGCACCCCAGCAACATGCCGGTCACGCTCTTCGTCTACGG
GGACTTCGTGCAGGACTCCCCGGACCTGATCACCAAGTGGGCCGACAGAT
ATACGATAGGAATACGAGAGAATGCGCCCTTTCCAGCAGACCACTGGGTC
CTACAGAACGCCGACGTGATGAGGATGAGTCTGATATCGGCCGTGCAGCG
GATGAAGGAAGTGGGGGTGCGGCCAGCCTATTACTATCCGGACGGCCTGT
CGCAACGGGTTCAGGATACAGCAAAGAGCAGAGGACTGAGGCTCATTCAG
CCGACAACCAAGTTCCCTCCAAACCTTGGTACGTTGTTGAGGGAGGATAA
CTACTATCGGTTCAGAGACGTGGAGAGGACACCTAAGGCGCTCCGGATCC
TGTATGAACGCATCTCGAAAGGAGGGATTCTCAGTCTGGACACTGACCAC
CCAGACAGCTACATGATCTCAGCTTTCCTCATGGACTACCTGTACGAAAA
CTCCGGCTTTCAACTTGTCAATGTGAACGACTGTTTGAACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00062541-exon-Sc0000049-1564993656:1669367..1669399 | BlTCONS00062541-exon-Sc0000049-1564993656:1669367..1669399 | Branchiostoma lanceolatum | exon |
| BlTCONS00062541-exon-Sc0000049-1564993656:1668357..1668419 | BlTCONS00062541-exon-Sc0000049-1564993656:1668357..1668419 | Branchiostoma lanceolatum | exon |
| BlTCONS00062541-exon-Sc0000049-1564993656:1667645..1667844 | BlTCONS00062541-exon-Sc0000049-1564993656:1667645..1667844 | Branchiostoma lanceolatum | exon |
| BlTCONS00062541-exon-Sc0000049-1564993656:1667187..1667358 | BlTCONS00062541-exon-Sc0000049-1564993656:1667187..1667358 | Branchiostoma lanceolatum | exon |
| BlTCONS00062541-exon-Sc0000049-1564993656:1666372..1666507 | BlTCONS00062541-exon-Sc0000049-1564993656:1666372..1666507 | Branchiostoma lanceolatum | exon |
| BlTCONS00062541-exon-Sc0000049-1564993656:1665556..1665750 | BlTCONS00062541-exon-Sc0000049-1564993656:1665556..1665750 | Branchiostoma lanceolatum | exon |
| BlTCONS00062541-exon-Sc0000049-1564993656:1665047..1665146 | BlTCONS00062541-exon-Sc0000049-1564993656:1665047..1665146 | Branchiostoma lanceolatum | exon |
| BlTCONS00062541-exon-Sc0000049-1564993656:1664281..1664440 | BlTCONS00062541-exon-Sc0000049-1564993656:1664281..1664440 | Branchiostoma lanceolatum | exon |
| BlTCONS00062541-exon-Sc0000049-1564993656:1663443..1663688 | BlTCONS00062541-exon-Sc0000049-1564993656:1663443..1663688 | Branchiostoma lanceolatum | exon |
| BlTCONS00062541-exon-Sc0000049-1564993656:1662624..1662831 | BlTCONS00062541-exon-Sc0000049-1564993656:1662624..1662831 | Branchiostoma lanceolatum | exon |
| BlTCONS00062541-exon-Sc0000049-1564993656:1661571..1662343 | BlTCONS00062541-exon-Sc0000049-1564993656:1661571..1662343 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000049 | genome | Sc0000049:1661571..1669399 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF030745 |
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