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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043399 ID=TCONS_00043399|Name=TCONS_00043399|organism=Clytia hemisphaerica|type=transcript|length=1288bp
GTCGTTCTTTTACATTTTAGCCCAAAGTATTTACGTCTACGCCTAAAGCT
TACAAACCATCAGATGAGTGCTCAAAAAGACACGTTCAACGTAGGAACAA
GCGAACAAAGAAAACTCTGGAGTTTTCAACAGCAACTTCTGCATCTAAAC
AAACGGGAATTTTTGTTAAATCCTTCTCCAAAGGGCAACGTAAGATAATT
GCCGATGTTTCTGGTCTTGTTGAAGTAAACATCACTGCGGAGGAAATGTT
GGCTCTCAAGTCGAGACTAGGTGTACCATGggaaatgttaaaaacaattt
caaGGTGAGTCCTATTAGAAAATGTACTTAATCAATATACTAACTAGTCC
TAAGTGGTAAATAATATGacatacaaaaaatataaaaccttGAGAAAAAT
AACCGAGTTCCTACTTCTTCAGANATGacatacaaaaaatataaaacctt
GAGAAAAATAACCGAGTTCCTACTTCTTCAGGTTTCTCATTGCGAAGAAA
ATCAAACTTGGTTCACAAGCTGAGCAAAGGAAGATACACACACATTTGCA
TGGGACTAATTGgactgtcgaaatggcaatgTTCACAAAGAAAGACAAAG
TTAAAGATAAAATCAAAACTCAAGAAGCAGCATGGTCCTACATCTTAGAT
ctcaaaaaacacatttttgaTAGACTCGGTGAaatgaaaaagtaaatttt
gaattttttcatcacCAATCGTGATCCCTTAGCTTGATTTTATGTAATAT
TTCTGTCTGGAAAATTTATTCTGTAATATTTCTGCCCAATAAATTCATAT
AAAGTATATTTTATANGATAGACTCGGTGAaatgaaaaagtaaattttga
attttttcatcacCAATCGTGATCCCTTAGCTTGATTTTATGTAATATTT
CTGTCTGGAAAATTTATTCTGTAATATTTCTGCccaataaatttatataa
agTATATTTTATGATCTCTACAGGAACAACCAACTGAAATTTGAAGGTTC
GATGAAGGATGAAATTCATGTCAAAATAGGTGGTGATCATGGTGGTCCGA
CGTTCAAACAATGTTACCAGATTATCAACTGTGATTCGCCAAACAGCAAA
AACAACACATGCATGTTCAGTACCTTTGACGGTAAAGACTATCGTGTCAA
TCTTGAAACGTCACTTTCCCGTTTCACAAGTCAAGTGTGTATAGTCCCGC
ATGTATATAGAGCCTTATATCTCCATCATAGTTTATATTTAGGGTAGTGT
GACACTGAAAAATATATCATTAGCATACAACTTATACA Run BLAST on NCBI transcript from alignment at sc0004192:1..1288- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043399 ID=TCONS_00043399|Name=TCONS_00043399|organism=Clytia hemisphaerica|type=transcript|length=1288bp|location=Sequence derived from alignment at sc0004192:1..1288- (Clytia hemisphaerica)
GTCGTTCTTTTACATTTTAGCCCAAAGTATTTACGTCTACGCCTAAAGCT
TACAAACCATCAGATGAGTGCTCAAAAAGACACGTTCAACGTAGGAACAA
GCGAACAAAGAAAACTCTGGAGTTTTCAACAGCAACTTCTGCATCTAAAC
AAACGGGAATTTTTGTTAAATCCTTCTCCAAAGGGCAACGTAAGATAATT
GCCGATGTTTCTGGTCTTGTTGAAGTAAACATCACTGCGGAGGAAATGTT
GGCTCTCAAGTCGAGACTAGGTGTACCATGGGAAATGTTAAAAACAATTT
CAAGGTGAGTCCTATTAGAAAATGTACTTAATCAATATACTAACTAGTCC
TAAGTGGTAAATAATATGACATACAAAAAATATAAAACCTTGAGAAAAAT
AACCGAGTTCCTACTTCTTCAGANATGACATACAAAAAATATAAAACCTT
GAGAAAAATAACCGAGTTCCTACTTCTTCAGGTTTCTCATTGCGAAGAAA
ATCAAACTTGGTTCACAAGCTGAGCAAAGGAAGATACACACACATTTGCA
TGGGACTAATTGGACTGTCGAAATGGCAATGTTCACAAAGAAAGACAAAG
TTAAAGATAAAATCAAAACTCAAGAAGCAGCATGGTCCTACATCTTAGAT
CTCAAAAAACACATTTTTGATAGACTCGGTGAAATGAAAAAGTAAATTTT
GAATTTTTTCATCACCAATCGTGATCCCTTAGCTTGATTTTATGTAATAT
TTCTGTCTGGAAAATTTATTCTGTAATATTTCTGCCCAATAAATTCATAT
AAAGTATATTTTATANGATAGACTCGGTGAAATGAAAAAGTAAATTTTGA
ATTTTTTCATCACCAATCGTGATCCCTTAGCTTGATTTTATGTAATATTT
CTGTCTGGAAAATTTATTCTGTAATATTTCTGCCCAATAAATTTATATAA
AGTATATTTTATGATCTCTACAGGAACAACCAACTGAAATTTGAAGGTTC
GATGAAGGATGAAATTCATGTCAAAATAGGTGGTGATCATGGTGGTCCGA
CGTTCAAACAATGTTACCAGATTATCAACTGTGATTCGCCAAACAGCAAA
AACAACACATGCATGTTCAGTACCTTTGACGGTAAAGACTATCGTGTCAA
TCTTGAAACGTCACTTTCCCGTTTCACAAGTCAAGTGTGTATAGTCCCGC
ATGTATATAGAGCCTTATATCTCCATCATAGTTTATATTTAGGGTAGTGT
GACACTGAAAAATATATCATTAGCATACAACTTATACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043399-exon-sc0004192-1575043694:1..1288 | TCONS_00043399-exon-sc0004192-1575043694:1..1288 | Clytia hemisphaerica | exon |
| TCONS_00043399-exon-sc0004192-1510915933:1..1288 | TCONS_00043399-exon-sc0004192-1510915933:1..1288 | Clytia hemisphaerica | exon |
| TCONS_00043399-exon-sc0004192-1491911889:1..1288 | TCONS_00043399-exon-sc0004192-1491911889:1..1288 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004192 | supercontig | sc0004192:1..1288 - |
Blast
The following BLAST results are available for this feature:
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