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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043281 ID=TCONS_00043281|Name=TCONS_00043281|organism=Clytia hemisphaerica|type=transcript|length=955bp
GAATGGTGAATTctcaaaattagtttttgaaGTCTGAATGGTTTCCaatt
ttaatttcataaaaTCTGTTGTGCTGATATGATATCTTTTGTGTCTTAAA
AGAAATAAAGCTGCAATTTATTACTATacatttataaaaatcaaaattat
cttaaaatgacatttcttgaaaattatttatttactCATTATTCACCATT
GCtgcaactttttttataattattacATACATAACTTCCAAGCTCAACAC
ACTGAACTAAAGCTCTTGTTTAGATCTGCAACATGTTATTTAcatgtttt
aaaagaaaaactgttGTTACTAGTATAATGATGTTAGTATTTACAGCTCT
TAAACATTGATTAAGTAGGTTTTAGACCTTAAAATTTGTTACACTTTTGT
AAAATATCACCACATAAACGCTAATCTTTTATCTTAAATTTTgataggaa
aatatttttgtgaaattataattttttgtaaaagagatATTATATacctt
ttctgtttttttttgctgatcTCCGTTTGCATCCTGCAGCTATCTATCTT
GAAACCCATGACACAATCTTGTATCTAGCTTAAAAATTTAGCTTGAATTT
TACAcgtattttgacaaaaaaaattctctttttttatttaccgtaaaaaa
ataagaacgcaATATCACAAAATGATGAACAATGCTTTACAAACATACAA
TGGGGAACTATCTCTCATCACCAGACCAATGCCAAAAGTGACGTCACCAA
ATGATGTTTTGATTAAAGTGACCCATGCTGGGGTTTGTGGAACTGATTTA
TCCATCATTGCTGGTCGATTTGAAGCAGCAAAGAAAATTATACAAGGTCA
TGAGTTCTCTGGTGTTGTCTCTGATATTGGTGCAAAAGTCAAACATCTAA
AGATTGGTGATAGAAATGCAAGCAGGGGGAACTATAGGAAAGGAACAAGG
ATATC Run BLAST on NCBI transcript from alignment at sc0004089:6769..8118- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043281 ID=TCONS_00043281|Name=TCONS_00043281|organism=Clytia hemisphaerica|type=transcript|length=1350bp|location=Sequence derived from alignment at sc0004089:6769..8118- (Clytia hemisphaerica)
GAATGGTGAATTCTCAAAATTAGTTTTTGAAGTCTGAATGGTTTCCAATT
TTAATTTCATAAAATCTGTTGTGCTGATATGATATCTTTTGTGTCTTAAA
AGAAATAAAGCTGCAATTTATTACTATACATTTATAAAAATCAAAATTAT
CTTAAAATGACATTTCTTGAAAATTATTTATTTACTCATTATTCACCATT
GCTGCAACTTTTTTTATAATTATTACATACATAACTTCCAAGCTCAACAC
ACTGAACTAAAGCTCTTGTTTAGATCTGCAACATGTTATTTACATGTTTT
AAAAGAAAAACTGTTGTTACTAGTATAATGATGTTAGTATTTACAGCTCT
TAAACATTGATTAAGTAGGTTTTAGACCTTAAAATTTGTTACACTTTTGT
AAAATATCACCACATAAACGCTAATCTTTTATCTTAAATTTTGATAGGAA
AATATTTTTGTGAAATTATAATTTTTTGTAAAAGAGATATTATATACCTT
TTCTGTTTTTTTTTGCTGATCTCCGTTTGCATCCTGCAGCTATCTATCTT
GAAACCCATGACACAATCTTGTATCTAGCTTAAAAATTTAGCTTGAATTT
TACACGTATTTTGACAAAAAAAATTCTCTTTTTTTATTTACCGTAAAAAA
ATAAGAACGCAATATCACAAAATGATGAACAATGCTTTACAAACATACAA
TGGGGAACTATCTCTCATCACCAGACCAATGCCAAAAGTGACGTCACCAA
ATGATGTTTTGATTAAAGTGACCCATGCTGGGGTTTGTGGAACTGATTTA
TCCATCATTGCTGGTCGATTTGAAGCAGCAAAGAAAATTATACAAGGTCA
TGAGTTCTCTGGTGTTGTCTCTGATATTGGTGCAAAAGTCAAACATCTAA
AGATTGGTGATAGGTAACCTTTAAAAATTCTTACACTTTTTTATAAGAAC
AAACAAAAGAAGGCCTCGATGGCCAAAATACCAAGAATTAGATTAAGAAC
GTTAAGGTTTTGCAGATTGCAGTCTTTTAAACACTCAGTTTCTTAGGAAA
TTATGCTAAAATACTTGCAAGATTTAAAAACATCCATAGGCTTAAAAATT
TTTGGATTTCTTTATAAAAAATTGTGTACTGTTGCTTTGGATCTTAGCTA
GTTATTGACCAAAGGCTTGACCCAAAGCTTATTCACCATTTTTCCCCAAA
AGTTTTTGATAAATATTTCCTTTGTTAAAGCAGTCTATAAACAGTGATAG
TTTGCAAATTGTATTATTTTATTGTATTTTTAAGAAAATACCATGATCTT
GATTTCAGAAATGCAAGCAGGGGGAACTATAGGAAAGGAACAAGGATATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043281-exon-sc0004089-1575043694:7206..8118 | TCONS_00043281-exon-sc0004089-1575043694:7206..8118 | Clytia hemisphaerica | exon |
| TCONS_00043281-exon-sc0004089-1575043694:6769..6810 | TCONS_00043281-exon-sc0004089-1575043694:6769..6810 | Clytia hemisphaerica | exon |
| TCONS_00043281-exon-sc0004089-1510915933:7206..8118 | TCONS_00043281-exon-sc0004089-1510915933:7206..8118 | Clytia hemisphaerica | exon |
| TCONS_00043281-exon-sc0004089-1510915933:6769..6810 | TCONS_00043281-exon-sc0004089-1510915933:6769..6810 | Clytia hemisphaerica | exon |
| TCONS_00043281-exon-sc0004089-1491911889:7206..8118 | TCONS_00043281-exon-sc0004089-1491911889:7206..8118 | Clytia hemisphaerica | exon |
| TCONS_00043281-exon-sc0004089-1491911889:6769..6810 | TCONS_00043281-exon-sc0004089-1491911889:6769..6810 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004089 | supercontig | sc0004089:6769..8118 - |
Blast
The following BLAST results are available for this feature:
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