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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042573 ID=TCONS_00042573|Name=TCONS_00042573|organism=Clytia hemisphaerica|type=transcript|length=2197bp TTTTATTAAATTCtagattttattatatttagatagattttattttatta ccattttattttacattcaggAAATTGTACGTATGTACCCTCTGAATTAt cgaatagaaatagaaatagaaatgtcATGCATGAAACTCTGATATCGGCC GGATATCTAATTAAATTTATCTCTATTCTTGACCAATATACCGCTCtgcc aatagacctttttttaaagaggcagccatgttgaataattatgtactcca gcataaaaacaatgatacagccatgcataatttttaaaatatgcatgacc atgatacagtaattatgcatggctgtatcattgtttttatgctggagtac ataattattcaacatggctgcctctttaaaaaaaggtctatatggTACAG AGCAAAGTGAATTGCAAGTCAGATTTGCAACTATGTGCGTGTTTTTCAAA GTTATTGTTGTGTTTCATTCAAGGTTTCATCATTTTCTCAGTTTGCTTAG TGAGTTTCACTCTCTTTGTACGGAATTGTGATTTTTCACTCTTTTTCAAT CTGTGATAACTTTTCTTTCATAAATgattttgatataattttttcttaCA TGGAAAGATGAAAGACTGAATAAAGATACCTGAAAAAATAATCATGAAAg ctactGTGGAGAAGAGGAATCTGTCGCAGAAAGCAAACatgtgaaaaata atttcattcaAAGATGACAGATTTGTTGTATATCTCAAACctagaaaatt caaaatcaagaGGTACCATCTCAATCAACACCATCAATGGACTTCAGTCC TTTGCCAATTTACCAATACCTACTCCCAACAAAAAGTTATACAGTTCCGG AGCCTATTATGTCGGTAATTTGCTTGGTAACCAGCGCAGTGGATGGGGGA AGCTACATTGGTCGTTCGGGTGTGAACATGAAGGCTACtataacaacaat aaaagagatgGCAGAGGCACCTTGGCGTGGAAAGATGGTTCCGTTTACAA GGGTGACTTCAAAGATGATTTGAGACATGGTTATGGtgaaatttcatggc caaatgGAGAGTCCTACCTTGGGATGTTTGATACCGATATGAAACATGGT CACGGGACCTACATTTGGCCGGAGATTGGAAAATACGAAGGGAACTTTGA GGAAGATCAAAAGCATGGATTTGGCGTCTTTACAATGAACAATGGTGATA AATTTGAAGGTATTTATTTGAATGGGCAACGATGGGGTCCTGGTATATTC ACTTATCACAAAGATGGGAGTCAGGATGTTGGTATATGGAAAGGAAGTCA ATTGTTGAGAATCTGCTCTGTAATGGATGATGCTTGTTTGTTTGATCATC TTGTTCATCACAAAATCAATTCAGGAGGTCAAGTTTGTGATGAGATTAGA GTGTCTACAGCATCGAAATCTAGAAAACGATATGTTCCAGAAAGATTCTT ACAGAACCATGCTATACCAACTGGAAATGAGGATTTCATCATGCCTGCTA CCTTCCCCTATAAGGATATCATTGAAGGAATTCGTAATAGCAAAACGAGC AAAGGTTATATCGAGACTTCATCAGAAGCCATCTTGAATGCCTCAAAGAA CGGTCACTACGACGACGTGAAAAACATTCTAGAGGAAGGGCTGGTCAACC CAGATGTTTCCGATAAAACAGGATTTTCTGCCATCATGGCGGCCGCTGTG AATTGTCATACAGATGTCATCAATATTTTGTTAGACCATGGTGGAAACAT CAACCAGCTGACAGAGGAAGGTTTATCAGTCCTCTTGGCATGCCACATCC TCCTTTACACCAAGGAGAATTTCGTTGACAACATTGCAGAGAGCATTGCC AAAGAGAATCTCTTCAATTCAGTAGAAGTAGACAAGAAAACGGGATCGGT GAACAACCGTAATGAACGCAAATTGATCATGGCCATCTTTGAAGATATAC ATCGCCCCTTCAATGGGTTACGCAAAGCTAAGATCGCAACGGCAGTAGTG AAAGGTAAAGGGAAGAGAGACTCGAGAGCTCCTTCGCCTTCTGCAGAGAA TATGCTGGAAGATCTGGTGGAAGAAAACGAGAAGACATTTGACCAatgga aaatgaacttttatCAAAACTCCATGGACCGTGTCAAAGAGGTTGAGGAG ATCAACCAGTCGTTCAAACACATCATGTTAAAAGATCCACATCGTTA Run BLAST on NCBI protein sequence of TCONS_00042573-protein >TCONS_00042573-protein ID=TCONS_00042573-protein|Name=TCONS_00042573-protein|organism=Clytia hemisphaerica|type=polypeptide|length=494bp
MTDLLYISNLENSKSRGTISINTINGLQSFANLPIPTPNKKLYSSGAYYV GNLLGNQRSGWGKLHWSFGCEHEGYYNNNKRDGRGTLAWKDGSVYKGDFK DDLRHGYGEISWPNGESYLGMFDTDMKHGHGTYIWPEIGKYEGNFEEDQK HGFGVFTMNNGDKFEGIYLNGQRWGPGIFTYHKDGSQDVGIWKGSQLLRI CSVMDDACLFDHLVHHKINSGGQVCDEIRVSTASKSRKRYVPERFLQNHA IPTGNEDFIMPATFPYKDIIEGIRNSKTSKGYIETSSEAILNASKNGHYD DVKNILEEGLVNPDVSDKTGFSAIMAAAVNCHTDVINILLDHGGNINQLT EEGLSVLLACHILLYTKENFVDNIAESIAKENLFNSVEVDKKTGSVNNRN ERKLIMAIFEDIHRPFNGLRKAKIATAVVKGKGKRDSRAPSPSAENMLED LVEENEKTFDQWKMNFYQNSMDRVKEVEEINQSFKHIMLKDPHR Run BLAST on NCBI transcript from alignment at sc0003502:3510..11300+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042573 ID=TCONS_00042573|Name=TCONS_00042573|organism=Clytia hemisphaerica|type=transcript|length=7791bp|location=Sequence derived from alignment at sc0003502:3510..11300+ (Clytia hemisphaerica) TTTTATTAAATTCtagattttattatatttagatagattttattttatta
ccattttattttacattcaggAAATTGTACGTATGTACCCTCTGAATTAt
cgaatagaaatagaaatagaaatgtcATGCATGAAACTCTGATATCGGCC
GGATATCTAATTAAATTTATCTCTATTCTTGACCAATATACCGCTCtgcc
aatagacctttttttaaagaggcagccatgttgaataattatgtactcca
gcataaaaacaatgatacagccatgcataatttttaaaatatgcatgacc
atgatacagtaattatgcatggctgtatcattgtttttatgctggagtac
ataattattcaacatggctgcctctttaaaaaaaggtctatatggTACAG
AGCAAAGTGAATTGCAAGTCAGATTTGCAACTATGTGCGTGTTTTTCAAA
GTTATTGTTGTGTTTCATTCAAGGTTTCATCATTTTCTCAGTTTGCTTAG
TGAGTTTCACTCTCTTTGTACGGAATTGTGATTTTTCACTCTTTTTCAAT
CTGTGATAACTTTTCTTTCATAAATgattttgatataattttttcttaCA
TGGAAAGATGAAAGACTGAATAAAGATACCTGAAAAAATAATCATGAAAg
ctactgtaagttggtctaatatcaacatcTCTCGtcttgaattgaattga
ataataTATTTACTACCAGGTTAGGTAGAGGGATCACCCCTAATAGAAAc
ttaattctaataaaaaatacagGGGTTGACCTAAATGtttaaagaaataa
aagaataatcACAAAATAGTAAATATTCAAGAAGCTAAAATAAGTAAAAT
ACTATATGACAACGGTtcgtatgtacatttaaaaacaGCTTTTTATTAGC
TGcaaggttaaaaatattcataaGTTTTTCCATTCCTTATCCATTATTTT
CATGAGATTTGTTAGGTAACGTATTTGCTTAGGTAGAAGTTTTGGGTCAG
AGTTTTTAGCTTTGCAAGATCTAAATCAGAGATTTTTTCGTcagtaaatt
ttctttgaagCTCATTCCATTGATTTGAAGAAATTCTAGTAAAAGAGTGT
AATCTAAAATTTGTAGTGTTAACATTGGGGCGGAAAATAAGATCAATGAA
CTGGTCTTTGGTTTCAATCTTGTGAggatctttttcaaaaacaagagTTT
GAAGGGATTCAGCGGGAAGGTTGTTGTTGAAATATTTGTGAATATACTTG
ATGTTCATTACTTTGACTTGGTCAAAGACATTGAGTAATTCTAGATTTGC
TAAAAGGGGAGTGGCAGAGACTCGTGGACCATTGAAAGTCATGATCCTGA
TTGCAGTATTTTGGAGAGTTTGAATTGatgtctaattccgacacccttct
ttagagacaggattaatatgaaagcttgaatcactgattgaaaaaggatt
attcctctctgaccactaagcaaagaaaaatagttttgacctttctatca
atttcagctgataaaaatggtgttggaattagatgagggatgtcgacatt
agaccaaattACGGTAAATTTATAGAGGAAAAATGGACTAAAGAAAAGTT
TCAATACACAATTTCACAAAACCTTGCCTTAAAGAAACTGAGTTATTCAT
TTggtaaaaaagttattaaaaaataaatgcaatacAATAATTTTGTGGAC
CTGGTGATAAGTACAGTAATGGATATTATATTTCTTGTTAAATAGTAAAA
AACTCCAGCCAGTATATATATAGttctaactcttcatacaaaacttatgg
gaaacacatatttggactttgttaaTGCTGTAGGCAAATCATTGCACTCA
cacaggaaatttcaaaaactttcaaaattgacctcaggaaatttatcccg
aatttccctcatagccatgagattactagtacaaatttcACCTATTTGTC
AGCTTTGGTTTGATAGTACATTTATTgaactctttttcaaaattggaata
ttttttgaagttttttaatttAACTTGAAGTCGATAAGATAAGCTGGATT
CAAGgaatatttctttcattttcttttttgtaatttttacatGGATTAAC
TATcacagaattatttttttgcaacttttgttcaagatttttatttgaaa
ttttaagataatttttgCCTATACCCCTTGGAACATGAAAAGGTTTCACA
ACATCATAGATTACTCAGTAATTACTGGGTTCTGAATAGAGATCCGTTAC
AGACCTGTCTGAAAAGTACCAGATAACTGATGAGATTTGAAACTGTTTCT
CACTAGTCACAATCTATTGCCAAATTGACCTAATCCAGTGCTGTCCGATT
TTAGCTGTTCTGTGCTTTAGatgttctgtaaaatatcaatAACACTGGTG
GTTGCAATATCACATTTTGCAATCAAGATATTTCTATCAGTTTAATCAAA
TAGCTGATGTGATAAGCCTCCTGCCACTCACtactttgttttctctttta
taTAGGTGGAGAAGAGGAATCTGTCGCAGAAAGCAAACatgtgaaaaata
atttcattcaAAGATGACAGATTTGTTGTATATCTCAAACctagaaaatt
caaaatcaagaGGTACCATCTCAATCAACACCATCAATGGACTTCAGTCC
TTTGCCAATTTACCAATACCTACTCCCAACAAAAAGTTATACAGTTCCGG
AGCCTATTATGTCGGTAATTTGCTTGGTAACCAGCGCAGTGGATGGGGGA
AGCTACATTGGTCGTTCGGGTGTGAACATGAAGGCTACtataacaacaat
aaaagagatgGCAGAGGCACCTTGGCGTGGAAAGATGGTTCCGTTTACAA
GGGTGACTTCAAAGATGATTTGAGACATGGTTATGGtgaaatttcatggc
caaatgGAGAGGTTAGTTCATATTTACAACACCTATGAAACTAACTATAG
TTCTATCGAGTAAATTATTAGAATGTCAATtggtcattccattttatatc
catacaggggggtggacgagcatttccagagggtaatccgagaaaaaATT
CTAGGGGgtcttctttcatttttccaagggggtaaaaagttattctaaaa
tttccacagggtaaaagactgattttcgTCCAGCCTCACtttaaagtata
aaaagaatttttccaagggtgcctttgcaaattttgccattttctagGGG
GTAtcgacacattttcaataaattttttttgacttgaaatggTTTGTCCA
CCCCCTacgtatggttttttaatggaacagctcAATGTGTTTGTACTACA
GAAGATGCAAATTGATGATAAGATCGTTCACGTTTTTGTTTGGTTGTTGT
AATAGCAATATATCTAATATAGAAGAATTTTTTCATTCTCAAACATTTAG
AAAACCGTTtctctaaatgaaaaaatctttctacTTTAGTCCTACCTTGG
GATGTTTGATACCGATATGAAACATGGTCACGGGACCTACATTTGGCCGG
AGATTGGAAAATACGAAGGGAACTTTGAGGAAGATCAAAAGCATGGATTT
GGCGTCTTTACAATGAACAATGGTGATAAATTTGAAGGTATTTATTTGAA
TGGGCAACGATGGGGTCCTGGTATATTCACTTATCACAAAGATGGGAGTC
AGGATGTTGGTATATGGAAAGGAAGTCAATTGTTGAGAATCTGCTCTGTA
ATGGATGATGCTTGTTTGTTTGATCATCTTGTTCATCACAAAATCAATTC
AGGAGGTCAAGTTTGTGATGAGATTAGAGTGTCTACAGCATCGAAATCTA
GAAAACGATATGTTCCAGAAAGATTCTTACAGAACCATGCTATACCAACT
GGAAATGAGGATTTCATCATGCCTGCTACCTTCCCCTATAAGGATATCAT
TGAAGGTGAGtttctaatgttttttaaaCTACAACCTATCTTTTACTGAA
AAAGTGGTAGAAAAGTCTAGATACAGAGTCGAATCATATCAATCACTGTA
AGACATCATTTTGCTGTCATCGAAACTTTATACAGTTTGTGAGGACAagg
gttttttcaaaaaagtttgtcttaatcagtgttgcaacttttccgTCTGT
AGACGGATATCCGTCCAGTTGAGATAAAAATATATCATTTCCATCTTGCC
AGTAAGAGGGTTTTTGTTCAAATGACCATCTAATCCTAAGGTTTCCGTCC
ATATTCACAAGACCTAGTTGCAACACTGCTTAATGATCCAAAAGTTAACT
GATGTTTCATAAACTTTAGGTCTCAAATAACTAATATTAAGGATGATTTG
GAAAGGTTTTTTAATGAGATGATGAAAATTTACCCACAATCGTCTTGAAA
CAGAACCGATAATTCCCACtgtgaagaaaagaagaaaaatctcaTTTACA
TTACTCATTCGTTTTAACATGCTAAtgttaaaataattatttttccaaaa
gtcATTATTTTAGGACTGTACTCATActatgaaaagaaataattcctACC
AAGTTATTTAATGAATTTGCACGAatttgaaaacttgttttttatacATG
ATATCTTCTTATACTCCTCCCTTTCCCTCCTTAAATTTGCAGTATTTCTT
AACTTGTGAACTGTTGGACAATTATCCGTTATTATAGGAAAATATTGGCT
TGACTGTTTTTTGTGTTCTTTTTCAAGATGACCCTCAAATTTCTAGGCTA
GAATCTGCTAGAATATCTTCACTTTTGATGCcttcaaaaaaaggaaatgA
TTAAGATTACCTACCCAGAAAtaaagaaaagacacttttttattctgcta
ctggcagaATCAGtgtcttttctttctgactgaCATCGCTCTACTTATGT
AAAAGACTGAAGAATTACTTACCTACCCAGAAATAGAAATCAATCGATCG
AAAACAAGTCAGTTAAATAGGAAAAACGTTTTCAAAATTATGTTGTTCCC
GAATCAGCTATTGTGTATTTTGATCACtggaaattgtttttaaaaagttc
atcattGCCCATAGATCCTGTGATTAAAACTACGGCCGGTTAGATACCGA
CCAAAACACGAGGCTGCTAATTTTATATTCGACATTGTTATTATCAAACG
AACAACCAAAAGAAAACGAATTTCGATCACTCAATCACATACATCCCACT
CTTACAAAAGTTTTCTTCCTTACTCTATTCTTTCTAATATTTTGATAGGA
AAAAGTTAGGCCGGTTATCTGCTAAAGCCGACTAGATATAGAAAATATCG
ACAACAAGCCAAATGTCTCAAAAAGTTTTTGCGCCTTAGGTCAACTTTGA
AATGAgttaaaaatgtatcaaataaAGAACCAAAAGATTCGATCACTTCT
ACACttcactttcaaaatattttgcactcactgacctttatatacagttg
acgttctctaatttgacgttctactattcgataggctcccttattcgatg
aaacttaaagtccctgtcaacaagaaattctcataaacgacgttccctaa
ttcgataagctcccttatttgacgaaaatccaattccccttgaagatcga
attagagagcgtcaactgtaaatctttttttgctccttgtttataaaggt
cagtgattgcACTGCTCTTttgctctattttttttttcattattttgata
gGAATTCGTAATAGCAAAACGAGCAAAGGTTATATCGAGACTTCATCAGA
AGCCATCTTGAATGCCTCAAAGAACGGTCACTACGACGACGTGAAAAACA
TTCTAGAGGAAGGGCTGGTCAACCCAGATGTTTCCGATAAAACAGGATTT
TCTGCCATCATGGCGGCCGCTGTAAGtctttcatttgtttttgtCCTTTG
GTTAATCGGGGACATGATATATGTGCTCCCGTACCACGTTTTTTCTGAAC
TTAATAAAACCACTTATCGCCTTTGGTGTACTGGAACATATATGTAGCGC
TTGATAGCACTCGGCATTGATTATTTGACCAAAAACTActgttaaaatat
aaaaatttaagtTATAATCGATTGTGAATTAGACAGTGTTCTTGATAAGC
AATATATCTTTATATAACAACTAACATTTGACACCTTTCTGCTGAAAAAA
ATTGTGGTGTTTTATGTTTCTTTGTTTGTAAGATTCCTTTAGCGAATTTT
AACTTATGATAATCCATACTTGCATCTCGTCACGTTACCAGGTGAATTGT
CATACAGATGTCATCAATATTTTGTTAGACCATGGTGGAAACATCAACCA
GCTGACAGAGGAAGGTTTATCAGTCCTCTTGGCATGCCACATCCTCCTTT
ACACCAAGGAGAATTTCGTTGACAACATTGCAGAGAGCATTGCCAAAGAG
AATCTCTTCAATTCAGTAGAAGTAGACAAGAAAACGGGATCGGTGAACAA
CCGTAATGAACGCAAATTGATCATGGCCATCTTTGAAGATATACATCGCC
CCTTCAATGGGTTACGCAAAGCTAAGGTAGAAGCATTTATTCATTTTGAG
AATAGTCTATGGGTTTGCTGCAAATAAATCACTTTCTATAAACGATTGTG
TATATTATTACACGCATTTGTGTTTTTCAACAGATCGCAACTCAACTaaa
gttttccctattttcgctaaaataaatctggctaaaacacgccgaatcga
cagatcgctaaaatttatctgcACGAAATTTCTGTTTATATTggcttgat
acatttttatcaataggaagggtttcagtgcaaagaaatgctagaaaacg
agttcagtcaataatgtaatacgagtattcacTAAAATTTATCTGCACGA
AATTTCTGTTTATATTggcttgatacatttttatcaataggaaggggttc
agtgcaaagaaatgctagaaaacgagttcagtcaataatgtaatacgagt
attcgctaaaatttatccacgcgaaattttttgaaatcgtgatttgctaa
aataaatccaaaaacaatcaagattttcctgactcgctaatacgctaaaa
ttagtctcgctaaaatttctacgattaaagtatgacATTGTTTGCAGTTG
CTTAGTGGACGGAAACTAACGTGAATGAATAAGTAATTCAACAAATTTAT
TCTTACATTTCCATAGATCGCAACGGCAGTAGTGAAAGGTAAAGGGAAGA
GAGACTCGAGAGCTCCTTCGCCTTCTGCAGAGAATATGCTGGAAGATCTG
GTGGAAGAAAACGAGAAGACATTTGACCAatggaaaatgaacttttatCA
AAACTCCATGGACCGTGTCAAAGAGGTGAGCTCTTAATATAAGTGATCTA
ATTCCCTTTGTTGATAACAATAGCTGCAGTGTGTGTTCTTTAGATTCAGA
TGAGTAACCCCAAACCCCAAATATTATAATGTTAATCTTTTCCTTCATAG
GTCTAGATTAGCTAAATAATTTTTACATCTTTCATCCAATTTTTGAGAGG
ATTATAGATGTAACATCACAGGAGGGTCTGTATAATTACTCCAAATGTGG
CAGCAGCAACCTTAAAATTGTCCTCTGCAATGTCTTTTTTTTGTCGGCGA
GAAAAACTCTTTATTTTAAAACCAGAACTGACTATTCTTTTTGGAATCCT
TAATCTTTTACAAACTTGGTTTAAGGTTGAGGAGATCAACCAGTCGTTCA
NTGTCGGCGAGAAAAACTCTTTATTTTAAAACCAGAACTGACTATTCTTT
TTGGAATCCTTAATCTTTTACAAACTTGGTTTAAGGTTGAGGAGATCAAC
CAGTCGTTCAAACACATCATGTTAAAAGATCCACATCGTTA Coding sequence (CDS) from alignment at sc0003502:3510..11300+ >TCONS_00042573 ID=TCONS_00042573|Name=TCONS_00042573|organism=Clytia hemisphaerica|type=CDS|length=8892bp|location=Sequence derived from alignment at sc0003502:3510..11300+ (Clytia hemisphaerica) ATGACAGATTTGTTGTATATCTCAAACctagaaaattcaaaatcaagaGG TACCATCTCAATCAACACCATCAATGGACTTCAGTCCTTTGCCAATTTAC CAATACCTACTCCCAACAAAAAGTTATACAGTTCCGGAGCCTATTATGTC GGTAATTTGCTTGGTAACCAGCGCAGTGGATGGGGGAAGCTACATTGGTC GTTCGGGTGTGAACATGAAGGCTACtataacaacaataaaagagatgGCA GAGGCACCTTGGCGTGGAAAGATGGTTCCGTTTACAAGGGTGACTTCAAA GATGATTTGAGACATGGTTATGGtgaaatttcatggccaaatgGAGAGTC CTACCTTGGGATGTTTGATACCGATATGAAACATGGTCACGGGACCTACA TTTGGCCGGAGATTGGAAAATACGAAGGGAACTTTGAGGAAGATCAAAAG CATGGATTTGGCGTCTTTACAATGAACAATGGTGATAAATTTGAAGGTAT TTATTTGAATGGGCAACGATGGGGTCCTGGTATATTCACTTATCACAAAG ATGGGAGTCAGGATGTTGGTATATGGAAAGGAAGTCAATTGTTGAGAATC TGCTCTGTAATGGATGATGCTTGTTTGTTTGATCATCTTGTTCATCACAA AATCAATTCAGGAGGTCAAGTTTGTGATGAGATTAGAGTGTCTACAGCAT CGAAATCTAGAAAACGATATGTTCCAGAAAGATTCTTACAGAACCATGCT ATACCAACTGGAAATGAGGATTTCATCATGCCTGCTACCTTCCCCTATAA GGATATCATTGAAGGAATTCGTAATAGCAAAACGAGCAAAGGTTATATCG AGACTTCATCAGAAGCCATCTTGAATGCCTCAAAGAACGGTCACTACGAC GACGTGAAAAACATTCTAGAGGAAGGGCTGGTCAACCCAGATGTTTCCGA TAAAACAGGATTTTCTGCCATCATGGCGGCCGCTGTGAATTGTCATACAG ATGTCATCAATATTTTGTTAGACCATGGTGGAAACATCAACCAGCTGACA GAGGAAGGTTTATCAGTCCTCTTGGCATGCCACATCCTCCTTTACACCAA GGAGAATTTCGTTGACAACATTGCAGAGAGCATTGCCAAAGAGAATCTCT TCAATTCAGTAGAAGTAGACAAGAAAACGGGATCGGTGAACAACCGTAAT GAACGCAAATTGATCATGGCCATCTTTGAAGATATACATCGCCCCTTCAA TGGGTTACGCAAAGCTAAGATCGCAACGGCAGTAGTGAAAGGTAAAGGGA AGAGAGACTCGAGAGCTCCTTCGCCTTCTGCAGAGAATATGCTGGAAGAT CTGGTGGAAGAAAACGAGAAGACATTTGACCAatggaaaatgaactttta tCAAAACTCCATGGACCGTGTCAAAGAGGTTGAGGAGATCAACCAGTCGT TCAAACACATCATGTTAAAAGATCCACATCGTATGACAGATTTGTTGTAT ATCTCAAACctagaaaattcaaaatcaagaGGTACCATCTCAATCAACAC CATCAATGGACTTCAGTCCTTTGCCAATTTACCAATACCTACTCCCAACA AAAAGTTATACAGTTCCGGAGCCTATTATGTCGGTAATTTGCTTGGTAAC CAGCGCAGTGGATGGGGGAAGCTACATTGGTCGTTCGGGTGTGAACATGA AGGCTACtataacaacaataaaagagatgGCAGAGGCACCTTGGCGTGGA AAGATGGTTCCGTTTACAAGGGTGACTTCAAAGATGATTTGAGACATGGT TATGGtgaaatttcatggccaaatgGAGAGTCCTACCTTGGGATGTTTGA TACCGATATGAAACATGGTCACGGGACCTACATTTGGCCGGAGATTGGAA AATACGAAGGGAACTTTGAGGAAGATCAAAAGCATGGATTTGGCGTCTTT ACAATGAACAATGGTGATAAATTTGAAGGTATTTATTTGAATGGGCAACG ATGGGGTCCTGGTATATTCACTTATCACAAAGATGGGAGTCAGGATGTTG GTATATGGAAAGGAAGTCAATTGTTGAGAATCTGCTCTGTAATGGATGAT GCTTGTTTGTTTGATCATCTTGTTCATCACAAAATCAATTCAGGAGGTCA AGTTTGTGATGAGATTAGAGTGTCTACAGCATCGAAATCTAGAAAACGAT ATGTTCCAGAAAGATTCTTACAGAACCATGCTATACCAACTGGAAATGAG GATTTCATCATGCCTGCTACCTTCCCCTATAAGGATATCATTGAAGGAAT TCGTAATAGCAAAACGAGCAAAGGTTATATCGAGACTTCATCAGAAGCCA TCTTGAATGCCTCAAAGAACGGTCACTACGACGACGTGAAAAACATTCTA GAGGAAGGGCTGGTCAACCCAGATGTTTCCGATAAAACAGGATTTTCTGC CATCATGGCGGCCGCTGTGAATTGTCATACAGATGTCATCAATATTTTGT TAGACCATGGTGGAAACATCAACCAGCTGACAGAGGAAGGTTTATCAGTC CTCTTGGCATGCCACATCCTCCTTTACACCAAGGAGAATTTCGTTGACAA CATTGCAGAGAGCATTGCCAAAGAGAATCTCTTCAATTCAGTAGAAGTAG ACAAGAAAACGGGATCGGTGAACAACCGTAATGAACGCAAATTGATCATG GCCATCTTTGAAGATATACATCGCCCCTTCAATGGGTTACGCAAAGCTAA GATCGCAACGGCAGTAGTGAAAGGTAAAGGGAAGAGAGACTCGAGAGCTC CTTCGCCTTCTGCAGAGAATATGCTGGAAGATCTGGTGGAAGAAAACGAG AAGACATTTGACCAatggaaaatgaacttttatCAAAACTCCATGGACCG TGTCAAAGAGGTTGAGGAGATCAACCAGTCGTTCAAACACATCATGTTAA AAGATCCACATCGTATGACAGATTTGTTGTATATCTCAAACctagaaaat tcaaaatcaagaGGTACCATCTCAATCAACACCATCAATGGACTTCAGTC CTTTGCCAATTTACCAATACCTACTCCCAACAAAAAGTTATACAGTTCCG GAGCCTATTATGTCGGTAATTTGCTTGGTAACCAGCGCAGTGGATGGGGG AAGCTACATTGGTCGTTCGGGTGTGAACATGAAGGCTACtataacaacaa taaaagagatgGCAGAGGCACCTTGGCGTGGAAAGATGGTTCCGTTTACA AGGGTGACTTCAAAGATGATTTGAGACATGGTTATGGtgaaatttcatgg ccaaatgGAGAGTCCTACCTTGGGATGTTTGATACCGATATGAAACATGG TCACGGGACCTACATTTGGCCGGAGATTGGAAAATACGAAGGGAACTTTG AGGAAGATCAAAAGCATGGATTTGGCGTCTTTACAATGAACAATGGTGAT AAATTTGAAGGTATTTATTTGAATGGGCAACGATGGGGTCCTGGTATATT CACTTATCACAAAGATGGGAGTCAGGATGTTGGTATATGGAAAGGAAGTC AATTGTTGAGAATCTGCTCTGTAATGGATGATGCTTGTTTGTTTGATCAT CTTGTTCATCACAAAATCAATTCAGGAGGTCAAGTTTGTGATGAGATTAG AGTGTCTACAGCATCGAAATCTAGAAAACGATATGTTCCAGAAAGATTCT TACAGAACCATGCTATACCAACTGGAAATGAGGATTTCATCATGCCTGCT ACCTTCCCCTATAAGGATATCATTGAAGGAATTCGTAATAGCAAAACGAG CAAAGGTTATATCGAGACTTCATCAGAAGCCATCTTGAATGCCTCAAAGA ACGGTCACTACGACGACGTGAAAAACATTCTAGAGGAAGGGCTGGTCAAC CCAGATGTTTCCGATAAAACAGGATTTTCTGCCATCATGGCGGCCGCTGT GAATTGTCATACAGATGTCATCAATATTTTGTTAGACCATGGTGGAAACA TCAACCAGCTGACAGAGGAAGGTTTATCAGTCCTCTTGGCATGCCACATC CTCCTTTACACCAAGGAGAATTTCGTTGACAACATTGCAGAGAGCATTGC CAAAGAGAATCTCTTCAATTCAGTAGAAGTAGACAAGAAAACGGGATCGG TGAACAACCGTAATGAACGCAAATTGATCATGGCCATCTTTGAAGATATA CATCGCCCCTTCAATGGGTTACGCAAAGCTAAGATCGCAACGGCAGTAGT GAAAGGTAAAGGGAAGAGAGACTCGAGAGCTCCTTCGCCTTCTGCAGAGA ATATGCTGGAAGATCTGGTGGAAGAAAACGAGAAGACATTTGACCAatgg aaaatgaacttttatCAAAACTCCATGGACCGTGTCAAAGAGGTTGAGGA GATCAACCAGTCGTTCAAACACATCATGTTAAAAGATCCACATCGTATGA CAGATTTGTTGTATATCTCAAACctagaaaattcaaaatcaagaGGTACC ATCTCAATCAACACCATCAATGGACTTCAGTCCTTTGCCAATTTACCAAT ACCTACTCCCAACAAAAAGTTATACAGTTCCGGAGCCTATTATGTCGGTA ATTTGCTTGGTAACCAGCGCAGTGGATGGGGGAAGCTACATTGGTCGTTC GGGTGTGAACATGAAGGCTACtataacaacaataaaagagatgGCAGAGG CACCTTGGCGTGGAAAGATGGTTCCGTTTACAAGGGTGACTTCAAAGATG ATTTGAGACATGGTTATGGtgaaatttcatggccaaatgGAGAGTCCTAC CTTGGGATGTTTGATACCGATATGAAACATGGTCACGGGACCTACATTTG GCCGGAGATTGGAAAATACGAAGGGAACTTTGAGGAAGATCAAAAGCATG GATTTGGCGTCTTTACAATGAACAATGGTGATAAATTTGAAGGTATTTAT TTGAATGGGCAACGATGGGGTCCTGGTATATTCACTTATCACAAAGATGG GAGTCAGGATGTTGGTATATGGAAAGGAAGTCAATTGTTGAGAATCTGCT CTGTAATGGATGATGCTTGTTTGTTTGATCATCTTGTTCATCACAAAATC AATTCAGGAGGTCAAGTTTGTGATGAGATTAGAGTGTCTACAGCATCGAA ATCTAGAAAACGATATGTTCCAGAAAGATTCTTACAGAACCATGCTATAC CAACTGGAAATGAGGATTTCATCATGCCTGCTACCTTCCCCTATAAGGAT ATCATTGAAGGAATTCGTAATAGCAAAACGAGCAAAGGTTATATCGAGAC TTCATCAGAAGCCATCTTGAATGCCTCAAAGAACGGTCACTACGACGACG TGAAAAACATTCTAGAGGAAGGGCTGGTCAACCCAGATGTTTCCGATAAA ACAGGATTTTCTGCCATCATGGCGGCCGCTGTGAATTGTCATACAGATGT CATCAATATTTTGTTAGACCATGGTGGAAACATCAACCAGCTGACAGAGG AAGGTTTATCAGTCCTCTTGGCATGCCACATCCTCCTTTACACCAAGGAG AATTTCGTTGACAACATTGCAGAGAGCATTGCCAAAGAGAATCTCTTCAA TTCAGTAGAAGTAGACAAGAAAACGGGATCGGTGAACAACCGTAATGAAC GCAAATTGATCATGGCCATCTTTGAAGATATACATCGCCCCTTCAATGGG TTACGCAAAGCTAAGATCGCAACGGCAGTAGTGAAAGGTAAAGGGAAGAG AGACTCGAGAGCTCCTTCGCCTTCTGCAGAGAATATGCTGGAAGATCTGG TGGAAGAAAACGAGAAGACATTTGACCAatggaaaatgaacttttatCAA AACTCCATGGACCGTGTCAAAGAGGTTGAGGAGATCAACCAGTCGTTCAA ACACATCATGTTAAAAGATCCACATCGTATGACAGATTTGTTGTATATCT CAAACctagaaaattcaaaatcaagaGGTACCATCTCAATCAACACCATC AATGGACTTCAGTCCTTTGCCAATTTACCAATACCTACTCCCAACAAAAA GTTATACAGTTCCGGAGCCTATTATGTCGGTAATTTGCTTGGTAACCAGC GCAGTGGATGGGGGAAGCTACATTGGTCGTTCGGGTGTGAACATGAAGGC TACtataacaacaataaaagagatgGCAGAGGCACCTTGGCGTGGAAAGA TGGTTCCGTTTACAAGGGTGACTTCAAAGATGATTTGAGACATGGTTATG GtgaaatttcatggccaaatgGAGAGTCCTACCTTGGGATGTTTGATACC GATATGAAACATGGTCACGGGACCTACATTTGGCCGGAGATTGGAAAATA CGAAGGGAACTTTGAGGAAGATCAAAAGCATGGATTTGGCGTCTTTACAA TGAACAATGGTGATAAATTTGAAGGTATTTATTTGAATGGGCAACGATGG GGTCCTGGTATATTCACTTATCACAAAGATGGGAGTCAGGATGTTGGTAT ATGGAAAGGAAGTCAATTGTTGAGAATCTGCTCTGTAATGGATGATGCTT GTTTGTTTGATCATCTTGTTCATCACAAAATCAATTCAGGAGGTCAAGTT TGTGATGAGATTAGAGTGTCTACAGCATCGAAATCTAGAAAACGATATGT TCCAGAAAGATTCTTACAGAACCATGCTATACCAACTGGAAATGAGGATT TCATCATGCCTGCTACCTTCCCCTATAAGGATATCATTGAAGGAATTCGT AATAGCAAAACGAGCAAAGGTTATATCGAGACTTCATCAGAAGCCATCTT GAATGCCTCAAAGAACGGTCACTACGACGACGTGAAAAACATTCTAGAGG AAGGGCTGGTCAACCCAGATGTTTCCGATAAAACAGGATTTTCTGCCATC ATGGCGGCCGCTGTGAATTGTCATACAGATGTCATCAATATTTTGTTAGA CCATGGTGGAAACATCAACCAGCTGACAGAGGAAGGTTTATCAGTCCTCT TGGCATGCCACATCCTCCTTTACACCAAGGAGAATTTCGTTGACAACATT GCAGAGAGCATTGCCAAAGAGAATCTCTTCAATTCAGTAGAAGTAGACAA GAAAACGGGATCGGTGAACAACCGTAATGAACGCAAATTGATCATGGCCA TCTTTGAAGATATACATCGCCCCTTCAATGGGTTACGCAAAGCTAAGATC GCAACGGCAGTAGTGAAAGGTAAAGGGAAGAGAGACTCGAGAGCTCCTTC GCCTTCTGCAGAGAATATGCTGGAAGATCTGGTGGAAGAAAACGAGAAGA CATTTGACCAatggaaaatgaacttttatCAAAACTCCATGGACCGTGTC AAAGAGGTTGAGGAGATCAACCAGTCGTTCAAACACATCATGTTAAAAGA TCCACATCGTATGACAGATTTGTTGTATATCTCAAACctagaaaattcaa aatcaagaGGTACCATCTCAATCAACACCATCAATGGACTTCAGTCCTTT GCCAATTTACCAATACCTACTCCCAACAAAAAGTTATACAGTTCCGGAGC CTATTATGTCGGTAATTTGCTTGGTAACCAGCGCAGTGGATGGGGGAAGC TACATTGGTCGTTCGGGTGTGAACATGAAGGCTACtataacaacaataaa agagatgGCAGAGGCACCTTGGCGTGGAAAGATGGTTCCGTTTACAAGGG TGACTTCAAAGATGATTTGAGACATGGTTATGGtgaaatttcatggccaa atgGAGAGTCCTACCTTGGGATGTTTGATACCGATATGAAACATGGTCAC GGGACCTACATTTGGCCGGAGATTGGAAAATACGAAGGGAACTTTGAGGA AGATCAAAAGCATGGATTTGGCGTCTTTACAATGAACAATGGTGATAAAT TTGAAGGTATTTATTTGAATGGGCAACGATGGGGTCCTGGTATATTCACT TATCACAAAGATGGGAGTCAGGATGTTGGTATATGGAAAGGAAGTCAATT GTTGAGAATCTGCTCTGTAATGGATGATGCTTGTTTGTTTGATCATCTTG TTCATCACAAAATCAATTCAGGAGGTCAAGTTTGTGATGAGATTAGAGTG TCTACAGCATCGAAATCTAGAAAACGATATGTTCCAGAAAGATTCTTACA GAACCATGCTATACCAACTGGAAATGAGGATTTCATCATGCCTGCTACCT TCCCCTATAAGGATATCATTGAAGGAATTCGTAATAGCAAAACGAGCAAA GGTTATATCGAGACTTCATCAGAAGCCATCTTGAATGCCTCAAAGAACGG TCACTACGACGACGTGAAAAACATTCTAGAGGAAGGGCTGGTCAACCCAG ATGTTTCCGATAAAACAGGATTTTCTGCCATCATGGCGGCCGCTGTGAAT TGTCATACAGATGTCATCAATATTTTGTTAGACCATGGTGGAAACATCAA CCAGCTGACAGAGGAAGGTTTATCAGTCCTCTTGGCATGCCACATCCTCC TTTACACCAAGGAGAATTTCGTTGACAACATTGCAGAGAGCATTGCCAAA GAGAATCTCTTCAATTCAGTAGAAGTAGACAAGAAAACGGGATCGGTGAA CAACCGTAATGAACGCAAATTGATCATGGCCATCTTTGAAGATATACATC GCCCCTTCAATGGGTTACGCAAAGCTAAGATCGCAACGGCAGTAGTGAAA GGTAAAGGGAAGAGAGACTCGAGAGCTCCTTCGCCTTCTGCAGAGAATAT GCTGGAAGATCTGGTGGAAGAAAACGAGAAGACATTTGACCAatggaaaa tgaacttttatCAAAACTCCATGGACCGTGTCAAAGAGGTTGAGGAGATC AACCAGTCGTTCAAACACATCATGTTAAAAGATCCACATCGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
| TCONS_00042573-exon-sc0003502-1491911889:3510..4164 | TCONS_00042573-exon-sc0003502-1491911889:3510..4164 | Clytia hemisphaerica | exon |
| TCONS_00042573-exon-sc0003502-1510915933:3510..4164 | TCONS_00042573-exon-sc0003502-1510915933:3510..4164 | Clytia hemisphaerica | exon |
| TCONS_00042573-exon-sc0003502-1575043694:3510..4164 | TCONS_00042573-exon-sc0003502-1575043694:3510..4164 | Clytia hemisphaerica | exon |
| TCONS_00042573-exon-sc0003502-1491911889:6015..6420 | TCONS_00042573-exon-sc0003502-1491911889:6015..6420 | Clytia hemisphaerica | exon |
| TCONS_00042573-exon-sc0003502-1510915933:6015..6420 | TCONS_00042573-exon-sc0003502-1510915933:6015..6420 | Clytia hemisphaerica | exon |
| TCONS_00042573-exon-sc0003502-1575043694:6015..6420 | TCONS_00042573-exon-sc0003502-1575043694:6015..6420 | Clytia hemisphaerica | exon |
| TCONS_00042573-exon-sc0003502-1491911889:6949..7414 | TCONS_00042573-exon-sc0003502-1491911889:6949..7414 | Clytia hemisphaerica | exon |
| TCONS_00042573-exon-sc0003502-1510915933:6949..7414 | TCONS_00042573-exon-sc0003502-1510915933:6949..7414 | Clytia hemisphaerica | exon |
| TCONS_00042573-exon-sc0003502-1575043694:6949..7414 | TCONS_00042573-exon-sc0003502-1575043694:6949..7414 | Clytia hemisphaerica | exon |
| TCONS_00042573-exon-sc0003502-1491911889:9161..9330 | TCONS_00042573-exon-sc0003502-1491911889:9161..9330 | Clytia hemisphaerica | exon |
| TCONS_00042573-exon-sc0003502-1510915933:9161..9330 | TCONS_00042573-exon-sc0003502-1510915933:9161..9330 | Clytia hemisphaerica | exon |
| TCONS_00042573-exon-sc0003502-1575043694:9161..9330 | TCONS_00042573-exon-sc0003502-1575043694:9161..9330 | Clytia hemisphaerica | exon |
| TCONS_00042573-exon-sc0003502-1491911889:9701..9985 | TCONS_00042573-exon-sc0003502-1491911889:9701..9985 | Clytia hemisphaerica | exon |
| TCONS_00042573-exon-sc0003502-1510915933:9701..9985 | TCONS_00042573-exon-sc0003502-1510915933:9701..9985 | Clytia hemisphaerica | exon |
| TCONS_00042573-exon-sc0003502-1575043694:9701..9985 | TCONS_00042573-exon-sc0003502-1575043694:9701..9985 | Clytia hemisphaerica | exon |
| TCONS_00042573-exon-sc0003502-1491911889:10626..10784 | TCONS_00042573-exon-sc0003502-1491911889:10626..10784 | Clytia hemisphaerica | exon |
| TCONS_00042573-exon-sc0003502-1510915933:10626..10784 | TCONS_00042573-exon-sc0003502-1510915933:10626..10784 | Clytia hemisphaerica | exon |
| TCONS_00042573-exon-sc0003502-1575043694:10626..10784 | TCONS_00042573-exon-sc0003502-1575043694:10626..10784 | Clytia hemisphaerica | exon |
| TCONS_00042573-exon-sc0003502-1491911889:11245..11300 | TCONS_00042573-exon-sc0003502-1491911889:11245..11300 | Clytia hemisphaerica | exon |
| TCONS_00042573-exon-sc0003502-1510915933:11245..11300 | TCONS_00042573-exon-sc0003502-1510915933:11245..11300 | Clytia hemisphaerica | exon |
| TCONS_00042573-exon-sc0003502-1575043694:11245..11300 | TCONS_00042573-exon-sc0003502-1575043694:11245..11300 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0003502 | supercontig | sc0003502:3510..11300 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
Blast
BLAST of TCONS_00042573 vs. Swiss-Prot (Human)
Match: ANKY1 (Ankyrin repeat and MYND domain-containing protein 1 OS=Homo sapiens GN=ANKMY1 PE=2 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 5.536e-24 Identity = 49/109 (44.95%), Postives = 70/109 (64.22%), Query Frame = 3
Query: 993 VYKGDFKDDLRHGYGEISWPNGESYLGMFDTDMKHGHGTYIWPEIGKYEGNFEEDQKHGFGVFTMNNGDKFEGIYLNGQRWGPGIFTYHKDGSQDVGIWKGSQLLRICS 1319
+Y+G+F +++ GYG+ SWP GESY G F D HG GTY+WP+ + G F + G+G M F+G+Y QR+GPG+ TY DGSQDVG+W QL+++C+
Sbjct: 1 MYQGEFGLNMKLGYGKFSWPTGESYHGQFYRDHCHGLGTYMWPDGSSFTGTFYLSHREGYGTMYMKT-RLFQGLYKADQRFGPGVETY-PDGSQDVGLWFREQLIKLCT 107 HSP 2 Score: 94.3597 bits (233), Expect = 8.808e-20 Identity = 94/388 (24.23%), Postives = 156/388 (40.21%), Query Frame = 3
Query: 858 YVGNLLGNQRSGWGKLHWSFGCEHEGYYNNNKRDGRGTLAWKDGSVYKGDF----------------------KDDLRHGYGEISWPNGESYLGM--------FDTDMKHGHGTYIWPEIGKYEGNFEEDQKHGFGVFTMNNGDKFEGIYLNGQRWGPGIFTYHKDGSQDVGIWKGSQLLRICSVMDDACLFDHLVHHKINSGGQVCDEIRVSTASKSRKRYVPERFLQNHAIPTGNED----FIM----------PATFPYKD-----------IIEGIRNSKTSKGYIETSSEAILNASKNGHYDDVKNILEEGLVNPDVSDKTGFSAIMAAAVNCHTDVINILLDHGGNINQLTEEGLSVLLACHILLYTKENFVDNIAESIAKE 1856
Y G N + G+GK W G + G + + G GT W DGS + G F K D R G G ++P+G +G+ T + G +PE F H +++ +K E WG ++G QD + + L + D+ L + + NS + S RK FL IP ED FI+ T+ +++ I+EG R+ G E S ++ ++ G+++ + IL++ + DV+D G++ + AAA +CH D++N+LLD G ++N+ ++EGL+ L C +L Y ++F N+AE E
Sbjct: 2 YQGEFGLNMKLGYGKFSWPTGESYHGQFYRDHCHGLGTYMWPDGSSFTGTFYLSHREGYGTMYMKTRLFQGLYKADQRFGPGVETYPDGSQDVGLWFREQLIKLCTQIPSGFSLLRYPE-------FSSFITHSPARISLSEEEKTE--------WG------LQEG-QDPFFYDYKRFL----LNDNLTLPPEMYVYSTNSD-------HLPMTSSFRKELDARIFLNE--IPPFVEDGEPWFIINETPLLVKIQKQTYKFRNKPAHTSWNMGAILEGKRSGFAPCGPKEQLSMEMILKAEEGNHEWICRILKDNFASADVADAKGYTVLAAAATHCHNDIVNLLLDCGADVNKCSDEGLTALSMCFLLHYPAQSFKPNVAERTIPE 354
The following BLAST results are available for this feature:
|