XLOC_026390 (gene) - C. hemisphaerica

Overview
NameXLOC_026390
Unique NameXLOC_026390
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0003502:3510..11300+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_026390 ID=XLOC_026390|Name=XLOC_026390|organism=Clytia hemisphaerica|type=gene|length=7791bp|location=Sequence derived from alignment at sc0003502:3510..11300+ (Clytia hemisphaerica)
TTTTATTAAATTCtagattttattatatttagatagattttattttatta ccattttattttacattcaggAAATTGTACGTATGTACCCTCTGAATTAt cgaatagaaatagaaatagaaatgtcATGCATGAAACTCTGATATCGGCC GGATATCTAATTAAATTTATCTCTATTCTTGACCAATATACCGCTCtgcc aatagacctttttttaaagaggcagccatgttgaataattatgtactcca gcataaaaacaatgatacagccatgcataatttttaaaatatgcatgacc atgatacagtaattatgcatggctgtatcattgtttttatgctggagtac ataattattcaacatggctgcctctttaaaaaaaggtctatatggTACAG AGCAAAGTGAATTGCAAGTCAGATTTGCAACTATGTGCGTGTTTTTCAAA GTTATTGTTGTGTTTCATTCAAGGTTTCATCATTTTCTCAGTTTGCTTAG TGAGTTTCACTCTCTTTGTACGGAATTGTGATTTTTCACTCTTTTTCAAT CTGTGATAACTTTTCTTTCATAAATgattttgatataattttttcttaCA TGGAAAGATGAAAGACTGAATAAAGATACCTGAAAAAATAATCATGAAAg ctactgtaagttggtctaatatcaacatcTCTCGtcttgaattgaattga ataataTATTTACTACCAGGTTAGGTAGAGGGATCACCCCTAATAGAAAc ttaattctaataaaaaatacagGGGTTGACCTAAATGtttaaagaaataa aagaataatcACAAAATAGTAAATATTCAAGAAGCTAAAATAAGTAAAAT ACTATATGACAACGGTtcgtatgtacatttaaaaacaGCTTTTTATTAGC TGcaaggttaaaaatattcataaGTTTTTCCATTCCTTATCCATTATTTT CATGAGATTTGTTAGGTAACGTATTTGCTTAGGTAGAAGTTTTGGGTCAG AGTTTTTAGCTTTGCAAGATCTAAATCAGAGATTTTTTCGTcagtaaatt ttctttgaagCTCATTCCATTGATTTGAAGAAATTCTAGTAAAAGAGTGT AATCTAAAATTTGTAGTGTTAACATTGGGGCGGAAAATAAGATCAATGAA CTGGTCTTTGGTTTCAATCTTGTGAggatctttttcaaaaacaagagTTT GAAGGGATTCAGCGGGAAGGTTGTTGTTGAAATATTTGTGAATATACTTG ATGTTCATTACTTTGACTTGGTCAAAGACATTGAGTAATTCTAGATTTGC TAAAAGGGGAGTGGCAGAGACTCGTGGACCATTGAAAGTCATGATCCTGA TTGCAGTATTTTGGAGAGTTTGAATTGatgtctaattccgacacccttct ttagagacaggattaatatgaaagcttgaatcactgattgaaaaaggatt attcctctctgaccactaagcaaagaaaaatagttttgacctttctatca atttcagctgataaaaatggtgttggaattagatgagggatgtcgacatt agaccaaattACGGTAAATTTATAGAGGAAAAATGGACTAAAGAAAAGTT TCAATACACAATTTCACAAAACCTTGCCTTAAAGAAACTGAGTTATTCAT TTggtaaaaaagttattaaaaaataaatgcaatacAATAATTTTGTGGAC CTGGTGATAAGTACAGTAATGGATATTATATTTCTTGTTAAATAGTAAAA AACTCCAGCCAGTATATATATAGttctaactcttcatacaaaacttatgg gaaacacatatttggactttgttaaTGCTGTAGGCAAATCATTGCACTCA cacaggaaatttcaaaaactttcaaaattgacctcaggaaatttatcccg aatttccctcatagccatgagattactagtacaaatttcACCTATTTGTC AGCTTTGGTTTGATAGTACATTTATTgaactctttttcaaaattggaata ttttttgaagttttttaatttAACTTGAAGTCGATAAGATAAGCTGGATT CAAGgaatatttctttcattttcttttttgtaatttttacatGGATTAAC TATcacagaattatttttttgcaacttttgttcaagatttttatttgaaa ttttaagataatttttgCCTATACCCCTTGGAACATGAAAAGGTTTCACA ACATCATAGATTACTCAGTAATTACTGGGTTCTGAATAGAGATCCGTTAC AGACCTGTCTGAAAAGTACCAGATAACTGATGAGATTTGAAACTGTTTCT CACTAGTCACAATCTATTGCCAAATTGACCTAATCCAGTGCTGTCCGATT TTAGCTGTTCTGTGCTTTAGatgttctgtaaaatatcaatAACACTGGTG GTTGCAATATCACATTTTGCAATCAAGATATTTCTATCAGTTTAATCAAA TAGCTGATGTGATAAGCCTCCTGCCACTCACtactttgttttctctttta taTAGGTGGAGAAGAGGAATCTGTCGCAGAAAGCAAACatgtgaaaaata atttcattcaAAGATGACAGATTTGTTGTATATCTCAAACctagaaaatt caaaatcaagaGGTACCATCTCAATCAACACCATCAATGGACTTCAGTCC TTTGCCAATTTACCAATACCTACTCCCAACAAAAAGTTATACAGTTCCGG AGCCTATTATGTCGGTAATTTGCTTGGTAACCAGCGCAGTGGATGGGGGA AGCTACATTGGTCGTTCGGGTGTGAACATGAAGGCTACtataacaacaat aaaagagatgGCAGAGGCACCTTGGCGTGGAAAGATGGTTCCGTTTACAA GGGTGACTTCAAAGATGATTTGAGACATGGTTATGGtgaaatttcatggc caaatgGAGAGGTTAGTTCATATTTACAACACCTATGAAACTAACTATAG TTCTATCGAGTAAATTATTAGAATGTCAATtggtcattccattttatatc catacaggggggtggacgagcatttccagagggtaatccgagaaaaaATT CTAGGGGgtcttctttcatttttccaagggggtaaaaagttattctaaaa tttccacagggtaaaagactgattttcgTCCAGCCTCACtttaaagtata aaaagaatttttccaagggtgcctttgcaaattttgccattttctagGGG GTAtcgacacattttcaataaattttttttgacttgaaatggTTTGTCCA CCCCCTacgtatggttttttaatggaacagctcAATGTGTTTGTACTACA GAAGATGCAAATTGATGATAAGATCGTTCACGTTTTTGTTTGGTTGTTGT AATAGCAATATATCTAATATAGAAGAATTTTTTCATTCTCAAACATTTAG AAAACCGTTtctctaaatgaaaaaatctttctacTTTAGTCCTACCTTGG GATGTTTGATACCGATATGAAACATGGTCACGGGACCTACATTTGGCCGG AGATTGGAAAATACGAAGGGAACTTTGAGGAAGATCAAAAGCATGGATTT GGCGTCTTTACAATGAACAATGGTGATAAATTTGAAGGTATTTATTTGAA TGGGCAACGATGGGGTCCTGGTATATTCACTTATCACAAAGATGGGAGTC AGGATGTTGGTATATGGAAAGGAAGTCAATTGTTGAGAATCTGCTCTGTA ATGGATGATGCTTGTTTGTTTGATCATCTTGTTCATCACAAAATCAATTC AGGAGGTCAAGTTTGTGATGAGATTAGAGTGTCTACAGCATCGAAATCTA GAAAACGATATGTTCCAGAAAGATTCTTACAGAACCATGCTATACCAACT GGAAATGAGGATTTCATCATGCCTGCTACCTTCCCCTATAAGGATATCAT TGAAGGTGAGtttctaatgttttttaaaCTACAACCTATCTTTTACTGAA AAAGTGGTAGAAAAGTCTAGATACAGAGTCGAATCATATCAATCACTGTA AGACATCATTTTGCTGTCATCGAAACTTTATACAGTTTGTGAGGACAagg gttttttcaaaaaagtttgtcttaatcagtgttgcaacttttccgTCTGT AGACGGATATCCGTCCAGTTGAGATAAAAATATATCATTTCCATCTTGCC AGTAAGAGGGTTTTTGTTCAAATGACCATCTAATCCTAAGGTTTCCGTCC ATATTCACAAGACCTAGTTGCAACACTGCTTAATGATCCAAAAGTTAACT GATGTTTCATAAACTTTAGGTCTCAAATAACTAATATTAAGGATGATTTG GAAAGGTTTTTTAATGAGATGATGAAAATTTACCCACAATCGTCTTGAAA CAGAACCGATAATTCCCACtgtgaagaaaagaagaaaaatctcaTTTACA TTACTCATTCGTTTTAACATGCTAAtgttaaaataattatttttccaaaa gtcATTATTTTAGGACTGTACTCATActatgaaaagaaataattcctACC AAGTTATTTAATGAATTTGCACGAatttgaaaacttgttttttatacATG ATATCTTCTTATACTCCTCCCTTTCCCTCCTTAAATTTGCAGTATTTCTT AACTTGTGAACTGTTGGACAATTATCCGTTATTATAGGAAAATATTGGCT TGACTGTTTTTTGTGTTCTTTTTCAAGATGACCCTCAAATTTCTAGGCTA GAATCTGCTAGAATATCTTCACTTTTGATGCcttcaaaaaaaggaaatgA TTAAGATTACCTACCCAGAAAtaaagaaaagacacttttttattctgcta ctggcagaATCAGtgtcttttctttctgactgaCATCGCTCTACTTATGT AAAAGACTGAAGAATTACTTACCTACCCAGAAATAGAAATCAATCGATCG AAAACAAGTCAGTTAAATAGGAAAAACGTTTTCAAAATTATGTTGTTCCC GAATCAGCTATTGTGTATTTTGATCACtggaaattgtttttaaaaagttc atcattGCCCATAGATCCTGTGATTAAAACTACGGCCGGTTAGATACCGA CCAAAACACGAGGCTGCTAATTTTATATTCGACATTGTTATTATCAAACG AACAACCAAAAGAAAACGAATTTCGATCACTCAATCACATACATCCCACT CTTACAAAAGTTTTCTTCCTTACTCTATTCTTTCTAATATTTTGATAGGA AAAAGTTAGGCCGGTTATCTGCTAAAGCCGACTAGATATAGAAAATATCG ACAACAAGCCAAATGTCTCAAAAAGTTTTTGCGCCTTAGGTCAACTTTGA AATGAgttaaaaatgtatcaaataaAGAACCAAAAGATTCGATCACTTCT ACACttcactttcaaaatattttgcactcactgacctttatatacagttg acgttctctaatttgacgttctactattcgataggctcccttattcgatg aaacttaaagtccctgtcaacaagaaattctcataaacgacgttccctaa ttcgataagctcccttatttgacgaaaatccaattccccttgaagatcga attagagagcgtcaactgtaaatctttttttgctccttgtttataaaggt cagtgattgcACTGCTCTTttgctctattttttttttcattattttgata gGAATTCGTAATAGCAAAACGAGCAAAGGTTATATCGAGACTTCATCAGA AGCCATCTTGAATGCCTCAAAGAACGGTCACTACGACGACGTGAAAAACA TTCTAGAGGAAGGGCTGGTCAACCCAGATGTTTCCGATAAAACAGGATTT TCTGCCATCATGGCGGCCGCTGTAAGtctttcatttgtttttgtCCTTTG GTTAATCGGGGACATGATATATGTGCTCCCGTACCACGTTTTTTCTGAAC TTAATAAAACCACTTATCGCCTTTGGTGTACTGGAACATATATGTAGCGC TTGATAGCACTCGGCATTGATTATTTGACCAAAAACTActgttaaaatat aaaaatttaagtTATAATCGATTGTGAATTAGACAGTGTTCTTGATAAGC AATATATCTTTATATAACAACTAACATTTGACACCTTTCTGCTGAAAAAA ATTGTGGTGTTTTATGTTTCTTTGTTTGTAAGATTCCTTTAGCGAATTTT AACTTATGATAATCCATACTTGCATCTCGTCACGTTACCAGGTGAATTGT CATACAGATGTCATCAATATTTTGTTAGACCATGGTGGAAACATCAACCA GCTGACAGAGGAAGGTTTATCAGTCCTCTTGGCATGCCACATCCTCCTTT ACACCAAGGAGAATTTCGTTGACAACATTGCAGAGAGCATTGCCAAAGAG AATCTCTTCAATTCAGTAGAAGTAGACAAGAAAACGGGATCGGTGAACAA CCGTAATGAACGCAAATTGATCATGGCCATCTTTGAAGATATACATCGCC CCTTCAATGGGTTACGCAAAGCTAAGGTAGAAGCATTTATTCATTTTGAG AATAGTCTATGGGTTTGCTGCAAATAAATCACTTTCTATAAACGATTGTG TATATTATTACACGCATTTGTGTTTTTCAACAGATCGCAACTCAACTaaa gttttccctattttcgctaaaataaatctggctaaaacacgccgaatcga cagatcgctaaaatttatctgcACGAAATTTCTGTTTATATTggcttgat acatttttatcaataggaagggtttcagtgcaaagaaatgctagaaaacg agttcagtcaataatgtaatacgagtattcacTAAAATTTATCTGCACGA AATTTCTGTTTATATTggcttgatacatttttatcaataggaaggggttc agtgcaaagaaatgctagaaaacgagttcagtcaataatgtaatacgagt attcgctaaaatttatccacgcgaaattttttgaaatcgtgatttgctaa aataaatccaaaaacaatcaagattttcctgactcgctaatacgctaaaa ttagtctcgctaaaatttctacgattaaagtatgacATTGTTTGCAGTTG CTTAGTGGACGGAAACTAACGTGAATGAATAAGTAATTCAACAAATTTAT TCTTACATTTCCATAGATCGCAACGGCAGTAGTGAAAGGTAAAGGGAAGA GAGACTCGAGAGCTCCTTCGCCTTCTGCAGAGAATATGCTGGAAGATCTG GTGGAAGAAAACGAGAAGACATTTGACCAatggaaaatgaacttttatCA AAACTCCATGGACCGTGTCAAAGAGGTGAGCTCTTAATATAAGTGATCTA ATTCCCTTTGTTGATAACAATAGCTGCAGTGTGTGTTCTTTAGATTCAGA TGAGTAACCCCAAACCCCAAATATTATAATGTTAATCTTTTCCTTCATAG GTCTAGATTAGCTAAATAATTTTTACATCTTTCATCCAATTTTTGAGAGG ATTATAGATGTAACATCACAGGAGGGTCTGTATAATTACTCCAAATGTGG CAGCAGCAACCTTAAAATTGTCCTCTGCAATGTCTTTTTTTTGTCGGCGA GAAAAACTCTTTATTTTAAAACCAGAACTGACTATTCTTTTTGGAATCCT TAATCTTTTACAAACTTGGTTTAAGGTTGAGGAGATCAACCAGTCGTTCA NTGTCGGCGAGAAAAACTCTTTATTTTAAAACCAGAACTGACTATTCTTT TTGGAATCCTTAATCTTTTACAAACTTGGTTTAAGGTTGAGGAGATCAAC CAGTCGTTCAAACACATCATGTTAAAAGATCCACATCGTTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00042572TCONS_00042572Clytia hemisphaericatranscript
TCONS_00042573TCONS_00042573Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00042573-proteinTCONS_00042573-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003502supercontigsc0003502:3510..11300 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.86 8.75 3.3 2.68 64.43 48.83 23.82 26.02 12.72 21.13 15.19 13.67 7.69 7.08 6.05 7.42 7.84 7.98 9.58 9.83 7.2 8.13 6.87 8.56 102.36 59.25 4.85 3.8 7.66 7.73