TCONS_00042311 (transcript) - C. hemisphaerica

Overview
NameTCONS_00042311
Unique NameTCONS_00042311
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length158

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00042311 ID=TCONS_00042311|Name=TCONS_00042311|organism=Clytia hemisphaerica|type=transcript|length=158bp
CGAAAAGTTTGGCCAGAAGTTGCAGGAGAAGTTCAAGAGATCCGTAGAGC
ATTCAAACAATTTGTCCCCCGGTTGCAAGCTGTTCATGATAAAGAAGGAC
ATTGTATAAAAATGTTGTTTGGTTGAACTGTTTATTGTAAAACAACCTGC
ATTGTGCT
Run BLAST on NCBI

transcript from alignment at sc0003343:3577..3734

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00042311 ID=TCONS_00042311|Name=TCONS_00042311|organism=Clytia hemisphaerica|type=transcript|length=158bp|location=Sequence derived from alignment at sc0003343:3577..3734 (Clytia hemisphaerica)
AGCACAATGCAGGTTGTTTTACAATAAACAGTTCAACCAAACAACATTTT
TATACAATGTCCTTCTTTATCATGAACAGCTTGCAACCGGGGGACAAATT
GTTTGAATGCTCTACGGATCTCTTGAACTTCTCCTGCAACTTCTGGCCAA
ACTTTTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_026167XLOC_026167Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042311-exon-sc0003343-1491911889:3577..3734TCONS_00042311-exon-sc0003343-1491911889:3577..3734Clytia hemisphaericaexon
TCONS_00042311-exon-sc0003343-1510915933:3577..3734TCONS_00042311-exon-sc0003343-1510915933:3577..3734Clytia hemisphaericaexon
TCONS_00042311-exon-sc0003343-1575043694:3577..3734TCONS_00042311-exon-sc0003343-1575043694:3577..3734Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003343supercontigsc0003343:3577..3734 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00042311 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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