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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL72158_cuf0 >transcript:BL72158_cuf0-protein ID=transcript:BL72158_cuf0-protein|Name=transcript:BL72158_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=177bp
MSSCNSSNDSLLHLLINCHRLISSVATCIKLEWIDLSDLSCKTISSPCFL
SLSITALETLSLKDGVTIVDGTLSGKSYFFCHASKSAPRHCLSCLKYASV
SSATMPSATQRCLSTVSVGSNGFHTVSPSSEPPLTLSSSVSSRHGDRCRP
RSHRRRFSGTSASGDEVWRFLDADWSS Run BLAST on NCBI mRNA from alignment at Sc0000536:94389..97150- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL72158_cuf0 ID=transcript:BL72158_cuf0|Name=transcript:BL72158_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2762bp|location=Sequence derived from alignment at Sc0000536:94389..97150- (Branchiostoma lanceolatum)
ATGCCGGGAGCTGAAGTCTGCCCGCACGTTGTCTCTCCCTGGGATGTGTT
CTGCTGAAATGGACAGATTCCTGTCCGTGCACCACTCCCACAGGTCCAAG
GTTACGCTCAGCAGTTCTAGCGACCTCGTGCCTCCTAGGTGGTTGAGATA
AGCCACCACTGTTGAGTTGTCGGAGCGAACTCTGATGTGCCCGCTCTGTA
ACTCCCTGCAGAAACCTCTGACTGCGAGGGAGGCAGCTTGCAGCTCCAAC
ACGTTGATGTGTGCTGTTCTCTCCTCTGCTGACCAGCGGCCTCCCGTGTG
GACGCCGTTGCAGAATCCGCCCCATCCGATCTTGGATGCATCTGTCTCCA
CGACCATGTCTGCTGTGGGCAAAAGGATTGGGCGACTGTTGTGGTTGGAT
AGCTGATCCCTCCACCATCTTAGGTCTGCTCGAGCTGCCTCTGTCAGCGG
CACTAGAAACTCCCAGTTCCCTCTCGTCACTCTGAGAACTGTGATGAGCA
GACGCTGAAGACTTCTGAAGTGCAGTGGTGCGTGCCAGACTGCCCCTGTC
GTGGCTTGCATCTTCCCTATCAAGCTCGCCAACTCTCTTGCTGTGATGAG
ACTGTCTGTGGAAAGTGTAGCAACTGCTAGCTGCTGCAACTCCTGCACCT
TGCCGTCGGGTAGAAAGGCTATCATCCGCAGAGAGTCTATTCCTGAACCC
AGAAAAGTAATGCGCTGTGTTGGCTCCAAGATCGACTTCTCTCTGTTTGG
GACGAAGCCCAGGCTGGAAAGTAACTGTAGAACTGCCATCAGCGCCTCTC
GACAGCCCTCTCTTGTACGTCCGAAGACCAGCACATCGTCTAGGTAGACA
ATCAACCTGTAGCCTTGTCTTCTCAGCAGGGCGATGGGCACCTTCAGTAC
CTTGGTAAAGACCCTTGGTGCGGTTGCGGCGCCGAACGGGACGCACTGGA
ACTGGTAAAATCGCCCCTGCCACTGGAACGTCAAGAACCTGCGACTGTTC
ACATCTACCGGTATGGTAAAGTAGGCATCCTTGAGATCCACCTTTCCCAT
GAAGTCGCCTGGCTGTAGGAGATGCTTCAGCACACCTAAACCCTCCATCT
TGAACCGCCGAACTTGCAGATATCTGTTGAGAGGTTTGAGGTTGATCACG
GGTCTTAGACCCCCCGTCTTCTTGGGTACTGTAAACAAAGTCGAGACAAA
CTGCGTGCTGTGATAAGGCACTTATCGCTCCCTTGGAAAGTAACACTCCT
ACTTCTTCGTTGAGGACCTCCACTTGCTGGGGACCTCTTGCTCGACAAGA
TGGAAGTCGGCGTTGAATCGGCGGCGTTGTCGCAAACTCCAACTTGTACC
CTCTGACGCACTGTAGAACCCACGGATCCGAGGTGAGCTGCTGCCACTTC
TGAAGAAAGTGAACTAGTCTGCCTCCGTGCAGCATCTGAGAGGTGCCGGG
TACACGTTGAAGGTCGGTCGAACACCGAGCCGCTTCTCTTGTCAAAGATG
AGACTGCTACTTGTCCTGCTTCCCTCCTTCCCCCTGCTTCTGAAAAGACT
GGGAAGGGCCTCTGTTGTAGTACTGTCGAGTACGGCCACCTCGACTGTAG
TTTGGCCTCGGCAAGTAGTTGTAGCGGTTGCTTCTGTAGCCTCCGCCTGA
AGGTCTGTAGCCTCTGCCTGAAGGTCTGTAGCCGCCGCCGCGACGACCTC
CACGTCCTGAGCTGGAAGACTTGTTCTTCTCCGTCTGCGTCATCATCCCG
GACAGGACCTTACTCTCTGACGACAGGTCTTTCGCCTTCGTCCCCAGGTC
CGGCGAGAAGAGGAAGTTGGGATCTTCTGACGGCGTCTTGAAGAGCTCCC
GGAACGTCTTCTGGGAAGACTCAGCAATAAAAGAACGACGTGTAAATGCC
AGCTGGGTATGGACCGAGCCTAACAGACGAAGGGCTGTCCCTGCACAGTC
ATTCATGTCTAGCTGCAACTCTTCAAACGACTCACTACTGCATCTCTTAA
TCAACTGCCATAGGTTGATCAGCAGCGTAGCAACTTGCATCAAATTAGAA
TGGATCGACTTGAGCGACTTATCGTGCAAAACGATCAGCTCACCCTGTTT
CTTGTCGTTGTCGATCACCGCCCTGGAAACGTTGTCGTTGAAAGACGGCG
TCACCATCGTAGATGGCACGTTGTCCGGCAAGTCGTACTTCTTCTGCCAC
GCTTCTAAGTCGGCGCCCCGACACTGTCTGTCGTGCTTGAAGTACGCCTC
CGTCTCCTCCGCGACGATGCCGTCGGCGACCCAGCGATGTCTCTCCACCG
TGTCCGTCGGGTCGAACGGCTTCCACACAGTCTCCCCGTCTTCGGAACCG
CCGCTGACGCTCTCTTCCTCCGTCTCGTCACGGCACGGGGACCGCTGTCG
ACCTCGGTCGCATCGCCGCCGCTTCTCCGGGACGTCCGCCTCCGGAGACG
AAGTGTGGCGCTTCCTGGATGCCGACTGGTCGAGCTGAGACATCACCATC
TCCTGAAAGGTGTCCAGCTTATCTGAAAGCAAAAAGAAACCCTGCTCTAG
AGCAGAAATACGTACGTCACCGCTGGGCGTCACTGGAACTGGTGAGCGCT
GTACGTTGTTGTTCTTCTCGCTCTCGCTGACTTCTCCATCTTGTTGAGAG
CCATCGGCGCCATCGGCGCCTCCGCCTCGCTTGTTGCCATCCTTCCGCCG
AGTGTCCCCCTTCTCGGGGTCGGAAGACACCTCGCCTTCTTCTCGAAGTG
CTGCACTGGGAC Coding sequence (CDS) from alignment at Sc0000536:94389..97150- >transcript:BL72158_cuf0 ID=transcript:BL72158_cuf0|Name=transcript:BL72158_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=534bp|location=Sequence derived from alignment at Sc0000536:94389..97150- (Branchiostoma lanceolatum)
ATGTCTAGCTGCAACTCTTCAAACGACTCACTACTGCATCTCTTAATCAA
CTGCCATAGGTTGATCAGCAGCGTAGCAACTTGCATCAAATTAGAATGGA
TCGACTTGAGCGACTTATCGTGCAAAACGATCAGCTCACCCTGTTTCTTG
TCGTTGTCGATCACCGCCCTGGAAACGTTGTCGTTGAAAGACGGCGTCAC
CATCGTAGATGGCACGTTGTCCGGCAAGTCGTACTTCTTCTGCCACGCTT
CTAAGTCGGCGCCCCGACACTGTCTGTCGTGCTTGAAGTACGCCTCCGTC
TCCTCCGCGACGATGCCGTCGGCGACCCAGCGATGTCTCTCCACCGTGTC
CGTCGGGTCGAACGGCTTCCACACAGTCTCCCCGTCTTCGGAACCGCCGC
TGACGCTCTCTTCCTCCGTCTCGTCACGGCACGGGGACCGCTGTCGACCT
CGGTCGCATCGCCGCCGCTTCTCCGGGACGTCCGCCTCCGGAGACGAAGT
GTGGCGCTTCCTGGATGCCGACTGGTCGAGCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000536 | genome | Sc0000536:94389..97150 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL72158_cuf0 |
| Biotype | protein_coding |
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