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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL70646_cuf0 >transcript:BL70646_cuf0-protein ID=transcript:BL70646_cuf0-protein|Name=transcript:BL70646_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=362bp
MGAYKYTTYQVGLLGMGQQQWMYSSLLQQGTLEKVRKNEITIRLPKITSS
EDSEHYSPAPATSAPCNTPVPATGAPFNTPAPATSAPCSTPVPATGAPCN
TPEVCYLPPIPDAAPATCRCSEGGDFKFRYKRYNNRHDSWRNNTIVSRVE
IGQHLPKDTSQIVEHQNDNDSTARYSRKKRQNYRKFGIRNSEKDRTELPY
LDVEQGSGKSEDVRRCHHSKLGGKKEAKCAKVMIVIPCGTADDNDHEGST
KDKGDANTLENITLDKKRFQSSKTTKLPPIKTSCRKKTLMELPRIPVGEE
DLKQSMARQSAVKCLNEETRLQSSGSQGGNKTDNRTVDDKTSLSLPNISF
VHTQNLLFTYAS Run BLAST on NCBI mRNA from alignment at Sc0000255:272041..274531- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL70646_cuf0 ID=transcript:BL70646_cuf0|Name=transcript:BL70646_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2491bp|location=Sequence derived from alignment at Sc0000255:272041..274531- (Branchiostoma lanceolatum)
CTCATCAATACAGAATACAAACATGTCGAGTTAACAGTTACCCGGTGGCT
TATTTAGGCTCCACATTGCTTCTCATAACAAAATGTAACATTTGTGGGGG
GCTTAATAGATGCGGAGTAGTGGCAACATTACATCATGGGTGCTTACAAG
TACACCACTTACCAAGGTGAGTGCATTTCTGAAGAGTGTTTTGGATTGAC
TGGAACATACTCAGAACTCTGAACCCAGGTAGGTAATAGTGTATGTGTTG
TAGACTTTTGTGTTTTTGATTGATTTTTTTTAAACACTCATGCCTACACG
CTGTGTAATGGACTAAAAAAAGGATTTCCTGTGACGTGTGTGAAATTGTA
ACATTACTAGTGAGTCAAGGCCTTGCCGTCTTTAATTTTAGTTTGCTGTT
CCAGTTGGACTGCTAGGCATGGGGCAACAGCAGTGGATGTACAGCAGCTT
GCTACAACAAGGGACCCTCGAAAAAGTCAGGAAGGTGGGAGACATAAAAA
TTACGTACTNTCGAAAAAGTCAGGAAGGTGGGAGACATAAAAATTATGTA
CTGAAGCTTTTTAGAAAACATGTTACCAGATTATGAAAGTGGCTTTATAT
TGCTCAACTTTTTATGTACTAGTGACCACCTGCACATAAGGACCACCTGT
CCAATGTGACCACTGAGCCATACCATAGGCTTAGCTTTGTTGTATGGCTG
ATACAATAATACTGTGTTAACTTGTATGTCTTCAATTTTAGTGAAACTAG
TCAAAACTGCCCAAGAAGACCACTTTAATAGGTGACCAATAGGATCTAGT
CTATGTGGACAGGTGGTCACTACACATAGGATTCTTAATGCTTGCATGGA
AAAATCATCTAAGGCACCACCAAAAGGTGGTCACATTGAACAGGTGGTTG
TTATGTACAGGTGGTCACTAGTACAGGTTTGACTGTAATCTGAAAAGGTA
ATTTTAGCCCTGGTACCATGACATATCATGCCATTGGAAATGGAACAAGA
AATTCTAGTCGTAAAAATTTCGATTCATCATGGAAACAGCTGATTTCTAT
CACATTCAAGGCTTATTTGGGCTTCGCTAAGGGCATATACTGTTAATCCA
TATCGATATTGCGTTAGGTAATTTCAGCACCTGAAAGGTGTTCATGGCAT
TTAATTTTAAGGGTGGAAAGACCAAATTGTGAAGGACACAGGCTTAAACA
GTCGGGAAGCAGAGGCTAGGGCAAGGGACAGGACTGCTTGGAGGATCCTC
CTGGAAAGCAAGGGGCCAGTTTCTGGCCTGAGCACGTAGGCAGGTGGAAA
CAAATGTTAGTGATCAAATATTTACAATGATGAAATTTCAGCGGTTGACT
AGTGACCAAGAAATACAGTAGTCGTTCAATTTTATTGTATTGTTCACAGA
ATGAAATCACCATCAGGCTACCAAAGATTACATCATCAGAAGACTCTGAG
CACTACTCACCCGCACCTGCAACAAGTGCACCCTGTAATACACCTGTACC
TGCAACAGGTGCGCCCTTTAACACACCTGCACCTGCAACAAGTGCACCCT
GTAGCACACCTGTACCTGCAACAGGTGCACCCTGTAACACACCTGAGGTG
TGCTACCTCCCACCCATCCCAGATGCTGCACCTGCCACCTGCAGGTGTTC
TGAAGGAGGAGACTTCAAGTTCAGGTATAAACGATACAACAACAGACATG
ATTCGTGGAGAAACAATACCATTGTCAGTCGGGTTGAAATTGGACAACAT
CTGCCTAAGGACACTTCACAGATAGTTGAGCATCAAAACGACAACGATTC
TACTGCAAGGTATTCCAGAAAAAAACGACAGAATTATCGAAAATTTGGCA
TTCGTAACTCCGAAAAGGACAGAACTGAATTGCCGTATCTTGATGTTGAA
CAAGGGTCAGGAAAAAGCGAAGATGTTCGAAGGTGTCACCATAGTAAGCT
TGGTGGAAAGAAGGAAGCAAAGTGTGCCAAAGTTATGATAGTCATTCCAT
GCGGGACAGCAGATGATAATGATCATGAAGGCTCAACAAAAGACAAGGGT
GATGCGAACACACTGGAAAATATTACCCTAGACAAGAAGAGATTCCAGTC
AAGCAAGACAACTAAACTGCCTCCGATTAAGACTTCTTGTAGAAAGAAGA
CGTTGATGGAATTGCCTAGAATACCAGTGGGAGAGGAAGATCTAAAGCAA
TCCATGGCAAGGCAGTCTGCTGTAAAATGTCTGAATGAAGAGACACGACT
CCAGTCATCAGGGAGTCAGGGTGGAAACAAAACTGACAACAGAACCGTCG
ACGATAAGACTTCACTGTCTTTACCAAATATTTCTTTTGTTCATACTCAA
AATCTACTTTTTACATATGCCAGCTAGACATCTACATTGATGTGATGAAC
ATTACAGTCTAAAAATACACAATTTAAAACAATTTTTAAAAAAATGATTT
AAAATTATATTTTCAATTATGACCAAGTCATTACAACATTG Coding sequence (CDS) from alignment at Sc0000255:272041..274531- >transcript:BL70646_cuf0 ID=transcript:BL70646_cuf0|Name=transcript:BL70646_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=3267bp|location=Sequence derived from alignment at Sc0000255:272041..274531- (Branchiostoma lanceolatum)
ATGGGTGCTTACAAGTACACCACTTACCAAGTTGGACTGCTAGGCATGGG
GCAACAGCAGTGGATGTACAGCAGCTTGCTACAACAAGGGACCCTCGAAA
AAGTCAGGAAGAATGAAATCACCATCAGGCTACCAAAGATTACATCATCA
GAAGACTCTGAGCACTACTCACCCGCACCTGCAACAAGTGCACCCTGTAA
TACACCTGTACCTGCAACAGGTGCGCCCTTTAACACACCTGCACCTGCAA
CAAGTGCACCCTGTAGCACACCTGTACCTGCAACAGGTGCACCCTGTAAC
ACACCTGAGGTGTGCTACCTCCCACCCATCCCAGATGCTGCACCTGCCAC
CTGCAGGTGTTCTGAAGGAGGAGACTTCAAGTTCAGGTATAAACGATACA
ACAACAGACATGATTCGTGGAGAAACAATACCATTGTCAGTCGGGTTGAA
ATTGGACAACATCTGCCTAAGGACACTTCACAGATAGTTGAGCATCAAAA
CGACAACGATTCTACTGCAAGGTATTCCAGAAAAAAACGACAGAATTATC
GAAAATTTGGCATTCGTAACTCCGAAAAGGACAGAACTGAATTGCCGTAT
CTTGATGTTGAACAAGGGTCAGGAAAAAGCGAAGATGTTCGAAGGTGTCA
CCATAGTAAGCTTGGTGGAAAGAAGGAAGCAAAGTGTGCCAAAGTTATGA
TAGTCATTCCATGCGGGACAGCAGATGATAATGATCATGAAGGCTCAACA
AAAGACAAGGGTGATGCGAACACACTGGAAAATATTACCCTAGACAAGAA
GAGATTCCAGTCAAGCAAGACAACTAAACTGCCTCCGATTAAGACTTCTT
GTAGAAAGAAGACGTTGATGGAATTGCCTAGAATACCAGTGGGAGAGGAA
GATCTAAAGCAATCCATGGCAAGGCAGTCTGCTGTAAAATGTCTGAATGA
AGAGACACGACTCCAGTCATCAGGGAGTCAGGGTGGAAACAAAACTGACA
ACAGAACCGTCGACGATAAGACTTCACTGTCTTTACCAAATATTTCTTTT
GTTCATACTCAAAATCTACTTTTTACATATGCCAGCTAGATGGGTGCTTA
CAAGTACACCACTTACCAAGTTGGACTGCTAGGCATGGGGCAACAGCAGT
GGATGTACAGCAGCTTGCTACAACAAGGGACCCTCGAAAAAGTCAGGAAG
AATGAAATCACCATCAGGCTACCAAAGATTACATCATCAGAAGACTCTGA
GCACTACTCACCCGCACCTGCAACAAGTGCACCCTGTAATACACCTGTAC
CTGCAACAGGTGCGCCCTTTAACACACCTGCACCTGCAACAAGTGCACCC
TGTAGCACACCTGTACCTGCAACAGGTGCACCCTGTAACACACCTGAGGT
GTGCTACCTCCCACCCATCCCAGATGCTGCACCTGCCACCTGCAGGTGTT
CTGAAGGAGGAGACTTCAAGTTCAGGTATAAACGATACAACAACAGACAT
GATTCGTGGAGAAACAATACCATTGTCAGTCGGGTTGAAATTGGACAACA
TCTGCCTAAGGACACTTCACAGATAGTTGAGCATCAAAACGACAACGATT
CTACTGCAAGGTATTCCAGAAAAAAACGACAGAATTATCGAAAATTTGGC
ATTCGTAACTCCGAAAAGGACAGAACTGAATTGCCGTATCTTGATGTTGA
ACAAGGGTCAGGAAAAAGCGAAGATGTTCGAAGGTGTCACCATAGTAAGC
TTGGTGGAAAGAAGGAAGCAAAGTGTGCCAAAGTTATGATAGTCATTCCA
TGCGGGACAGCAGATGATAATGATCATGAAGGCTCAACAAAAGACAAGGG
TGATGCGAACACACTGGAAAATATTACCCTAGACAAGAAGAGATTCCAGT
CAAGCAAGACAACTAAACTGCCTCCGATTAAGACTTCTTGTAGAAAGAAG
ACGTTGATGGAATTGCCTAGAATACCAGTGGGAGAGGAAGATCTAAAGCA
ATCCATGGCAAGGCAGTCTGCTGTAAAATGTCTGAATGAAGAGACACGAC
TCCAGTCATCAGGGAGTCAGGGTGGAAACAAAACTGACAACAGAACCGTC
GACGATAAGACTTCACTGTCTTTACCAAATATTTCTTTTGTTCATACTCA
AAATCTACTTTTTACATATGCCAGCTAGATGGGTGCTTACAAGTACACCA
CTTACCAAGTTGGACTGCTAGGCATGGGGCAACAGCAGTGGATGTACAGC
AGCTTGCTACAACAAGGGACCCTCGAAAAAGTCAGGAAGAATGAAATCAC
CATCAGGCTACCAAAGATTACATCATCAGAAGACTCTGAGCACTACTCAC
CCGCACCTGCAACAAGTGCACCCTGTAATACACCTGTACCTGCAACAGGT
GCGCCCTTTAACACACCTGCACCTGCAACAAGTGCACCCTGTAGCACACC
TGTACCTGCAACAGGTGCACCCTGTAACACACCTGAGGTGTGCTACCTCC
CACCCATCCCAGATGCTGCACCTGCCACCTGCAGGTGTTCTGAAGGAGGA
GACTTCAAGTTCAGGTATAAACGATACAACAACAGACATGATTCGTGGAG
AAACAATACCATTGTCAGTCGGGTTGAAATTGGACAACATCTGCCTAAGG
ACACTTCACAGATAGTTGAGCATCAAAACGACAACGATTCTACTGCAAGG
TATTCCAGAAAAAAACGACAGAATTATCGAAAATTTGGCATTCGTAACTC
CGAAAAGGACAGAACTGAATTGCCGTATCTTGATGTTGAACAAGGGTCAG
GAAAAAGCGAAGATGTTCGAAGGTGTCACCATAGTAAGCTTGGTGGAAAG
AAGGAAGCAAAGTGTGCCAAAGTTATGATAGTCATTCCATGCGGGACAGC
AGATGATAATGATCATGAAGGCTCAACAAAAGACAAGGGTGATGCGAACA
CACTGGAAAATATTACCCTAGACAAGAAGAGATTCCAGTCAAGCAAGACA
ACTAAACTGCCTCCGATTAAGACTTCTTGTAGAAAGAAGACGTTGATGGA
ATTGCCTAGAATACCAGTGGGAGAGGAAGATCTAAAGCAATCCATGGCAA
GGCAGTCTGCTGTAAAATGTCTGAATGAAGAGACACGACTCCAGTCATCA
GGGAGTCAGGGTGGAAACAAAACTGACAACAGAACCGTCGACGATAAGAC
TTCACTGTCTTTACCAAATATTTCTTTTGTTCATACTCAAAATCTACTTT
TTACATATGCCAGCTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000255 | genome | Sc0000255:272041..274531 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL70646_cuf0 |
| Biotype | protein_coding |
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