TCONS_00040769 (transcript) - C. hemisphaerica

Overview
NameTCONS_00040769
Unique NameTCONS_00040769
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length368

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00040769 ID=TCONS_00040769|Name=TCONS_00040769|organism=Clytia hemisphaerica|type=transcript|length=368bp
cccccctttaTCGGCCAAATGCcgataaaaaaattcgaaaatctttTGTC
GATGACCCCttagagagatttgaagaccttcattttttgacactttcaaa
atttttgggtaCGTACCAGCTTTTTGCTTTAGCTATCTCCGGgttaattt
gagaaaaaatgaaattccccAGGTTTTGCTCATGGTGGTTGAGGCAACAC
CAtcaattattttccttttctgaTGTTAATTTGCAGATCCTCCCCTACTA
TTACATCACCATCCACCTAAAAAATTTCCAAAGAGAGGGCAAACAAGCAC
ATGAAATGTGTGTGCTCCCCCCTCCCTCCCACTTTCAAACAGCAAACTGA
TATAGATAAACACACAAA
Run BLAST on NCBI

transcript from alignment at sc0002554:6510..6877

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00040769 ID=TCONS_00040769|Name=TCONS_00040769|organism=Clytia hemisphaerica|type=transcript|length=368bp|location=Sequence derived from alignment at sc0002554:6510..6877 (Clytia hemisphaerica)
TTTGTGTGTTTATCTATATCAGTTTGCTGTTTGAAAGTGGGAGGGAGGGG
GGAGCACACACATTTCATGTGCTTGTTTGCCCTCTCTTTGGAAATTTTTT
AGGTGGATGGTGATGTAATAGTAGGGGAGGATCTGCAAATTAACAtcaga
aaaggaaaataattgaTGGTGTTGCCTCAACCACCATGAGCAAAACCTgg
ggaatttcattttttctcaaattaacCCGGAGATAGCTAAAGCAAAAAGC
TGGTACGtacccaaaaattttgaaagtgtcaaaaaatgaaggtcttcaaa
tctctctaaGGGGTCATCGACAaaagattttcgaatttttttatcgGCAT
TTGGCCGAtaaagggggg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024844XLOC_024844Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00040769-exon-sc0002554-1491911889:6510..6877TCONS_00040769-exon-sc0002554-1491911889:6510..6877Clytia hemisphaericaexon
TCONS_00040769-exon-sc0002554-1510915933:6510..6877TCONS_00040769-exon-sc0002554-1510915933:6510..6877Clytia hemisphaericaexon
TCONS_00040769-exon-sc0002554-1575043694:6510..6877TCONS_00040769-exon-sc0002554-1575043694:6510..6877Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002554supercontigsc0002554:6510..6877 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.22313	0	2.02112	1.48301	0.300904	0	0	0.537127	0.564083	0.232903	0	0.148604	0.296794	0	0.760205	0.679847	0.335006	0.343371	0	0.248205	0.215735	0.315684	0.511674	0	0	0.641419	1.83574	0.653049	0.247657	0.756971
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00040769 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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