TCONS_00039465 (transcript) - C. hemisphaerica

Overview
NameTCONS_00039465
Unique NameTCONS_00039465
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length176

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00039465 ID=TCONS_00039465|Name=TCONS_00039465|organism=Clytia hemisphaerica|type=transcript|length=176bp
ATAAAATATGTACATGTCTCTTTTGACGATGCAAATAAAATGTTAGCTCA
AGTTATGTACTAATAATACTATGTGCtgataaaaataagtaaactAATAT
TTCCCTAATTAGTTTAGTAGTCAGTGAATGAGAAAACGGAAGGGAAACAC
ACGAAGAATAGTTCAGAGAACCAGTG
Run BLAST on NCBI

transcript from alignment at sc0002117:17738..17913

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00039465 ID=TCONS_00039465|Name=TCONS_00039465|organism=Clytia hemisphaerica|type=transcript|length=176bp|location=Sequence derived from alignment at sc0002117:17738..17913 (Clytia hemisphaerica)
CACTGGTTCTCTGAACTATTCTTCGTGTGTTTCCCTTCCGTTTTCTCATT
CACTGACTACTAAACTAATTAGGGAAATATTagtttacttatttttatca
GCACATAGTATTATTAGTACATAACTTGAGCTAACATTTTATTTGCATCG
TCAAAAGAGACATGTACATATTTTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_023821XLOC_023821Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039465-exon-sc0002117-1491911889:17738..17913TCONS_00039465-exon-sc0002117-1491911889:17738..17913Clytia hemisphaericaexon
TCONS_00039465-exon-sc0002117-1510915933:17738..17913TCONS_00039465-exon-sc0002117-1510915933:17738..17913Clytia hemisphaericaexon
TCONS_00039465-exon-sc0002117-1575043694:17738..17913TCONS_00039465-exon-sc0002117-1575043694:17738..17913Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002117supercontigsc0002117:17738..17913 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00039465 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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