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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95430_evm1 >transcript:BL95430_evm1-protein ID=transcript:BL95430_evm1-protein|Name=transcript:BL95430_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=341bp
MVETSKPVAIHHNPRGKNESIACVIENSLGDGCQGLGFASLVLQTIDDIT
TCLARGFVPTVIWTECDYCGPPGNGQNYWTWYFEGRDQDIIQQAKTRVCI
GPTRIPDASRPSVYLTRSGAMGELVDFRFADMENKVTEYFQPITAETRAL
VNHVISGYLQPAARVKNTVDTFYQSSMANSVNIGVHVRLKAGHAKEMALY
DQTPPKLQDFVQVVQRLTNDIAATNSGREIRIFLASDLDEVIEEFKSKFG
DNRVLHIGAFRGEKLEDQWEKRSSGQQLGDQVFSDILLMTKCDYFVHDES
NVASVVYYFNPNLKSYYVNGDASDFRRLNAQPRFDSGRCQH Run BLAST on NCBI mRNA from alignment at Sc0000039:2257504..2261586- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95430_evm1 ID=transcript:BL95430_evm1|Name=transcript:BL95430_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=4083bp|location=Sequence derived from alignment at Sc0000039:2257504..2261586- (Branchiostoma lanceolatum)
ATGGTAGAGACCTCTAAACCAGTTGCCATCCACCACAACCCCAGAGGGAA
GAACGAGAGCATCGCCTGTGTCATCGAAAATTCTCTCGGAGATGGTTGCC
AAGGACTGGGGTTTGCCTCCCTCGTTTTGCAGACGATAGACGACATCACA
ACATGTCTTGTAAGTGTGTCTGTTATATTTTCACATGACCAGATGGCGTC
GACCAATCAGAAGCCTCCATTGCCCATGTGTTAATCGCCATAACACACCC
GTGATCATCAGTCCTCCCATTATGTAGAGGATAACACACCCGTGATCATC
ATTCCTCCCATTATGTAGAGGGGGGGTGTATCTTTTTGTTAACAATCGTA
TGTTTATTTGTTCCCAAAAATGCTTATTGCCTTAATAGAATAAATCAAAT
CTTTTGTAAGCAGATAACGAAATAGAATAAACCATTTCAATACAAGTCAA
ATCTAAACGGGCGGATCTGTAAGTGGAGCCGCCCATAGCATTGTTAGAAT
AACACCCAGCAGGGAGGACTGACGATAATAGATAATAGATTTAAAGAAGA
TTTGACATGCCAATATTGCAATGTTATTGAATATTATCTTTGGAAATGTT
GGTTTTCAAAATGAAATCTATCATCTTCTGTTCAAATAGAACAAATGTAA
ATTCTGAAATGCATTCTTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAATACAACGTATTAAAACGCATGTATTCAAACTTTTCCTTGAGCTCAAA
GTGCACCGCACTGCTACAATTAAAATCAAGGTCACCATCAAGTTGGGGGA
AAATAACACTTGTTTCCCACATACAGGCACGTGGATTCGTTCCAACGGTC
ATTTGGACAGAGTGTGACTACTGCGGGCCGCCTGGAAACGGACAGAACTA
CTGGACTTGGTACTTTGAAGGTAGTGAGTTCACTCGAACAATGTTTAGCA
GCTATCTATCTAACTATAAATAATATACACAACAGTTGGACATAAACTCA
GATATTTAGTTGTACTGGATTCCTTTCATGGATTAAAAGCGATCCTATTA
AGCAGTTGCAGTACTGCATCACAGCACCTCGGAGAATGCTGCAGTACTGC
ACTGTATTAATAGATAATAACTTTATTGCACAACAACTGTACAAGGTACA
AAGTATGACATTCACTGGTACATAGATAACATTCTATTAGGCTAATCAGT
CTATCTTATACAATATGGTTCTAGTAGTATGGGATGACAATGGGATTTTA
CAATCATTGGAGGAGTTTCTAACGTCTAGACATTCTTTGATATACTTCCC
AATGTATACCATACATGGGTTGTCACATTTCATTATGTACTTAAATTTGC
TGATATATAGCGCTTTTGATCCATGAAAAGGTCACCGTTAGTTGTACACA
GCCGTTATGGTCAAGTTTAGAAGCTATCTATATAACTATGAAAATTAAAT
AATATACACAACAATTTAATAAAAGCTTGGAACTAGATTTTACACAGAGC
TTCATAAATACAGATACAGAACAATAACGCTTGTAATTTCTGTACTTTGC
TCACACGCACAGGTAGGGATCAAGATATAATACAGCAAGCGAAGACTCGA
GTGTGCATCGGACCCACCAGGATACCTGACGCCAGTCGTCCTTCGGTAGG
TGCATTTTTCTTCATATTTATAGTGTTCATAGGCCACACTGACGTGATTT
TATAGATGGTATCCTCTCTACGCCCAAATGATAAGAGCACGCATGAGAAA
AGGCGACAAAAAGATGCCTAAATTCTGACAAAAGATAATTTAACGCACAA
AACACGATAAGCAAGAAACCTTTTATCATTGTTCTTTCATCGGGAGGTTG
GTTTTTAAGAAGACCGCGATGTCACGGAAATTTAGCCCAACAAGCAGCTA
CTCCACCACTGATTAATCCACACACCGTATAGAGCAATTTAAAGGAAAAT
TGGATCTATCGATGGACAGACAACACTTATTAACATAGACGTTGCATTCG
TTGCCTGTTGTGAGATTTAATGTTAAATGATCTATATATCCGTTGATAAA
TTATGTCAGCTTCCCGTAATTAATTTTGTTGTTGTTGACTTGAATCAGGT
TTACCTGACTCGATCAGGAGCAATGGGGGAGTTGGTGGATTTCCGGTTTG
CAGACATGGAAAACAAGGTGACGGAATACTTCCAACCAATAACAGCAGAG
ACCCGGGCTCTTGTCAATCACGTCATATCCGGTTATCTCCAGCCAGCCGC
TCGAGTCAAGAACACCGTGGATACTTTCTACCAATCCTCCATGGCGAACA
GTGTTAATATAGGTAGGTACTATACATTGTATATCACACTTATTTTCCTG
CATCTTTCTTCAGTTTATCACATGTATGCACACTTATACATCCTACAAGT
GATATTTAAATGTACACTGCAACACGACCAAAATGAATATCTAGTTGTAT
TACATGCGTAGCTTTAGCTTGTCATTGTTTTTGTACAAAGGTACTAAAGG
TGCATGGATATATGAGTTTGCACAGTCAAACCAGAAAAAGTCATCACACA
CATACACACACACAAATGCTCAGTTACACGCATATCTACACACACATTCA
CACGCACTTCTACACATACATGAACAAACACAAATACGTACACACACACA
CACACACATATATAAATACACACAAAACTCCTTGTAGCTCAATTAAACAT
GAATATGGTGTGATTGTTTTTACAGGTGTCCACGTGAGACTGAAAGCAGG
TCATGCTAAAGAGATGGCACTCTATGACCAGACGCCTCCAAAACTGCAAG
ACTTTGTCCAAGTCGTGCAACGTCTTACAAACGACATCGCCGCAACAAAC
TCCGGCAGAGAGATCCGCATATTCCTGGCCTCTGATCTTGACGAAGTTAT
CGAGGAATTCAAGTCCAAGTTTGGGGACAACAGAGTCTTACACATCGGCG
CTTTCAGGGGAGAAAAATTAGAAGACCAATGGGAAAAGAGAAGCTCTGGA
CAGCAGTTAGGAGATCAGGTGTTCAGTGACATTTTGCTGATGACAAAGTG
TGACTACTTTGTCCATGATGAGTCAAACGTCGCTTCTGTGGTGTACTACT
TCAACCCTAACCTTAAGAGCTACTACGTCAATGGAGACGCCTCAGACTTC
AGACGACTTAATGCGCAACCTCGTTTTGATTCTGGTGAGCTTTTTCGTCA
GGCCGTTGCCAGGGAGACGCGCAATCTAAACCTTTCTAATTGGTGGGATG
TCTCGTCTTGGGCTCATCTTGAAACCTGGGTTAGAGTGCTGTGGGGATTT
CTGTTCACAGAAACGGGAACGAACATTGAACAGCTTAAGTGTTACTACAA
GAACATGAAATGGAGCAAATGTCGTAATGAGTTTGTAAGATCAAAGTTTG
CCAGCAATAGTGACATGAAGAAATTGATGGGTCTGTGAAGCTGTTGAAAT
ATGTATCAGGGCTTGAAATACATTGCACGGAATAGGTGCAAAAGAGAATA
AAGATTTTGGTTGCACAGCATAAAATAAAATAAAATACAATTTTGTGTAT
TAAAGGCAATATGTGATATTTCTGATACGCTACAAGACCACATTTCCAAA
AGGAGTAATATGAATTAAATGACACAATACAAGGCCACTCTTTCATCTGG
AATTTTGTACAAGTGTAAAGCATACATTCTATGATGTGATATAAAAAGTG
TTTTTTCCCTATATGAATTCACAAATATAAAGATAACAATATCCTCTGTT
TCGAAAGGAGCAGGAAACACAAACCCGTCATTCTTGATATTTCTTTTACA
ATAAAAGTGTTCCTCATTCTAAAAATTGTTCATCTCTTTTGTGTGTGAAG
ATTTCTTACACAGAAGTAGACAATTTGAATGCATGGTGTTAAGTGGTGTA
ATCAATAAGATGTATATGAAGTTTTCTTGACATTTCCGATGAAAACATAA
TTACGACAGTATCGCTGCGGCGTTTGATGTACAGTTTCGCTAGGGATCAT
TTTGGTTATTTTTATATGCATGAGCTCAGCTTATTAGTTGCTGGTCTGTC
TGTTATCACCCGACAGGGCGCTGTCAGCACTGA Coding sequence (CDS) from alignment at Sc0000039:2257504..2261586- >transcript:BL95430_evm1 ID=transcript:BL95430_evm1|Name=transcript:BL95430_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=6156bp|location=Sequence derived from alignment at Sc0000039:2257504..2261586- (Branchiostoma lanceolatum)
ATGGTAGAGACCTCTAAACCAGTTGCCATCCACCACAACCCCAGAGGGAA
GAACGAGAGCATCGCCTGTGTCATCGAAAATTCTCTCGGAGATGGTTGCC
AAGGACTGGGGTTTGCCTCCCTCGTTTTGCAGACGATAGACGACATCACA
ACATGTCTTGCACGTGGATTCGTTCCAACGGTCATTTGGACAGAGTGTGA
CTACTGCGGGCCGCCTGGAAACGGACAGAACTACTGGACTTGGTACTTTG
AAGGTAGGGATCAAGATATAATACAGCAAGCGAAGACTCGAGTGTGCATC
GGACCCACCAGGATACCTGACGCCAGTCGTCCTTCGGTTTACCTGACTCG
ATCAGGAGCAATGGGGGAGTTGGTGGATTTCCGGTTTGCAGACATGGAAA
ACAAGGTGACGGAATACTTCCAACCAATAACAGCAGAGACCCGGGCTCTT
GTCAATCACGTCATATCCGGTTATCTCCAGCCAGCCGCTCGAGTCAAGAA
CACCGTGGATACTTTCTACCAATCCTCCATGGCGAACAGTGTTAATATAG
GTGTCCACGTGAGACTGAAAGCAGGTCATGCTAAAGAGATGGCACTCTAT
GACCAGACGCCTCCAAAACTGCAAGACTTTGTCCAAGTCGTGCAACGTCT
TACAAACGACATCGCCGCAACAAACTCCGGCAGAGAGATCCGCATATTCC
TGGCCTCTGATCTTGACGAAGTTATCGAGGAATTCAAGTCCAAGTTTGGG
GACAACAGAGTCTTACACATCGGCGCTTTCAGGGGAGAAAAATTAGAAGA
CCAATGGGAAAAGAGAAGCTCTGGACAGCAGTTAGGAGATCAGGTGTTCA
GTGACATTTTGCTGATGACAAAGTGTGACTACTTTGTCCATGATGAGTCA
AACGTCGCTTCTGTGGTGTACTACTTCAACCCTAACCTTAAGAGCTACTA
CGTCAATGGAGACGCCTCAGACTTCAGACGACTTAATGCGCAACCTCGTT
TTGATTCTGGGCGCTGTCAGCACTGAATGGTAGAGACCTCTAAACCAGTT
GCCATCCACCACAACCCCAGAGGGAAGAACGAGAGCATCGCCTGTGTCAT
CGAAAATTCTCTCGGAGATGGTTGCCAAGGACTGGGGTTTGCCTCCCTCG
TTTTGCAGACGATAGACGACATCACAACATGTCTTGCACGTGGATTCGTT
CCAACGGTCATTTGGACAGAGTGTGACTACTGCGGGCCGCCTGGAAACGG
ACAGAACTACTGGACTTGGTACTTTGAAGGTAGGGATCAAGATATAATAC
AGCAAGCGAAGACTCGAGTGTGCATCGGACCCACCAGGATACCTGACGCC
AGTCGTCCTTCGGTTTACCTGACTCGATCAGGAGCAATGGGGGAGTTGGT
GGATTTCCGGTTTGCAGACATGGAAAACAAGGTGACGGAATACTTCCAAC
CAATAACAGCAGAGACCCGGGCTCTTGTCAATCACGTCATATCCGGTTAT
CTCCAGCCAGCCGCTCGAGTCAAGAACACCGTGGATACTTTCTACCAATC
CTCCATGGCGAACAGTGTTAATATAGGTGTCCACGTGAGACTGAAAGCAG
GTCATGCTAAAGAGATGGCACTCTATGACCAGACGCCTCCAAAACTGCAA
GACTTTGTCCAAGTCGTGCAACGTCTTACAAACGACATCGCCGCAACAAA
CTCCGGCAGAGAGATCCGCATATTCCTGGCCTCTGATCTTGACGAAGTTA
TCGAGGAATTCAAGTCCAAGTTTGGGGACAACAGAGTCTTACACATCGGC
GCTTTCAGGGGAGAAAAATTAGAAGACCAATGGGAAAAGAGAAGCTCTGG
ACAGCAGTTAGGAGATCAGGTGTTCAGTGACATTTTGCTGATGACAAAGT
GTGACTACTTTGTCCATGATGAGTCAAACGTCGCTTCTGTGGTGTACTAC
TTCAACCCTAACCTTAAGAGCTACTACGTCAATGGAGACGCCTCAGACTT
CAGACGACTTAATGCGCAACCTCGTTTTGATTCTGGGCGCTGTCAGCACT
GAATGGTAGAGACCTCTAAACCAGTTGCCATCCACCACAACCCCAGAGGG
AAGAACGAGAGCATCGCCTGTGTCATCGAAAATTCTCTCGGAGATGGTTG
CCAAGGACTGGGGTTTGCCTCCCTCGTTTTGCAGACGATAGACGACATCA
CAACATGTCTTGCACGTGGATTCGTTCCAACGGTCATTTGGACAGAGTGT
GACTACTGCGGGCCGCCTGGAAACGGACAGAACTACTGGACTTGGTACTT
TGAAGGTAGGGATCAAGATATAATACAGCAAGCGAAGACTCGAGTGTGCA
TCGGACCCACCAGGATACCTGACGCCAGTCGTCCTTCGGTTTACCTGACT
CGATCAGGAGCAATGGGGGAGTTGGTGGATTTCCGGTTTGCAGACATGGA
AAACAAGGTGACGGAATACTTCCAACCAATAACAGCAGAGACCCGGGCTC
TTGTCAATCACGTCATATCCGGTTATCTCCAGCCAGCCGCTCGAGTCAAG
AACACCGTGGATACTTTCTACCAATCCTCCATGGCGAACAGTGTTAATAT
AGGTGTCCACGTGAGACTGAAAGCAGGTCATGCTAAAGAGATGGCACTCT
ATGACCAGACGCCTCCAAAACTGCAAGACTTTGTCCAAGTCGTGCAACGT
CTTACAAACGACATCGCCGCAACAAACTCCGGCAGAGAGATCCGCATATT
CCTGGCCTCTGATCTTGACGAAGTTATCGAGGAATTCAAGTCCAAGTTTG
GGGACAACAGAGTCTTACACATCGGCGCTTTCAGGGGAGAAAAATTAGAA
GACCAATGGGAAAAGAGAAGCTCTGGACAGCAGTTAGGAGATCAGGTGTT
CAGTGACATTTTGCTGATGACAAAGTGTGACTACTTTGTCCATGATGAGT
CAAACGTCGCTTCTGTGGTGTACTACTTCAACCCTAACCTTAAGAGCTAC
TACGTCAATGGAGACGCCTCAGACTTCAGACGACTTAATGCGCAACCTCG
TTTTGATTCTGGGCGCTGTCAGCACTGAATGGTAGAGACCTCTAAACCAG
TTGCCATCCACCACAACCCCAGAGGGAAGAACGAGAGCATCGCCTGTGTC
ATCGAAAATTCTCTCGGAGATGGTTGCCAAGGACTGGGGTTTGCCTCCCT
CGTTTTGCAGACGATAGACGACATCACAACATGTCTTGCACGTGGATTCG
TTCCAACGGTCATTTGGACAGAGTGTGACTACTGCGGGCCGCCTGGAAAC
GGACAGAACTACTGGACTTGGTACTTTGAAGGTAGGGATCAAGATATAAT
ACAGCAAGCGAAGACTCGAGTGTGCATCGGACCCACCAGGATACCTGACG
CCAGTCGTCCTTCGGTTTACCTGACTCGATCAGGAGCAATGGGGGAGTTG
GTGGATTTCCGGTTTGCAGACATGGAAAACAAGGTGACGGAATACTTCCA
ACCAATAACAGCAGAGACCCGGGCTCTTGTCAATCACGTCATATCCGGTT
ATCTCCAGCCAGCCGCTCGAGTCAAGAACACCGTGGATACTTTCTACCAA
TCCTCCATGGCGAACAGTGTTAATATAGGTGTCCACGTGAGACTGAAAGC
AGGTCATGCTAAAGAGATGGCACTCTATGACCAGACGCCTCCAAAACTGC
AAGACTTTGTCCAAGTCGTGCAACGTCTTACAAACGACATCGCCGCAACA
AACTCCGGCAGAGAGATCCGCATATTCCTGGCCTCTGATCTTGACGAAGT
TATCGAGGAATTCAAGTCCAAGTTTGGGGACAACAGAGTCTTACACATCG
GCGCTTTCAGGGGAGAAAAATTAGAAGACCAATGGGAAAAGAGAAGCTCT
GGACAGCAGTTAGGAGATCAGGTGTTCAGTGACATTTTGCTGATGACAAA
GTGTGACTACTTTGTCCATGATGAGTCAAACGTCGCTTCTGTGGTGTACT
ACTTCAACCCTAACCTTAAGAGCTACTACGTCAATGGAGACGCCTCAGAC
TTCAGACGACTTAATGCGCAACCTCGTTTTGATTCTGGGCGCTGTCAGCA
CTGAATGGTAGAGACCTCTAAACCAGTTGCCATCCACCACAACCCCAGAG
GGAAGAACGAGAGCATCGCCTGTGTCATCGAAAATTCTCTCGGAGATGGT
TGCCAAGGACTGGGGTTTGCCTCCCTCGTTTTGCAGACGATAGACGACAT
CACAACATGTCTTGCACGTGGATTCGTTCCAACGGTCATTTGGACAGAGT
GTGACTACTGCGGGCCGCCTGGAAACGGACAGAACTACTGGACTTGGTAC
TTTGAAGGTAGGGATCAAGATATAATACAGCAAGCGAAGACTCGAGTGTG
CATCGGACCCACCAGGATACCTGACGCCAGTCGTCCTTCGGTTTACCTGA
CTCGATCAGGAGCAATGGGGGAGTTGGTGGATTTCCGGTTTGCAGACATG
GAAAACAAGGTGACGGAATACTTCCAACCAATAACAGCAGAGACCCGGGC
TCTTGTCAATCACGTCATATCCGGTTATCTCCAGCCAGCCGCTCGAGTCA
AGAACACCGTGGATACTTTCTACCAATCCTCCATGGCGAACAGTGTTAAT
ATAGGTGTCCACGTGAGACTGAAAGCAGGTCATGCTAAAGAGATGGCACT
CTATGACCAGACGCCTCCAAAACTGCAAGACTTTGTCCAAGTCGTGCAAC
GTCTTACAAACGACATCGCCGCAACAAACTCCGGCAGAGAGATCCGCATA
TTCCTGGCCTCTGATCTTGACGAAGTTATCGAGGAATTCAAGTCCAAGTT
TGGGGACAACAGAGTCTTACACATCGGCGCTTTCAGGGGAGAAAAATTAG
AAGACCAATGGGAAAAGAGAAGCTCTGGACAGCAGTTAGGAGATCAGGTG
TTCAGTGACATTTTGCTGATGACAAAGTGTGACTACTTTGTCCATGATGA
GTCAAACGTCGCTTCTGTGGTGTACTACTTCAACCCTAACCTTAAGAGCT
ACTACGTCAATGGAGACGCCTCAGACTTCAGACGACTTAATGCGCAACCT
CGTTTTGATTCTGGGCGCTGTCAGCACTGAATGGTAGAGACCTCTAAACC
AGTTGCCATCCACCACAACCCCAGAGGGAAGAACGAGAGCATCGCCTGTG
TCATCGAAAATTCTCTCGGAGATGGTTGCCAAGGACTGGGGTTTGCCTCC
CTCGTTTTGCAGACGATAGACGACATCACAACATGTCTTGCACGTGGATT
CGTTCCAACGGTCATTTGGACAGAGTGTGACTACTGCGGGCCGCCTGGAA
ACGGACAGAACTACTGGACTTGGTACTTTGAAGGTAGGGATCAAGATATA
ATACAGCAAGCGAAGACTCGAGTGTGCATCGGACCCACCAGGATACCTGA
CGCCAGTCGTCCTTCGGTTTACCTGACTCGATCAGGAGCAATGGGGGAGT
TGGTGGATTTCCGGTTTGCAGACATGGAAAACAAGGTGACGGAATACTTC
CAACCAATAACAGCAGAGACCCGGGCTCTTGTCAATCACGTCATATCCGG
TTATCTCCAGCCAGCCGCTCGAGTCAAGAACACCGTGGATACTTTCTACC
AATCCTCCATGGCGAACAGTGTTAATATAGGTGTCCACGTGAGACTGAAA
GCAGGTCATGCTAAAGAGATGGCACTCTATGACCAGACGCCTCCAAAACT
GCAAGACTTTGTCCAAGTCGTGCAACGTCTTACAAACGACATCGCCGCAA
CAAACTCCGGCAGAGAGATCCGCATATTCCTGGCCTCTGATCTTGACGAA
GTTATCGAGGAATTCAAGTCCAAGTTTGGGGACAACAGAGTCTTACACAT
CGGCGCTTTCAGGGGAGAAAAATTAGAAGACCAATGGGAAAAGAGAAGCT
CTGGACAGCAGTTAGGAGATCAGGTGTTCAGTGACATTTTGCTGATGACA
AAGTGTGACTACTTTGTCCATGATGAGTCAAACGTCGCTTCTGTGGTGTA
CTACTTCAACCCTAACCTTAAGAGCTACTACGTCAATGGAGACGCCTCAG
ACTTCAGACGACTTAATGCGCAACCTCGTTTTGATTCTGGGCGCTGTCAG
CACTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000039 | genome | Sc0000039:2257504..2261586 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95430_evm1 |
| Biotype | protein_coding |
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