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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037726 ID=TCONS_00037726|Name=TCONS_00037726|organism=Clytia hemisphaerica|type=transcript|length=1359bp
ggattgttaagatatgacaagattagagatcatatggcccaaaggcgatt
ccaaagctattatcatcgaattacagcttcatGGAAAtgacaattaaaaa
cataaataaaatctaaatctaaaacattaaaaactgttttgtatatattt
tttattcgggtctgtaaattttcaaacgaagccaagaagggAGACAAAAT
GGTGCCAGGTCTCtggagaagtaacaaagttcagtacctttggaaaaaag
gctattgtggctgaagtttgaaaggaatcttaaattttattacatggaat
cattagcaagatgttgtaatagttatttccacattaaacaggtttcagat
ttcaaaagtttgggcaaaaagaggtaccccataacctagcccaattggct
accccattggctaccctgctttttagaccaacccgaaATCTCCTGAATCT
CCTGGTTGTTGTTGGGGTTTCGATTATGTACTACTTGCTCATTTTCTCCA
TAATAGCATTGTTCTTGAAACTGATAGAATTCCAGATAAAAAACCCAACG
CTTCTTTCAACTCTTCTGGCAGTATGCTGATGTGAGTGTTATTGTTTTCC
ATTTCCAAATTATAAACATATAATTTCCATAAGAAAATCTGATCTTGTTG
TTTCACAACTAAAGTCAGGTCGATATTTGATGACTCCCTGACCCTGACGA
AGGAGTGATTTTCCAAATGAGGAACATACAAAAAACCAAATTTCTCTGCA
GCCTCTCTGATGTGGTTGATTGAGAATTTTCTTATTTCAGAAACTGAATA
ATTATTCGCTGCCAATATGAACCACTATATACAAACTAAACAGTTCTCAA
TTGTGTGGTGGTCAAACAAAACCATTGACTGAATTTGATAGTCTTTTTTG
TGGTCcacttttctcaattttttcacaCAATTGCAGCACAAGTATTCAGG
ATCCTTGGACTTTTCATCATCAGCAATATCATAATCAAATAAAGttctaa
ttttaattttaaattctgAGATGTGTTTAGCATTTCTATAGTTTGCTTGA
TATTTAATCTTTGATGCACAAAGTCTGCAAATCTTATCGAGTATTTCACA
ATGATTCTCCATCGATCCTAGAGATTCTAAcacaattcaaaaaataaacg
ACCATGAAACAAACAACGACATTTTAAAGGATAAGCCACTTTCAAGGCTG
CACCACGACATATTACTCTGCTTTCCAGCTGGATTCTGGTTTCTTGATCT
AATTTTTGCTTTATTATTACACGTGATCGTGTTATAATAGAGTGGGGAAA
AGATCGGGAGAAAATAAAAACCACGTGATAATCAAAATTAGAAGATACGC
AACGTTGTT Run BLAST on NCBI transcript from alignment at sc0001700:43080..44507- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037726 ID=TCONS_00037726|Name=TCONS_00037726|organism=Clytia hemisphaerica|type=transcript|length=1428bp|location=Sequence derived from alignment at sc0001700:43080..44507- (Clytia hemisphaerica)
GGATTGTTAAGATATGACAAGATTAGAGATCATATGGCCCAAAGGCGATT
CCAAAGCTATTATCATCGAATTACAGCTTCATGGAAATGACAATTAAAAA
CATAAATAAAATCTAAATCTAAAACATTAAAAACTGTTTTGTATATATTT
TTTATTCGGGTCTGTAAATTTTCAAACGAAGCCAAGAAGGGAGACAAAAT
GGTGCCAGGTCTCTGGAGAAGTAACAAAGTTCAGTACCTTTGGAAAAAAG
GCTATTGTGGCTGAAGTTTGAAAGGAATCTTAAATTTTATTACATGGAAT
CATTAGCAAGATGTTGTAATAGTTATTTCCACATTAAACAGGTTTCAGAT
TTCAAAAGTTTGGGCAAAAAGAGGTACCCCATAACCTAGCCCAATTGGCT
ACCCCATTGGCTACCCTGCTTTTTAGACCAACCCGAAATCTCCTGAATCT
CCTGGTTGTTGTTGGGGTTTCGATTATGTACTACTTGCTCATTTTCTCCA
TAATAGCATTGTTCTTGAAACTGATAGAATTCCAGATAAAAAACCCAACG
CTTCTTTCAACTCTTCTGGCAGTATGCTGATGTGAGTGTTATTGTTTTCC
ATTTCCAAATTATAAACATATAATTTCCATAAGAAAATCTGATCTTGTTG
TTTCACAACTAAAGTCAGGTCGATATTTGATGACTCCCTGCCTGACCCTG
ACGANATCTGATCTTGTTGTTTCACAACTAAAGTCAGGTCGATATTTGAT
GACTCCCTGACCCTGACGAAGGAGTGATTTTCCAAATGAGGAACATACAA
AAAACCAAATTTCTCTGCAGCCTCTCTGATGTGGTTGATTGAGAATTTTC
TTATTTCAGAAACTGAATAATTATTCGCTGCCAATATGAACCACTATATA
CAAACTAAACAGTTCTCAATTGTGTGGTGGTCAAACAAAACCATTGACTG
AATTTGATAGTCTTTTTTGTGGTCCACTTTTCTCAATTTTTTCACACAAT
TGCAGCACAAGTATTCAGGATCCTTGGACTTTTCATCATCAGCAATATCA
TAATCAAATAAAGTTCTAATTTTAATTTTAAATTCTGAGATGTGTTTAGC
ATTTCTATAGTTTGCTTGATATTTAATCTTTGATGCACAAAGTCTGCAAA
TCTTATCGAGTATTTCACAATGATTCTCCATCGATCCTAGAGATTCTAAC
ACAATTCAAAAAATAAACGACCATGAAACAAACAACGACATTTTAAAGGA
TAAGCCACTTTCAAGGCTGCACCACGACATATTACTCTGCTTTCCAGCTG
GATTCTGGTTTCTTGATCTAATTTTTGCTTTATTATTACACGTGATCGTG
TTATAATAGAGTGGGGAAAAGATCGGGAGAAAATAAAAACCACGTGATAA
TCAAAATTAGAAGATACGCAACGTTGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00037726-exon-sc0001700-1575043694:43840..44507 | TCONS_00037726-exon-sc0001700-1575043694:43840..44507 | Clytia hemisphaerica | exon |
| TCONS_00037726-exon-sc0001700-1575043694:43080..43770 | TCONS_00037726-exon-sc0001700-1575043694:43080..43770 | Clytia hemisphaerica | exon |
| TCONS_00037726-exon-sc0001700-1510915933:43840..44507 | TCONS_00037726-exon-sc0001700-1510915933:43840..44507 | Clytia hemisphaerica | exon |
| TCONS_00037726-exon-sc0001700-1510915933:43080..43770 | TCONS_00037726-exon-sc0001700-1510915933:43080..43770 | Clytia hemisphaerica | exon |
| TCONS_00037726-exon-sc0001700-1491911889:43840..44507 | TCONS_00037726-exon-sc0001700-1491911889:43840..44507 | Clytia hemisphaerica | exon |
| TCONS_00037726-exon-sc0001700-1491911889:43080..43770 | TCONS_00037726-exon-sc0001700-1491911889:43080..43770 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001700 | supercontig | sc0001700:43080..44507 - |
Blast
The following BLAST results are available for this feature:
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